Os08g0113300

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0113300| Description = Similar to Clone ZZD1296 mRNA sequence| Version = NM_001067374.1 GI:115474484 GeneID:4344499| Length = 4526 bp| Def...")
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Gene Name

Os08g0113300

Description

Similar to Clone ZZD1296 mRNA sequence

Version

NM_001067374.1 GI:115474484 GeneID:4344499

Length

4526 bp

Definition

Oryza sativa Japonica Group Os08g0113300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:714643..719168

Sequence Coding Region

718591..718707,718790..718915

Expression

GEO Profiles:Os08g0113300

Genome Context

<gbrowseImage1> name=NC_008401:714643..719168 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:714643..719168 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataaccccaagtggaatcacgtatgagagggcggtgattcttgatcatcttcatagggtggggaagtttgatcctgtgacccgtgagacacttgaaccacaccaactggttcctaaccttgccatcaaggaagctgtccatgcatttttgagtgaacatggttgggcttacaggatgagatga</cdnaseq>

Protein Sequence

<aaseq>MQVPDHLCCKITLDIFRDPVITPSGITYERAVILDHLHRVGKFD PVTRETLEPHQLVPNLAIKEAVHAFLSEHGWAYRMR</aaseq>

Gene Sequence

<dnaseqindica>3949..4065#4148..4273#acgatcttctagaagcgattcgcgcgcgccgccgcctcctcccctccccttccccggagcgaagccgccccgccgggggggatgtcgccggcggcggacagcgcggcgtcgaagcggcaggcggagctgctcaagcaggagggcaacgccttcttcaagaaggaccgcatcagcgccgccatcgacgcctacaccggggtaaggttcccgccgtggcatcgcccgcgtgattcgtgccgtcctaattcttcgaaccaaccaacatttggacccttcaggccgccccgctatatcagcatgttatacagtaaattccgtgaaagcttgtgaatctccctattgtaatatcatgtcaattgcatactggattaccctggctgcttctcgggctccggattaaccctgcttcggcgacgagtagctggtctagataattttcgttagtttgttgatgtgcctggttctctgaaacatgcaagtctatgtcattgcctgctgacgtgtgcttgcttgcttgtgggcagttgagtgatgcttttgcacatagattcctgcctttccttttagttagttgagaattgccgctttgtgcggtgccatcacatcgatgagacgatgagcaaggaaatttctcaacgatgaacatccttatttttaatttagctaataccgatgcactgtaaagggtttgctgggagaggggagggattgtttgagagtggatagacatattggtgtttatgtaccatgctgtactagtctagttcagagcgtgaaaattactgcctctttgtattgtttaaggtaaaggctacaatttagttctagattatccctcttgtttggcctctttacatcatggtggtggcggcgataaaaacatgtatcagctgacttagtcgacgacagattatatggaagcactcaagacttcttcttcttttcttttttttttttttgtagaaagcctgtacaatttgcaccttccatgctaattgcagtctctattttggttgacaggccatagctctctgcccaaaggttgcagtatattggaccaaccgagcactttgctacaagaggcggaagtctgtataactattatttcctcttctttttttttgctgcacattgggagcaattgattcacatttatgttgcttacaccatactttgccaatctgagttttgcagtgagtgggttagggctgaggaagattgtagaacagctattcagcttgacagccactctgttaaggttggtgtatttacctatctttaacaattattgtctggacttgttttcttgcaactatctcctggtgatgtgtgctctactaaattaacaagtgacaacttttgctttaaggacataaattttcttttagagatactgaattccattttctatctctgttacttcttgaccaaatatgttacaatttttttgtttatttcctgtttgagaaacactaatgacatctacctgctagttgatttagtctcaacttgttattgcattgccttttggagggaccctttaattttctgttctttaaacacacctacctaacatcctctaatctagatttaaaacaaaattatgttaccccctctgttttgcattttttgtccatggcccactgcaagcacacactaaggaatccttgttaagatgctgccgcagatggattacttcctcgctcattgagaaagatttcagagcctcctagattgattgatgctggagtgtatggacaatagttttggtcttgttgaggtttctggggttttgggtatctatggttggtgttttggtcctgcacagacacatgcttggccatgctcttgttttgggttatgttgttttttctgaagtacgccttgtgatgtgtcttgtatgcacttcatggtctgtaagcattacttcttgttcttggatttgatgcctggggagctgtgcggctgtgccctttgaatctaaaaagcagaagttaatgatagaacaccttgcatacccctaccaaattcataatacaaccaatttacctctttcaaagtatttcattaggggcagagagtgaaaaatttgcaataactatgtcttgatctcctcaacgagcacacactttgaaacacatattactggaaatgggatagttttcattagacattactgactagatttgcacttaaacatagatatggcaaactggacattaatcatattaacatgcagatgttgcctgctgtttaccccttagtttgaatataaagtgcatactcttttgctcaattagttttgaattttccgcaaatatgatttatccatgtcttatgaagggctcacatagttttatgttatgttttatttgtatgttactccacttgggaatagggtcctccaattatagcaaaatgacctttagagccattgatcttgttacttgttagcacttgaacatgaggtggatttatgctcatgtaactcataactcaataattagcttatcttgtttggctcatgtggcttgaatcgagtatttcacattttacagacctgatttagcaaccaacagggtagaaatccctccttttgatactggttatatttaaagctcttggacagttggacgaatgggggcatcacctcaaactatagaaaaatgtcctaagatacatcagcagttcaattcaaaatatgaattttacatattataaggggaccctactgcgatgatttactgatatcatgttcattaagatatgcttctagtgcctaagaattgaaagtacgttactatttcaggatgctttggtgtccttattaaaggtagaaactagaaagtaagacattttatattgagtaaaatttaaaatgcatttttgtggagtcaggagaaagaacttgtctgttctttgtttcctttgatccatcttaacccacttttggtatagccagtttgaaatgggcttgaacttaaagcgaaactttagatgcctctgcaggcaacagatgtattttctctagttgagcttaataccatcttatcttgttctttacaatgctaatacctctagttacctgactttcttcaactcattgattttttgcaggcacattacatgctcgggcttgcacttctcaacaaggacgaattggccgagggaataaaagaactagagaaggtctgatttcacactcagtcacaagtccacacacatgcacacacttgagtaataatgttatgatggtctgattttgccttaagccttttttttgctcctccttcctcctacaaatgctaacacagccacgatgttgatttggagcacaaaattgaattatgattttaaactgtcttaagaatagttgaactggcaatgccaacagaaacaggaaaatacaatttcatacgggatctacttgttttttgtgcttgttcttcttgatgatgctattttagttacaactcaaattctgcttacgccattttactgatgatccaatctttactaacccagtcgttggagcttggaaggggtgcacatccagcaagttacatggttgaagagatctggcaagagctttctaaagcaaaatacatagaatgggaaaatttatcaagcgaacgagtccgtcaattgcataagctgaagtttgtgaaaaccttttccatacattactcaatcaatatgacagagatataatgccctaattaaatagtgttttcccttttccagggaagcatgtaaagaagctcttaggaattataacagccttgacaatcctcctgcatatgtccccgaggaacagctaaatgagcttgaggaagtttttcggaatgccaggaagtctgatattccaacagaagtacaacctgcctttgacactgcttacttccgtgccctgactggcttaatctgaaaagaaaagaactattttatatgcaggttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataaccccaagtggaatcacgtatgagagggcggtgattcttgatcatcttcatagggtaattgacagaggcaataaaatgtctttgaatgtatttttgctttgcttacaaaacttacgatgagctttcaaattcgtaggtggggaagtttgatcctgtgacccgtgagacacttgaaccacaccaactggttcctaaccttgccatcaaggaagctgtccatgcatttttgagtgaacatggttgggcttacaggatgagatgactactttgaattacacctgggcttggagctttggaggcaacatttcagattgcaatatacatgtttcggttagtcaacttaaatgtgtcattttgtttatctttacatatttattggtggaaaaggttttacctgggatggctgtgtacagattccccttctctagctatccctcctctctactctgttcatgtgtaatgcttggtatcagattatcacttatccacagtaaaagaaaattaaagtggctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0113300, RefSeq:Os08g0113300