BGIOSGA016741

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Revision as of 04:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016741| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016741, complete gene.| tag = OsI_165...")
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Gene Name

BGIOSGA016741

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016741, complete gene.

LocusTag

OsI_16589

Ensembl Transcript ID

BGIOSGA016741-TA

Ensembl Protein ID

BGIOSGA016741-PA

Length

9228

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24102110..24111337

Sequence Coding Region

24102110..24102161,24102665..24102742,24103148..24103201,24103283..24103384,24103473..24103558
,24103662..24103765,24104180..24104248,24104329..24104443,24110918..24111337

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24102110..24111337 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24102110..24111337 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACATTCATGACTTGTTCCACTTTGTTTATTATATACTTTAAGCCCACCTATGAAACAAGAGTTAAAGAGTTCAAACTCAAGTCAATGTGGAGGAGCCCAAATGGCACCATCAGGAATATTCTAAATGGAACTGTTTTCCGGGAGCCCATCTTGTGTAAAAATGTACCACGGATACTTTCTGGCTGGAAGAAGCCCATTTGCATTGGAAGGCATGCATTTGGAGACCAGTATCGAGCTACTGATACAATAATTAATGGTCCAGGAAAGCTTAAAATGGTTTTTGTCCCAGATGGTGCTGAACCTGTGGAGTTAAATGTTTATAATTTTAAAGGGCCTGGTGTGGCTTTATCAATGTATAATGTGGATGAGTCTATTAGAGCTTTTGCTGAGTCATCAATGGCAATGGCACTTTCCAAAAAATGGCCTCTTTATCTCAGCACCAAGAACACAATATTGAAGAAATATGATGGCAGGTTCAAGGACATCTTCCAGGAGGTATATGAAGAGAAATGGAAGGAGAAGTTCGAGGAAAACTCGATATGGTATGAGCACCGGTTGATTGATGACATGGTGGCATATGCTGTGAAAAGTGAAGGTGGATATGTTTGGGCTTGCAAAAACTATGATGGAGATGTTCAGAGTGACTTCCTTGCCCAGATTTTTCTAACCCTCAAGAACAGTAGAGATACGCGGACGGCGGTGGAGGCAGCGACAGCGGCGCTCGGACGGAGGATCGGCGGCGGCGCGTGGACGAAGGACCGACAGCGTGGGCAGCATGGGGTCGGCGCGGACGGGGGTTGTGGCATCGTCGCGGATGGAGGTGGTGGTGGCGACGTCTTCCTGGCCGCGGAGGGGGTGGCGTCGAGGACAAAGGGGGCCAAGAAAGGAGAGCGCGACGAACGGGCCGGTCTGCAGCGGGACGACGGCGCCCCTCCCATGCTCTGCTTGCGAGTTGCGACTCGCGATATGGGGATCGGAGCGGAGGCGGTGATGGGGGCGACGGCGCCAGTCTACAGCGGCCTGGAAGGGGTGGCGGCCTTGTGGGATTTGAGCGGAGATCGCGGGTGCGACGATTAG</cdnaseq>

Protein Sequence

<aaseq>MTFMTCSTLFIIYFKPTYETRVKEFKLKSMWRSPNGTIRNILNGTVFREPILCKNVPRILSGWKKPICIGRHAFGDQYRATDTIINGPGKLKMVFVPDGAEPVELNVYNFKGPGVALSMYNVDESIRAFAESSMAMALSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEEKWKEKFEENSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDFLAQIFLTLKNSRDTRTAVEAATAALGRRIGGGAWTKDRQRGQHGVGADGGCGIVADGGGGGDVFLAAEGVASRTKGAKKGERDERAGLQRDDGAPPMLCLRVATRDMGIGAEAVMGATAPVYSGLEGVAALWDLSGDRGCDD</aaseq>

