BGIOSGA016732

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Revision as of 04:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016732| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016732, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA016732

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016732, complete gene.

LocusTag

OSJNBB0002J11.20

Ensembl Transcript ID

BGIOSGA016732-TA

Ensembl Protein ID

BGIOSGA016732-PA

Length

2847

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24027498..24030344

Sequence Coding Region

24027498..24027744,24027851..24027978,24028061..24028303,24029723..24029975,24030109..24030344

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24027498..24030344 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24027498..24030344 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCTTCTTCTTTGGTTGGATTCCTCATGGCGGCGGTGGCGGCGCTGCTCGTGGCCGCCGCGACGCCGGCGGCGGCGGCGCCGAGGGCGTTCTTCGTGTTCGGGGACTCGCTCGTGGACAACGGCAACAACAACTACCTCATGACGACGGCGCGCGCGGACGCGCCGCCGTACGGGATCGACTTCCCGACGCACATGCCCACGGGGAGATTCTCAAACGGGCTCAACATCCCGGACATCATCAGCGAGTACCTCGGGTCCCAGCCTGCTCTGCCGTACCTGAGCCCGGACCTCCGAGGCGAGAACCTTCTCGTCGGCGCCAACTTCGCCTCCGCCGGCGTCGGCATCCTCAACGACACCGGCATCCAGTTCGTGAACATAATTAGGATCGGTCAGCAGCTGGACAACTTCGAGAACTACCAGCGGAATCTGGCGGCGTTCGTCGGCGAGGACGCGGCGAGGCAGGTGGTGCAGCAGTCGCTCGTGCTCATCACGCTCGGCGGCAACGACTTCGTCAACAACTACTACCTGGTGCCATTCTCCGTCAGGTCCCGACAGTTCGCCATCCAGGATTACGTCCCCTACCTCATCTCCGAGTACAGGAAGATCCTCACGAGGCTGCACGATCTGGGTCCGCGTCGGGTGATCGTGACGGGCACCGGGATGATCGGGTGCGTGCCGGCGGAGCTGGCCATGCACAGCATCGACGGCGAGTGCGCCACCGACCTGACGCGCGCCGCCGACCTCTTCAACCCGCAGCTGGAGCGCATGCTCGCCGAGCTCAACTCCGAGCTCGGCGGCCACGTCTTCATCGCCGCCAACACCAACAAGATCAGCTTCGACTTCATGTTCAACCCCCAGGACTACGGGTTTGTGACGGCGAAGGTGGCGTGCTGCGGGCAGGGGCCGTACAACGGTATCGGGCTGTGCACGCCGGCGTCCAACGTGTGCGCGAACCGGGACGTGTACGCGTACTGGGACGCGTTCCACCCGACGGAGCGGGCGAACCGGCTCATCGTCGCGCAGATCATGCACGGCTCCACCGACCACATCAGCCCCATGAACCTCAGCACCATCCTCGCCATGGACGAGAGGAGGAATTGA</cdnaseq>

Protein Sequence

<aaseq>MGASSLVGFLMAAVAALLVAAATPAAAAPRAFFVFGDSLVDNGNNNYLMTTARADAPPYGIDFPTHMPTGRFSNGLNIPDIISEYLGSQPALPYLSPDLRGENLLVGANFASAGVGILNDTGIQFVNIIRIGQQLDNFENYQRNLAAFVGEDAARQVVQQSLVLITLGGNDFVNNYYLVPFSVRSRQFAIQDYVPYLISEYRKILTRLHDLGPRRVIVTGTGMIGCVPAELAMHSIDGECATDLTRAADLFNPQLERMLAELNSELGGHVFIAANTNKISFDFMFNPQDYGFVTAKVACCGQGPYNGIGLCTPASNVCANRDVYAYWDAFHPTERANRLIVAQIMHGSTDHISPMNLSTILAMDERRN</aaseq>

