Os08g0113200

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0113200| Description = Protein prenyltransferase domain containing protein| Version = NM_001067373.1 GI:115474482 GeneID:4344498| Length = ...")
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Gene Name

Os08g0113200

Description

Protein prenyltransferase domain containing protein

Version

NM_001067373.1 GI:115474482 GeneID:4344498

Length

9306 bp

Definition

Oryza sativa Japonica Group Os08g0113200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:703559..712864

Sequence Coding Region

705790..706007,706459..706615,706933..707025,707110..707496,708102..708176
,708833..708956,709040..709179,709251..709340,709601..709645
,710264..710389,710485..710619,711313..711798,711886..711943
,712075..712202,712556..712810

Expression

GEO Profiles:Os08g0113200

Genome Context

<gbrowseImage1> name=NC_008401:703559..712864 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:703559..712864 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgcccatggaggaggacttgccgggggcggaggcggaggcggcggggcccgcgccgccgcccgccgcagccaccgggggcgacggcgacggcgagaatcccgccccggctcccgcttccccgttctcggactccgattcggactccgacgatggaggggagggcggggacgccgccgacgagctccgcatccaggccctggagcaagctctccaggagcagcctctcgactacgagtcacacgtccagtatatacagtgtttgaggaagtcgggtaagatcgagaagcttcgtgcagcaagggaagagatgaacaagtatttcccactcacacctaagatgtggcaggaatggacgaaagatgaggcttcattgaggcctgaatcttttgaggatattgaaaagctctatgaacgtggagtgcaggaatacttgtctgttcggctatggcgcgattaccttgattttgttgaagagaatgataaatcagtgtcccaatgttcaccatctggcctcacaaaaatgaggaatttgttcgaacgtgctattactgcagggggattgcatgtgacagatggtagcaagctatgggaagcatacagggaatatgaaatggccattctaaccatcattgatgacgatgacgaggaaaaggcaaagcaagtacagcgcatacgtgttctctttcaccgccagttatctgttcctctggttgacatggaatcaatacttgctgagtataagagctgggaagccgagcaaggtaatgcaaatgacccaacctccaattttgatggtgttccctcaaatgttgtagcagcctacaaaaaggccactgagatgtacaatgtgcggaaacaatatgaggatcaactgagtaatgcggatgcatctgatgatgacaaattggaggagtttctgaaatacatcaaatttgaggagtcttcaggtgaccctgctcgtgttcaagttttgtatgaacgagctgttgcagagcttcctgtttcaactgatctatggatgggatacacgagttacctggacaaaaccctgaaggtacctgctgttctcaaaagtgtttatcagagggccacaagaaactgtacttggatcagtgaactatgggttcgttatttgttgtcattggaacgcattcgtgcatcagaagaagaattgcggcatgtctttgagcaagctctccagtgttcttttccaagcataaaagagtatctcgaaatttatcttactcgagttgatagtttaagacggaggatggcagacggcttggatttccaactgatcaggcaaacattcatggatgctactgagtttctttcaccccaaatgggaacagaggatttattgcttttacatgcatactgggccaaattagagcgtactcttggaaatgatctagctgcagctcgtggtgtttgggaaaatactctcaagaaaagtggttctgttttggaagtctggcagcactacattgcaatggagatagaaaccgagcatattcatgaggctaggtcactttataagcgctgttataccaaaaggttttctgggtctggatcagaggagatatgccatgcgtggataagatttgaaagggagtgtggcacgttagaagattatgaccttgctgtaaaaaaggttaaccctcgtttgaaggagcttatgatgttcaaggcacagcaggaggttaaggttgacactcatgttgtccccaaagaaactacaggaagtgatttctctcagaaaagaaaatcaagcaaaatccccaccaaacagcagcctcctgctaagaaaaagaaagacaacccaccaaaaagtgctgtgctatctgatgatcatggatcaaaggaacaaattagcaccggtcatgtaaaaactggagaggtctcaggggagaagactcaggcatctatggaagtgaatctggtggacggcagccggagagaaaatacagcttcaaaagaatcaaagtcgaacttctacagtgacaaatgcactgcttacatgtcaaacatagacttgacagcaaacgaagagcacatccggcgtttcttttctgatattggtggtgtgacagcaataaggttgctgagggacaagttcaccaaaaaatcaagggggattgcatatgtggatttttcagacaatgaacatcttgaggcagcaattagaaaaaacaaacataaactgcttgcaaagaaagtaagtgttgctcgttcagatccaagcaagggcaagaaaaaccgtgaagcaggatctttctccaaagaccaagctactagtggcgatcgtggtgaaacggcagaatttgccaataggccagacaaggaaattcccaaagataaacccacaatcacagggaagaacacctttgctgcaccacgatctgtggttaaacctcttggatggacacaaaaggatgaaaaatcagatgtgggcgcagaagagttaaaatcaaatgaggagttcagaaaccttttacttaagaagtga</cdnaseq>