Gene Sequence

<dnaseqindica>1..52#556..633#1039..1092#1174..1275#1364..1449#1553..1656#2071..2139#2220..2334#8809..9228#ATGACATTCATGACTTGTTCCACTTTGTTTATTATATACTTTAAGCCCACCTGTAAGATCTGCAACAATGAAAGCAGTCACTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGTTCTCTGAATATTTTCCCTGTCAGCTGGTTTTGATGAGTTCAAAAGTTACATTTTAATTTTCTTATGATCCCCACTATTTTCATGATGCAGTACTAGCATTATTTTGCTAGAGCCATAGTAAAAAATGTTATATATGTGACAATCTTTGAGAAAAACTATTCCGCATACTTCAAAAGAAACAAATTAAAGGTTCTATACTTTGTAATACTTATTTGAGTTATTTGAGCTGTCAGCAAAGCCAACTATGATTAGCCACCTTTTCCTGGGCTACGCAATTCTACCTTAAATGAAGTTGATAGTACCTATAGATATACTATTTCTGAACTTCTTTTGGTTGAGTGTATGTAGATTGTATTTTTAATCTTGGGTACTTTGTTTGTCTTATTTTCCTCTTCTCTTTATGCCTATATGCAGATGAAACAAGAGTTAAAGAGTTCAAACTCAAGTCAATGTGGAGGAGCCCAAATGGCACCATCAGGAATATTCTAAATGGTTAATTTTTCAACTCTTGAGATGTCTTTGATCTTTTATTTACTTGGTGAAATGATTCTCGAACTGAATTGACATGCACTCTGTGAATTTTGTTAGTGGGATAAATTTAAATTTCTAGTTAATGCTTATAATAAAATTTTATGGGGTCAAAATTGAGAATTCTGGTTGCCTTAATGTTGGAAATTTTACACACACATATTTTCATATGTACTATACTTCATCCTAATGTGGAGTGTTTAAATATACCTGTAGATTCTGACAAGTAGCAATAACATGAAATTTACTTGAAATATACTTATTTTAGCACAGATACTGATAATCCTGAGTAGCAATAATATGTCAGGAACTGCAACAATATAAAAAATATTCTGTACCATGATCACTAATGTTCACCATGACATACAGGAACTGTTTTCCGGGAGCCCATCTTGTGTAAAAATGTACCACGGATACTTTCTGGTAAGGAATTATTGAAATATTGTCATGGGAACAAGTGACTAAGTGACTGTTTTCCAGACTAAAGGTAATTTTCTTCTATAGGCTGGAAGAAGCCCATTTGCATTGGAAGGCATGCATTTGGAGACCAGTATCGAGCTACTGATACAATAATTAATGGTCCAGGAAAGCTTAAAATGGTTTTTGGTGAGCTTCAGTTGACAGCTACTTATTTGTATACCATCTAAAGCTGTTTTGTTGCTCATCAGTTTGTTCTTTTGGTACTGAAAATCAGTCCCAGATGGTGCTGAACCTGTGGAGTTAAATGTTTATAATTTTAAAGGGCCTGGTGTGGCTTTATCAATGTATAATGTGGATGAGGTATGATAGAAAATCAATGCAGTTCACTGCCTTATTATTCTCTTGAAAGCTATGCTAACTTTTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACAGTCTATTAGAGCTTTTGCTGAGTCATCAATGGCAATGGCACTTTCCAAAAAATGGCCTCTTTATCTCAGCACCAAGAACACAATATTGAAGAAATATGATGGCAGGTATCTGGGATTGCCATTATTTCCAGTTATTTATTATGTACCAGTACTATAGTCAAGCACTCTTTTGTTGCCACAAGGAGTGCCTTCTGACTTCTATTGCAAAGTTACTCTCTTAACCTTTATCCTCTCGGTACACTGCTTCATACGTGTCTTTATGATTTCTCTGGTCTCTTAACAATTTATAAATTAGTATGAGGGGCACTAAATCTCATTGTAAATTAGTGGACAATAGCAGTGTACCGAGAGGATAAAGCACTCTTTAGTATGATGGTTATTGTCCTCGGTACATATGAAAATATCAAGCACTCTTTAGCATGATGGTTATTGTCCAATGATTTAAAAACCATACTGCAGCTGATTATATTATCATAAACAAGTCCAATCCTGACATAGGCAGTTTTGATATCACCAAAGGTTCAAGGACATCTTCCAGGAGGTATATGAAGAGAAATGGAAGGAGAAGTTCGAGGAAAACTCGATATGGTATGTGATATTTTACATTACCATATTTTACCACTAAAGTTCTTCGTGAATTCCAAACAATATTTCCCTCATGCACCCAGGTATGAGCACCGGTTGATTGATGACATGGTGGCATATGCTGTGAAAAGTGAAGGTGGATATGTTTGGGCTTGCAAAAACTATGATGGAGATGTTCAGAGTGACTTCCTTGCCCAGGTTTGTGCTTTCTACTCTAGCTTTCATGAAGCTGAATGGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGAACTCCTCCAGCGAGACGTCGGCGTCGGCCTCGACGAACGAGACCCCCTCGCCGGTGCAGTCCACCACGAGCTTCCCGCCGGGAAGCTCCCGGATCCTCCCGGCGATCGGGTAGTAGTGCACGAGCGCCGCCGCAAGCGCGCCGCGGATGACCCTGGCCGGGTCGCCGCCGCCGGACCGGTAGAAGTAGATGATGGAGCGGTAGAACCGGAAGCTGCGCTGGTCGTCGATGTCGGAGAGCCGCCGGAGCCCGCGCGGCGTCGGCCCGGCCGGCGCGACGAGCTCCGGGTCGCCTCGGCGCGCCGTGAAAGCCAGGCACGATGACGCCGCCATCGATCGATCGCCGTACGTTCGCCGGAGCTATAGCTTGACGATCGAGCTCACGCGCTCGGACACCGAAATGGCTCACGTAGTACGTTTTCCTCGTACCACGCATGCATCTAGCCAGCACGCGTATATAAAAGCGGGGGAGAGTCGGATCGGGCGGTGAAGATAGTTTGGTCACTGCATGCGTCGTTGAAGCGGCGTACGTTCTTTCTCGGTCCAAACTTTCTACTCCGAATAGATAATGCGCCGGTTAGAAATTCCTCAATCGGTCGAAGTCTCGAGGAGGGCACCGGGCGGTGACGGTGAGACGCCGTTGTGGCGACTTTAGAAACCTAGAATTTCCTCAGCCGGACCTGGTATGTTAGGCTGGTATACTTGCATGCCGTCCAGATTCCGAGACCGGAGATTCAATTAAATTAATACTAGTACGTTTAATTCTAACTGATCCTCTCTGCACACGGTGTTGCTCGGTCAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTGGGACAGAGGGAGTAAGTGGGGTTCTTCCGTCATTTCCGTGGCCATCACTTGACGGGGACAAAGAAGGGTCTGCTGCTGCTGGTCGTCGGGCTTAGCCAGGCTCGACCACCGCGGGGCGTGAAAGCATGATGTATGACTTGATCCCGAGAATGTACGGGACGACGAGGCTTAGCACGACTGCCCTCCTCAAGATGCCACCCTTGAGGTAGTAGCGAGAGAGAGAGAGAGAGAGGCGATGAAGAAGATGAGACGAGGAGAAGTCGTCGACAGATAGGTTCTACTTGCTGACTCAGCGAGTCAATCATGATCAACCTATCACGTCAGCGAAAACAGGTTCTCAGATCATTGGAGGATTCAATTTGAACCGGATTTTGAAAAATAGGGATGCGCTTTATCCATTTTTGTGGTTGATGAACGCGATTTAATCAGAAGCACGAGACGAGCAAGTCAAAATAGACTTTCTCGCATACTAATGGACTGGAGAAAGCATTTTGACTCCCTCCTATATTGGTTGAATATGATTCATACCACTCAGCTGTAAAATTGGGTATATCACCACTCACAAGAAACTGCTTTGAGAGTGATTTTAGTCGACATGGTTGTTCACGTGGCAGCTAGTTATCGAATAAATTTAAAAATTATGTGGGCCCATCCCTCCTATATCTATATCTCATATTCTCTTGTCTCAAAACAAATAAATCTAATACGGAATGTGATATCTAATGTCACGTCCTTTTATATCTCCTATCACATCTCGTAATAGGTTGGTTTATTCCACAAAAGGTTTGTTCCACGAAGTATGTCTCGATGTCATATGGCTGCGATGCTGACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACAGTCTATTAGAGCTTTTGCTGAGTCATCAATGGCAATGGCACTTTCCAAAAAATGGCCTCTTTATCTCAGCACCAAGAACACAATATTGAAGAAATATGATGGCAGGTATCTGGGATTGCCATTATTTCCAGTTATTTATTATGTACCAGTACTATAGTCAAGCACTCTTTTGTTGCCACAAGGAGTGCCTTCTGACTTCTATTGCAAAGTTACTCTCTTAACCTTTATCCTCTCGGTACACTGCTTCATACGTGTCTTTATGATTTCTCTGGTCTCTTAACAATTTATAAATTAGTATGAGGGGCACTAAATCTCATTGTAAATTAGTGGACAATAGCAGTGTACCGAGAGGATAAAGCACTCTTTAGTATGATGGTTATTGTCCTCGGTACATATGAAAATATCAAGCACTCTTTAGCATGATGGTTATTGTCCAATGATTTAAAAACCATACTGCAGCTGATTATATTATCATAAACAAGTCCAATCCTGACATAGGCAGTTTTGATATCACCAAAGGTTCAAGGACATCTTCCAGGAGGTATATGAAGAGAAATGGAAGGAGAAGTTCGAGGAAAACTCGATATGGTATGTGATATTTTACATTACCATATTTTACCACTAAAGTTCTTCGTGAATTCCAACAATATTTGGATCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCTTCATCAATGGGAAGCATATTGGTGGCTGTGATGGTGAACCCTTTTGCCTTTCATTCTTTGTCTCCAGTACTCTGTGCTTTTGTTAGTTTCTATATTGATTGTTGTCCATGAAGTCCATTATCTCTGCTTGCTCGCTCGCAATTTTATTAGTACTCTTCAGTGTTCAGTTAACGAATTACTGTTTGCTGTAAATGTCACTTGGGGCAGATACTTTGGCATTGAACAATGAAGGGAAGCTGGTGCCTCTGCTGACCGAGGCTGGAGCAATTGCCAGTTCTGCAAAGACGACAATCACCGCATAGTTCTTCGTGGGACACTGGGACTAGCCTTCGTTGACCTCTTTATACTGCATCCATTCTATTAGATAATAAAGGTGGATGTTTGTTTGGCAAGACCATTACTTGTTGCCGTCTAGTATCGTGTGATAGCTATCCTGTGCCCGTGTGAAACTCCTTGGACATCAATAATATCGTCTTTGTGATAGCAGTTCGCTGATATTAACTGTCGATTATAGTCTTTCTGCCGTGAGCATACATGGCTACGAAACACATGTTGGAGAGAAGCTATAAACGTCGAAACTGCATAGCTCCACACAATGCCCTGCAGGACAATCAGGGAGGCAAACAAATTTCAGAGGCAGAAAAGCCAAAAACGCAACAACAACTACCAACAAATTTAAGAGGCAAAAAGCCAAAAAACACAACCACAAGTCCTCAACTACTTGATTACAACTGTGAACTGGGGTAGCTTTACAATTGTGATGTGAGCTAATAGCAGCTTTACAATTGTGAATGAATGCGACAGGCAGAGGCACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTCCTGTATGAAAGCAAGCACTCTATTCCATCTACTAAGAGGCGCTCCCACCAAATTCCGCCTAAACGAAATATTCAGAGGGGACGAACTAAGTACTTTGGCCACAGAGTCATTTTTCCTTCTAACAATATTAAATAATGATGGAAATCTGTCCTTTAAAGGTTTATTACCCAGCCACGTATCGCACCAAAATCTCGTTTGCGATCCATCTTTGATTTTGAACGATCCCAAGCCCAGGAAAGTGTCTTTTATGCTCATTAAACCTTTCCAGAAGTGTGAATCCGTAGCCCTTTTCTGGCAACAACCTAGGGGCTTTTCCTTCAAGTATTTGTTCCTAATCAGTTCCTGCCAAAGTCCGTCCTCATTTAACAGTTTGAAAAGCCATTTGCTCAGTAAGCATTTATTTTGAATCTCTAAATTGGGGATACCTAGCCCCCCTTTAATCTTTGGTTGGCACATGACTGTCCATTTAGCTAGTCTGTATTTTTTCTTGTGCTGATCATTCTGCCAATAGAACCTTGATCTATAGCAGTCAATTTTTTCTAGCACACCTTTTGGAATTTCGAAGAAAGACAGCATAAACATCGGTAAGCTGGAAAGCACAGAGTTAATTAGTACGAGTCTCCCTCCGGCCGTTAGTAATTTTCCTTTCCAACCCCCCAACTTCTTTTCGATCCTATTTTCGATTTCTTGCCAATCTTTATTGTTAAGTTTTCTGGTATGCATGGGAAGACCAAGGTATCTAAACGGAAATGACCCAATCTTACACCCAAATAGCTGCGAATAAAAGGCTTCGTTCTCTTTTGCTCTACCAAAACAAAAGATTTCGCTCTTATGGAAATTTATCTTGAGGCCTGATAGTTGTTCACAGGTTGTAAGAATTACCTTCATATTAATCGCTTTGGCGACATCATGGCTCATGAAAATTACCGTATCATCCGCATATTGGAGTATCGACAGGCCATCCTGAATCAGGTGTGGGATAACACCCTCTACGCGGTCAGCGTTTTTGGCTCTAGCAATGAGAATCGCTAACATGTCGACAACTATATTAAATAGTACTGGCGACATCGGATCCCCCTGCCTCAAGCCCTTTTTGGATTGGAAATAATTACCAACTTGATCATTCACCTTTATACTGACATTACCCCCTTGAGTAAACTTCTCCACCCAACTGCACCATTTATGTGAAAACCCTTTCATTCTGAGAGTTTGTTGGAGAAAAGACCATCTAACTTTGTCATATGCTTTTTCAAAATCTATCTTAAAAATGACCCCATCTTGCTTCTTTGTGTGGAGTTCATGTAAAGTTTCATGAAGAATAATGGCCCCCTCCATTATATTTCTACCCGGTAAAAAAGCCGTTTGAGTTGGTTTAATCACTTTCTGAGCTACTGATGTAAGCCTATTAGTAGCCACTTTGGTAAAGATTTTAAAGGAGACGTTCAGGAGACAGATTGGTCTGTATTGCTGAATAGTCCTAACATCCTTCTGCTTGGGCAGTAGAATAATCGTACCAAAGTTTAGGCTATTTAGAGGCAACGATCCCTGCTGGAAATCCGAAAACAGAGCTAACAGGTCATCCTTTATAATTGTCCAGAAGGCCTGATAAAACTCTGGTGGGAAACCATCCGGACCAGGTGCAGTATTATGTTTCATTTGGAATATAGCACATTTTATCTCTTCTTCTGTAAAATCTGCCGTTAAAGACTCATTTTCTTCTGCAGAGACTTGTCGTATGTCGTCGACCTGAGACTCATCTAAAAAAATAGATGAAGTCTGTGATGGGCCGAACAGGGTCTTAAAGTACTTGGTGATGTGCTCCTTAAGTTGAGCATCACCAGTAATGACCTCGTTCCCATCCTGCAATTGGAAAATACGAGTTTTCCTGTGACGGCCATTTGCCAGAAGATGATAGTACTTTGTGTTAGCATCTCCTTCCAATAGGTGCTTGACCTTAGCACGTTGGTACCATTTAATTTCTTCCTCCCTCAATAACTCATCCAGTCTATCATTTAGAACATGCTTAACATTTAATTCAAACTCATTGAGTATAGTATGTTCAGCTTTCTTATCAAGTGTATCTAATTTATCCAATAACTCTTTCTTTTCTTTTTTGTAAGCACCAGTAATATTTTTCGCCCAACCTCGAAGAAATTGGCGTAATCGTCTAATTTTCCTCTGCCATCTCTCTAAAGGTGTACCCTCAATGGACACCCCTTGCCACACCTCCTTTACAATATCACTGAAACCGTCCCTCCGCAACCAGCCCAATTCAAATTTAAATTGAGGTTGGTAAGCTGCGGACGCACCGCCTGAATTGTATAGCAAAGGTGTATGATCTGAAATTTCCCTAGTGAGGATGCTAACAGTAGAGAGTGGGAATTTTGTCTCAAACTCCGTAGAAACTAGAATTCTGTCAAGCTTCTCAAAAGTTTGATTTTGTAAGTGATTTGCCCAAGTAAAAGATCTCCCTGATGCCTCCAATTCTCTAAGATTCAAAGTGTCAATTACTGCATTGAACAGAAATGGCCATCTATCGTTAAAGTTATCATTATTTTTCTCCTGTGGGTTACGAAGTATATTAAAGTCACCACCTACAAGTGTAGGTATGGTTTCTTTAGAGCAAACTCGTATGATGGAGGTATACCAAAATGAACTATCATTTAGATAGAGAAACCAACAGGCACATGAATCATGTACGCAGATTACCTCGTAATGTGGAAGCCTGTGTACTCCTCACTCCTATCGGCCATGAGCAACGGATCCGGCCAAGACCCCCCTCGACACTGTCACATTAGCTGGTTTAATAAAAAGCATGAGATATTCTTCTGTAGTTGTTTGTCTACAAGCAGACGAAGACGATATGGAAAATGTAAAGTTTTGATGGTAAAAAGGCCATAATTTAAGAATGTTCAATGAATCCAAATTCCATCCAACCAAATCTAAAACTGCATCGATAAGCCTTCAACTTCTGGAATTTCAGCATCTAAAACTACTAAAATGTATTGAAAGATTTTTCTAACCCTCAAGAACAGTAGAGATACGCGGACGGCGGTGGAGGCAGCGACAGCGGCGCTCGGACGGAGGATCGGCGGCGGCGCGTGGACGAAGGACCGACAGCGTGGGCAGCATGGGGTCGGCGCGGACGGGGGTTGTGGCATCGTCGCGGATGGAGGTGGTGGTGGCGACGTCTTCCTGGCCGCGGAGGGGGTGGCGTCGAGGACAAAGGGGGCCAAGAAAGGAGAGCGCGACGAACGGGCCGGTCTGCAGCGGGACGACGGCGCCCCTCCCATGCTCTGCTTGCGAGTTGCGACTCGCGATATGGGGATCGGAGCGGAGGCGGTGATGGGGGCGACGGCGCCAGTCTACAGCGGCCTGGAAGGGGTGGCGGCCTTGTGGGATTTGAGCGGAGATCGCGGGTGCGACGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016741