Gene Sequence

<dnaseqindica>1..247#354..481#564..806#2226..2478#2612..2847#ATGGGCGCTTCTTCTTTGGTTGGATTCCTCATGGCGGCGGTGGCGGCGCTGCTCGTGGCCGCCGCGACGCCGGCGGCGGCGGCGCCGAGGGCGTTCTTCGTGTTCGGGGACTCGCTCGTGGACAACGGCAACAACAACTACCTCATGACGACGGCGCGCGCGGACGCGCCGCCGTACGGGATCGACTTCCCGACGCACATGCCCACGGGGAGATTCTCAAACGGGCTCAACATCCCGGACATCATCAGTTAGCACCTTATCCATCACTGTCACTTGTAAAAAGAAACACAATGCAATGCACAAAGTTAGTTACAACTGTTCTTGACACGCTGCATTTTTTTTTTTGGGCTCAGGCGAGTACCTCGGGTCCCAGCCTGCTCTGCCGTACCTGAGCCCGGACCTCCGAGGCGAGAACCTTCTCGTCGGCGCCAACTTCGCCTCCGCCGGCGTCGGCATCCTCAACGACACCGGCATCCAGTTCGTAAGCCCCCCCGCGCGCGCATCCGCCACCATTTTCGTCACGAACAAATGCGCATTAACGTTGTGTTTTGCTGTGGGTGCAGGTGAACATAATTAGGATCGGTCAGCAGCTGGACAACTTCGAGAACTACCAGCGGAATCTGGCGGCGTTCGTCGGCGAGGACGCGGCGAGGCAGGTGGTGCAGCAGTCGCTCGTGCTCATCACGCTCGGCGGCAACGACTTCGTCAACAACTACTACCTGGTGCCATTCTCCGTCAGGTCCCGACAGTTCGCCATCCAGGATTACGTCCCCTACCTCATCTCCGAGTACAGGAAGATCCTCACGGTTAGTCTCATCTCATCGATTCCAAGTTTCTTCTTGCTCTAGAGAATAATAAGTAGCCTCAATTAACTTCCGTGTTATCACCAAAGGTAGAATTTGGCAAATTTACGATTAGCATTTCAGTAGAGACTCAGCCGATCGAAGCAGATGAGCATAACTCACTTGCATAAAAGCAGTAGTAGAAAACAATGCTGCATGTTAACTGTTGGCACTGCAAACAATAGATAGAAAGTGCAGGCTGCAGCCTGCAGAGTGAACATATCCTGGTGTGGAGTCTCTTTTGGGTAATATGTTGTCAATGACATGACCTGTAATTTTTTCTGTATCAACCTGAGAAAGTTCCTGTTGAAAACAATAAGCCGAATACATTATGCAGTTCATCTCACACTATTTGCAGTCAGTGTCAGTAAGCCCCCATCTTCATCCTCCTGTCCACTGCAAAGGAAGAAAATAGAAGTATGGGTGGTCTGGTAGTAGTAATGTACTCCGTATACCAATACCTGTATCATCATCAACCGTTAATTTATGATTTACTGTTCTACTAGTAGTTAAGGCACATCGTAAATATATATGATCGTTAGATTAGAAAATATGAACGGTATAGATTGATTGTAGCGACTATTTAAAATACCTGTAAAAATACTTCCAGTTAGGACATTATGCTAACTTTAGCATCATTAAATTAAGAGCTCGAACTGCAACAAACAATTAACATGTCTGACAAGCAATATAAGTACAGTGTAATGCGAAAAAGGCTTCACGCCTTGCATTATCAGAAGTACAAGATTTTCATTACAAGGAGCAGTAAGCCAGTAAATGAAAATGGGCAAGTCACTGTATCAGATCTCTCTGCTTCAGATCTACACATTCCTTCACACTCTTGAGTTACTGTATGATTTATGAATAGCTTATTACTATGATCTATGGGGTTCAATGCCAATAGGCCTAAACATTTACTACTACTAGATCGGCTTCCCACCAAATAATTTCAAGAGGTAGGAGGTAGCAGTACATCTAGCACCCAAGTTTTACCGTACGGTGAGTCGGTGACAGTACTCTGTCTGACCGACTGTTCCTCCTCGTCGCCGTTCGGGTGGATGTATGCATGCTGTGTCACCTACCACACCTTCACTCTGCAGAGGCAATGAATATGCCAAGTAGGACAATTAACGCTGTAAAAAAAAACAAGCAGGATGCAGTCATCGTAGAGGGGGCTTGTTGTGTCATCGCATTTACTCACTCGTGTACCCGCGAGGCCATCGTGCCAAAATTTACTCATGCCACATGCAACGACAGTGCCAGTTGCCACTCGTGCAGACGTGCAGTGCTCGCAGCTTCGTGTACATGTAAATTGTATTTGTGTCCTTCGTCTTGAAAGGAAAAATGACATGACTGCGTCCGTGTATATGGTGGTGCATGCAGAGGCTGCACGATCTGGGTCCGCGTCGGGTGATCGTGACGGGCACCGGGATGATCGGGTGCGTGCCGGCGGAGCTGGCCATGCACAGCATCGACGGCGAGTGCGCCACCGACCTGACGCGCGCCGCCGACCTCTTCAACCCGCAGCTGGAGCGCATGCTCGCCGAGCTCAACTCCGAGCTCGGCGGCCACGTCTTCATCGCCGCCAACACCAACAAGATCAGCTTCGACTTCATGTTCAACCCCCAGGACTACGGTAACCAATTACCAACCAAGAACAAAAATTCAGAGATGAATCTGAACAGAAGTCGTTTTTAGAAGTTGGTTTTTTTCTGAGACAGACGGAAGATCCATGTAGATGATTTTGATGTGTTTGTGGGGGTTTGCAGGGTTTGTGACGGCGAAGGTGGCGTGCTGCGGGCAGGGGCCGTACAACGGTATCGGGCTGTGCACGCCGGCGTCCAACGTGTGCGCGAACCGGGACGTGTACGCGTACTGGGACGCGTTCCACCCGACGGAGCGGGCGAACCGGCTCATCGTCGCGCAGATCATGCACGGCTCCACCGACCACATCAGCCCCATGAACCTCAGCACCATCCTCGCCATGGACGAGAGGAGGAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016732