Protein Sequence

<aaseq>MATPMEEDLPGAEAEAAGPAPPPAAATGGDGDGENPAPAPASPF SDSDSDSDDGGEGGDAADELRIQALEQALQEQPLDYESHVQYIQCLRKSGKIEKLRAA REEMNKYFPLTPKMWQEWTKDEASLRPESFEDIEKLYERGVQEYLSVRLWRDYLDFVE ENDKSVSQCSPSGLTKMRNLFERAITAGGLHVTDGSKLWEAYREYEMAILTIIDDDDE EKAKQVQRIRVLFHRQLSVPLVDMESILAEYKSWEAEQGNANDPTSNFDGVPSNVVAA YKKATEMYNVRKQYEDQLSNADASDDDKLEEFLKYIKFEESSGDPARVQVLYERAVAE LPVSTDLWMGYTSYLDKTLKVPAVLKSVYQRATRNCTWISELWVRYLLSLERIRASEE ELRHVFEQALQCSFPSIKEYLEIYLTRVDSLRRRMADGLDFQLIRQTFMDATEFLSPQ MGTEDLLLLHAYWAKLERTLGNDLAAARGVWENTLKKSGSVLEVWQHYIAMEIETEHI HEARSLYKRCYTKRFSGSGSEEICHAWIRFERECGTLEDYDLAVKKVNPRLKELMMFK AQQEVKVDTHVVPKETTGSDFSQKRKSSKIPTKQQPPAKKKKDNPPKSAVLSDDHGSK EQISTGHVKTGEVSGEKTQASMEVNLVDGSRRENTASKESKSNFYSDKCTAYMSNIDL TANEEHIRRFFSDIGGVTAIRLLRDKFTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLA KKVSVARSDPSKGKKNREAGSFSKDQATSGDRGETAEFANRPDKEIPKDKPTITGKNT FAAPRSVVKPLGWTQKDEKSDVGAEELKSNEEFRNLLLKK</aaseq>

