BGIOSGA016779

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Revision as of 04:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016779| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016779, complete gene.| tag = OsI_166...")
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Gene Name

BGIOSGA016779

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016779, complete gene.

LocusTag

OsI_16686

Ensembl Transcript ID

BGIOSGA016779-TA

Ensembl Protein ID

BGIOSGA016779-PA

Length

3504

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24842098..24845601

Sequence Coding Region

24842098..24842369,24843317..24843411,24844474..24844583,24844699..24844771,24844927..24845087
,24845332..24845601

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24842098..24845601 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24842098..24845601 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCTACGGCAGAAGTTGCCGCCGCGGCGGCGTCGGCGTCGGCGGCGGCGGCCGCAGCGGAGACGAAGGGGAAGGGTGAGGAGGGGAAGAGGAAGGGTATGGGGGATACTGGGGATGATTTGGCGGGCTCTGTGTTCGCGGGGCGCGGCGATGACTACGAGAGATGGCTGCAGTACCTGTCCAAGGAGGAGGCCGCCGTGCACGCGCGCCTGCGCCGTTCGCCCGCCGTGGCGTCCGCAACCTCGTCGTCCTCTCCATCCTCAGCGAGGCAGTCCTTCTGCCTTGTTTCACAAGAAGTGCATTGCAGTTTCATAACTCATTCATCAGTCAAAATATTTAAACATGGATTGGGCGATACAAAATTGGAGCAGAAGGATCAGAAGTTGCTTGAAAGATTGAGAGAGGAGAGAAAAGCTAAGATTGATGAACTGAAAGAGAGAACAAATTATTATCTCACCCAGAAGCTTATTCAGAAATATGACCTTGATCCTGCAGCGAAAGCAGCAGCAGCTTCGGTCTTGGCAACTAAGCTGGGGGCAGATAGTGGACGGAGGGAGTACGTCAAAGATGAAGCAAAATCTGAGTCATCACAGGCTAGAAGTAGCGCCAGTGAGGTAATTCCTTCCAATGGGTTGAGAAACAGGAAGCATACAAAAGCAAAAGGCAGCAGCACTGGCAACGCTGCAGATGATCATAATACTGGGCAGCATGCAAAACTTGCAGGGTTGGCCAGGAAAGAAGATTTTCCTCACGTGACGTACTGCTGCCCACATTGTCATGCACTTAACATGTCAAATCAAACCATTGGGCGATGGTCCGGCTCAAACTCCGGTCAGTTGACCTCAAGTGCTCAAGTTTCTGGTACAAATCCTGTTGCAGACAATGAACTAGGCAACCAAACCGAAGGTCAAGAGATCTACGTGGAGGAAAATTCTGGGGAAGGTCAAGGGATCTACGTGGAGGCAAATTCTGGGTAA</cdnaseq>

Protein Sequence

<aaseq>MASTAEVAAAAASASAAAAAAETKGKGEEGKRKGMGDTGDDLAGSVFAGRGDDYERWLQYLSKEEAAVHARLRRSPAVASATSSSSPSSARQSFCLVSQEVHCSFITHSSVKIFKHGLGDTKLEQKDQKLLERLREERKAKIDELKERTNYYLTQKLIQKYDLDPAAKAAAASVLATKLGADSGRREYVKDEAKSESSQARSSASEVIPSNGLRNRKHTKAKGSSTGNAADDHNTGQHAKLAGLARKEDFPHVTYCCPHCHALNMSNQTIGRWSGSNSGQLTSSAQVSGTNPVADNELGNQTEGQEIYVEENSGEGQGIYVEANSG</aaseq>