Gene Sequence

<dnaseqindica>6858..7075#6250..6406#5840..5932#5369..5755#4689..4763#3909..4032#3686..3825#3525..3614#3220..3264#2476..2601#2246..2380#1067..1552#922..979#663..790#55..309#gtggccccttcgcgtcgagcccaagcccttcacttttccttgaacccacacacaatggcgacgcccatggaggaggacttgccgggggcggaggcggaggcggcggggcccgcgccgccgcccgccgcagccaccgggggcgacggcgacggcgagaatcccgccccggctcccgcttccccgttctcggactccgattcggactccgacgatggaggggagggcggggacgccgccgacgagctccgcatccaggccctggagcaagctctccaggagcagcctctcgactacgagtcacacgtccaggtatccaccatctcatcccccccgaccccctctctcccgtgggagtcgccatttctcgctcgctcactaggggtttgagtgggttttgtgacgccgtgttgtttcgtgctccgcgatgttgtctgcacgctctagattccaatttagggtttcctatttcgtattttagcctttctacgctagttttggccattaggatgacgattattgtgagtctgagctccttcaagtggaatatgtaagctgtagagtagtaatgcttgggatgcatagtttgtaaataatagctactagtaccttttcagtgtatggctagcttagtgttgatgagtgttttgtctctggtttcgcagtatatacagtgtttgaggaagtcgggtaagatcgagaagcttcgtgcagcaagggaagagatgaacaagtatttcccactcacacctaagatgtggcaggaatggacgaaagatgaggcttcattgaggtgtatttgttttctgttttagctctttcctcaagtgtttacgtcatctttactaattattatccacgtcaattttctgaaaaatgaaggttcacaaatgtgtgttttggttcctgtctttgttgttacaggcctgaatcttttgaggatattgaaaagctctatgaacgtggagtgcaggaatacttggtatgctaagtagttctttgtgcaatatttgattgaattgtcaactacatggagtagcaacttattttggtgatcttgacattgcagtctgttcggctatggcgcgattaccttgattttgttgaagagaatgataaatcagtgtcccaatgttcaccatctggcctcacaaaaatgaggaatttgttcgaacgtgctattactgcagggggattgcatgtgacagatggtagcaagctatgggaagcatacagggaatatgaaatggccattctaaccatcattgatgacgatgacgaggaaaaggcaaagcaagtacagcgcatacgtgttctctttcaccgccagttatctgttcctctggttgacatggaatcaatacttgctgagtataagagctgggaagccgagcaaggtaatgcaaatgacccaacctccaattttgatggtgttccctcaaatgttgtagcagcctacaaaaaggccactgagatgtacaatgtgcggaaacaatatgaggatcaactgagtaatgcggatgcatctgatgatgacaaattggaggagtttctggtacagaaaaaaactttgcttattatcttttattgctttaccttacttttatttaaaatctgtcattcatttatttgtttgacatgtatggatggtgttagtcttcctgcctgtaatgtttttggatcagtttatttgagcatttctggtgtaatatcatcagatttggaagatagctatatctttgttgcaagttctctttgttatcttcttgtatatgctattttgatttgcttcattaacattatatgtaaatacgcttccattaccagacattctagaaaagcatggtagtctcattttctctttcttttgagtttagactgtattccactcgtcttcatccatggcctgctctttttcccaagcaagaagggacataccccctgcaatttcttgtcttagaaagctatacacacatttgcattgatcagtgatcactactaaacacattgcagaaagagaaatgcacctttcggttttgtatatgtgctttttcttagaaggcacttatttggacactaagttgtatgggcccttattttatttctaaatgatatggggaagtttcttaggtcctttgccacctgtcggtttacattttttatggtcctcacatcagttttcttttcttttttttgtgagattgtttcaatcataatgatgcagtgattatgactttttatgaaatagaaatacatcaaatttgaggagtcttcaggtgaccctgctcgtgttcaagttttgtatgaacgagctgttgcagagcttcctgtttcaactgatctatggatgggatacacgagttacctggacaaaaccctgaaggtccttcagaaacttctatatgtcaatacatttagatccaatgatgtttcttctaatagcaatgggtgcttattcaattctgatatctttggcaggtacctgctgttctcaaaagtgtttatcagagggccacaagaaactgtacttggatcagtgaactatgggttcgttatttgttgtcattggaacgcattcgtgcatcagaagaagaattgcggcatgtaagttccttggttatgtggccagggctttgtttttagatacttaagaatcatagttgtatgcaaaggagatgaaaattttaactgtccaaagtcttgtttagtgtttacagtccaattgctgagcttattataagtcttatgcccatcgagtttgattttttttgttggcaatgaaaactattaaaaggaagtaggactatatttgtgctttcagtgttgtatttgttctcttagaagttaaatattgcagtatgatccagcattagatatctgctgtagttttgtaccaagagaggagattttactcgagtaattgtgagcatcctatgaggtttattgtttgttgtgttactgtacaaaatatcctaaagcatcctgataattagccaacagagcacattttgactagtgagaacactatgtcaacttgtcaagaaatgtcaatgtgctacctgcaattgttttattgcccatcattactagtacttttttttggcagttcacaaagattatcaattggcactctctctttgttggtttctgtttatataattatgggcacatcagggagacactgatatatatatgaatatatgttcttgtactcattgtcaggtctttgagcaagctctccagtgttcttttccaagcataaaagaggtgacatatatacagcctcatccctttttctccttctggttgtcaacttatttgcttgcgcaatagtactatctgtgccaatcttgatagtaattgtaatacttctgattgttttgataagcccagtggctgcaattttctggataaactagcaccttcattttgagaattctttctgtcccactcccatggccatcacctgttaatgttctagtaagactgcttatttactttttattgggatgattgcacctttgcagtatctcgaaatttatcttactcgagttgatagtttaagacggaggatggcagacggcttggatttccaactgatcaggcaaacattcatggtaagttctcttttagctcattgtatgtatgcttttttttactggaactgactatgggtatataatatcaggatgctactgagtttctttcaccccaaatgggaacagaggatttattgcttttacatgcatactgggccaaattagagcgtactcttggaaatgatctagctgcagctcgtggtgtttgggaaaatactctcaagaaaaggtttagttttttgtcatgtgcaaattcgtacattgttgtcatgcgcagtactcactgtcacttaattctgttttatattccagtggttctgttttggaagtctggcagcactacattgcaatggagatagaaaccgagcatattcatgaggctaggtcactttataagcgctgttataccaaaaggttttctgggtctggatcagaggtatactctttttggttaactaggagaatttgtgggatcttctgagagtagatgttcttcatctagaatgcaggcctataaataataaaattgaacaaaaaataatttaagattaatgactcctagctttttaattcggactattctcaactaggtaaaaaaattacaatctgcaacagcagcagcaaaattgtttaaggaacatggagtttttttttgtatcaattttcaatgattgacatgtatcccatgatatcttctcttgtttttttttatgttctggtatactcacactcttttcccccgttgcataattggatctacctccattttgttcataattggatctactagaatcggccaccaaacacaagcatcatggactaatccttgatttcattatgttccttggttgttgaacctaactataccgattaacagttctacttatttctgtttattcatcataattatgactctaacattgttgaacgaaagcttgacttacatttactgttcttctctcaatcgaacttcattctttcatatagataggctaaattccgttgttccttctatttgcaccatcattaataagtttctttgacaaagcaaaagaattattatgacttggttgttatgtgcttcaactttaggagatatgccatgcgtggataagatttgaaagggagtgtggcacgttagaagattatgaccttgctgtaaaaaaggtatggtactattggcctttttaattatacccttgtttgtttcacctgtccatttgccttttgctctctgtccatttccttcagctgaatttaagcaatcttagcaatagtggtgaaatacctcacttttgacttccgaacaatatcttcttgagtgcagagttattggattgagcataaattcatgggccagttgtttcgacacactatcccaatccccaaatagcaaactaggtgcttgtgttatgtgctgttttgcacttccttgattatccatcaaagaatttgagaatgcaattaacttctgcagattactggtctcttttgtggaattgtacactgcaaattttggtatcaatctgggcttacatgtacaacttaatgctatgtgcaatcagcagatgttggtaggagtatttagtattgtactttgtgagttgctatcatatttgatatgtaaacaactaagcatgtctataatttaataactgacttaatttggtggtacagtagggcactatgtaaacattttagacttaatttggtcgaatagcaggttatcctgtaaactatagttgaacttatcatcttcctattttgaccaggttaaccctcgtttgaaggagcttatgatgttcaaggcacagcaggaggttaaggttgacactcatgttgtccccaaagaaactacaggaagtgatttctctcagaaaagaaaatcaagcaaaatccccaccaaacagcagcctcctgctaagaaaaagaaagacaacccaccaaaaagtgctgtgctatctgatgatcatggatcaaaggaacaaattagcaccggtcatgtaaaaactggagaggtctcaggggagaagactcaggcatctatggaagtgaatctggtggacggcagccggagagaaaatacagcttcaaaagaatcaaagtcgaacttctacagtgacaaatgcactgcttacatgtcaaacatagacttgacagtatgccattttccttgcccttgatgctcatacaagttgtagctcctgaacttcaataaactaacatcttagctctctttataggcaaacgaagagcacatccggcgtttcttttctgatattggtggtgtgacagcaataaggttgctgagggacaagttcaccaaaaaatcaagggtatgtattcacactaggtgattcagtaagacaatttgtcccttggtacattgtattggctaataggtgcatatcagttcaagaaatattagtctatcgagtcttcatttttgtgggtatcgtttactccttagagtccttagcacattcaaaaattaaactgaaacattggatcattactctgttgcttttcaatcatgtttaattcttgcgattttttttaactggagaaaatttagcatcaaaactctactgatttgttctcttgtattgatttgttttgctgacctttttttcttttctttttttttttgcaggggattgcatatgtggatttttcagacaatgaacatcttgaggcagcaattagaaaaaacaaacataaactgcttgcaaagaaagtaagtgttgctcgttcagatccaagcaagggcaagaaaaaccgtgaagcaggatctttctccaaagaccaaggtattttctttggctgttacctgacagcaaatttcagtcagttatgttattttgctaatgtatgggaattgtagtgttttgaagctactgaatttcatcagcctgaaggctataactaatttataaaccaacaagtaatatagtactgtagcaaaccgactggtattggcactttacttggaattatcagtaactcttgtgattatatatcctgagttacccgtcatataagctgatcagctcctttttcaaaacatattctggacttgtcccattgttctgtctattccacggttgttatcttttgagatttggataagactaaaattgagatcatgcagtaatcctttgaactcatttttggtgtctcaggtatgatatgcatcatatgtatacttcagaactctgaccaatgatcaatctgaatattgtactatattcctttatccagctactagtggcgatcgtggtgaaacggcagaatttgccaataggccagacaaggaaattcccaaagataaacccacaatcacagggaagaacacctttgctgcaccacgatctgtggttaaacctcttggatggacacaaaaggatgaaaaatcagatgtgggcgcagaagagttaaaatcaaatgaggagttcagaaaccttttacttaagaagtgatgctgataggcaggttacttcttcccttttcttttggtatcttcacagatgatgctcaatcatctgctaagttcattatcttgcatttgtaaaaaccaatttgccatttgccatgaataaatgaattgtcaatcccattacctactgacacccactattgatttgtttccttttggtacattggctgccaaatctatagctatttgttaactggcattatatggcttaggataataaaggttgtccttttgcatttggcttatcataccttatccatggtggaattattattacttcaacttgtcatgtgtcagtatatatatgtaagtatgtaacatataaatataaacacagaagagtatgctattgtttgcactggttacgtgatagtgatgttggggtgggctatccctgtcgattggctgaaaaaatatgctgttttcaacaacaaaattatgttaaaatgggacttcaggaacctcttaagtggctagttcaacatatttgatcttgctgaccactcgtttcacctcttaagttgcttatgatgcatgctcataagaaatggagtagtttatttcaattgtgagttatgacccattttatgggtggaattacatggcaaaacagaggttcataaatgcataatatttactttgagggcatggaaaactattctattactccctccgtttcacaatataagtcattctagcatttcccacattcatatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggaggaagtagaagatagaacatgtaattctttttctgaaattgtaagaaacaggacactgtagaaccatatggacccttttgttttaaatacctggtttaacttttctttgctgtggataactctaaagaacttatgttttgggtgtttgtcggggctatgcatgtttgtacggttggtaactgcagcaaatcgtgtctttgtggtcttcggtctaaaaaaaattgcaaatctaaaagaacagagcgcttgcagaaccatatgttgcctgtttgaaacacctattggctattgtaccttttctcagcagtaacttgaaatttgaagaaaaacaaacttgcagaaccatgtttcaaatatctactgtgcaccttatgcatatttctcaaaaattttcacaatttgaccctttgcaaaaactatttttacaaatgaaccgtcaccaaaacttatttcaaaaataacccttggcgccgaacttagacacctcagcgccaaatagcgtggcgctgaatatgcgttggcacgctgacttagtctcccatccgcggtggcacggcattcagcgccagttgatatgtagctaaggtgtctaagttcagcgccaggtgatttggcgctgaccaaaagagttatttttgaaataagttttggcagcggttcatttgtaaaaaaagtttttgcaaagggtcaaattgtgaaaatttcagcatatttctaagccaactttctcaaatgaagacagtgttttttttttttaaatattgttctggatctgggttaattcatggctccttgtaatgtgtgcaggtgtgtggatctccatgttgccatcaaactctgatttctgtaatgtacttttctggtggcttcatgcatcatcttcggtgaacagaaaatcagtgaccttttgggctcctcaaattgaaatctatccatccagctgcaaaagtataatcagcacaggagaatccagacatcattagcaaacttcttagaaaccttcttttttttctagtttgaaggagggaagaattttctgaaagtcgtgtaggacttgtagtttgcagggaaacggtgtatataactcatgtggctgccttaaaactgagctcccgtgctcctttcgctttcgtaagtagttatgctcgtttctcaggttttgtactgccaagaaatttatgatctcccgtgttaaaaaggataacggatggttagagagtgcagcttacgtatgtcggatgccaatgtactgactgtaagctgagcaattattcatcacaacagtacaccggtttccagtatttattgttcgaatgagctcgcattttttagccgcctcagaaaatattttgggacgaatattttgtgatgaataatacaccagtattatattctagtgcggagggaaatttaaatgttgtgtttaggatg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0113200, RefSeq:Os08g0113200