Gene Sequence

<dnaseqindica>1..272#1220..1314#2377..2486#2602..2674#2830..2990#3235..3504#ATGGCCTCTACGGCAGAAGTTGCCGCCGCGGCGGCGTCGGCGTCGGCGGCGGCGGCCGCAGCGGAGACGAAGGGGAAGGGTGAGGAGGGGAAGAGGAAGGGTATGGGGGATACTGGGGATGATTTGGCGGGCTCTGTGTTCGCGGGGCGCGGCGATGACTACGAGAGATGGCTGCAGTACCTGTCCAAGGAGGAGGCCGCCGTGCACGCGCGCCTGCGCCGTTCGCCCGCCGTGGCGTCCGCAACCTCGTCGTCCTCTCCATCCTCAGCGAGGTATTGTGTCCCCTGTGTGCTATCACTTCGCTTCAGGTTTACGGATGGTTATTCTGAGTGCTGGATTTTGCTTGTAGTTGAATTTGCATCCGTTGGTGACCCGTGTTTTTCCCCTTGAATTGAGTTGCGTAATCTTAAAATCCACTATGAACCTTGCTATATTACGGGTAAGGATCGTTATGGATTAGTAGGTGATAACCCACGCTTTGCTGCAGAATGCGTGAACGAAATATATGTTAAATATCATAGAAATAATGAATATTGAAATATTGTAAAAATAATGTGAGAAAGATGATTTGTCATATTTATATGTTGAGCTCTATTTTATATTGTAGATAATGTGTTATACTTGATGAGATTTAAGATACTCTATAACAGTAATTGCTAGTGGATGATGAAGTGACACACTTGTATGTTGAGTTTTAGCTTTTAATAATTGCCCGTGGATACTTTATAGAATGTATAAATATGAGTGCCAGTAGATAGATAAGAGCAAGTGCTTCGTTTCTGGATTGAGCTAGGATGGTTAGAGCCTGTTGATGATAAATCATGGCTGTTGGAAACAGTAAAAGTACATTTGCAGCATCATGAATGGTATTTCTAGATAATGCAAGATAACTGCACCATGAACTGTATAAGTTCAGGCTCCCATCGGATGGCCCATTAAGCCAAAGAAAAAGCTAAATTTTAAATTTTCAAACTTAATTTTGAGATTGATTTTGAGATATTTTCAACGTAGTTTCTTTTTCAGCATTGGCTTTTAAGTCATCAAGAACACATATATAAAAGTTTTACCTACAAATTTATTTTTATTTCCTAATAAGCTGTTTTGGCTTATTAGAAAATAAGCGAAACGATGGGGCCCTCAATTGCTTATAGTTTAGTGCGTGCAGGGCTGCAGGCTCATGAATAAGTTCTGTTTGCTACGGTTCCCTCTTTGCTGACAGGCAGTCCTTCTGCCTTGTTTCACAAGAAGTGCATTGCAGTTTCATAACTCATTCATCAGTCAAAATATTTAAACATGGATTGGGCGATACAAAATGTATGCAATCTGTTTGTAGATACTTTGGCTTGCTAGTATCATCCTGAGTATTTCAGAATTGCTCCTGTAATTTTGAGGTACTGGGTGCAACATTTGACCAAAAATAGCAATAATTATAGCCTTATTTGAAAATTAATAATTATAACCTTATTTGATTTTTTCTTTTAACTGAGCAATTTTTGAAATCTGATTGATGCTTTTCTCAGGTGGGAGCTGTAGTTTATGCAATCATCATGACAAAATCTGTGGATCTAGATTGGCAGATGAGGGCTATTAGAGTGCTGCCTATGTTCGTCTTGCCTGCTTTATCCTCAATGATATATTCAATACGCTAAGCTTCACAAGGATGTGTAATGCTCAAACTCAGAACTCTCTCATGATTTATAATTTTAACTATTGATAAAATGCTAACCATGCAGTTCTTTTGTTACTGATGATTATACTTAGACTGTATTTAGTCAGTTCTACTGAGGACTTTCATATCCTTTGACCTTGTATACAGTTGCTCCTCCTGAGATAATTTGTTTTAGGTTTTTTTTCCTTTAATTATCAACCTTACCCATTTGATGTTTTTTTTCCTAAGAACGTGCAAAAACTTTGCACATCAATATATTAGAAGATGAATAAGATTTACACACCGCGTCCTACTAAAAGTAGGCGCAAGACATAAAGGTGAAAAAACAATCTACTTAAGTACTATTTGACGTTTGAGTAACCTGAGGACTGGTATGTATTTGTGTTAGTTGCACTTAGTGTACACTTATGAATCATTTTGACTATTGACCTATATTTCTAGAAGGTTTTCATTATGATTAGCATATTGATTTTACTCAAGGTGGATAGCTGTGACCAAAGCTTGTTAGATTTTATATGATCATAGAAGAAATCTTATTAGCAATTGTTAGCATCTTCATGTCTCTCTCTGAAGTCTGAACATTATGATGTAGAGGTTAGATTTTATGTAAATCTAACGTGGACATGCAATTGGACATTTCTTAGTTTGGGACCCATCAACAATAGGCTTTGTTAGTGTACTAATAACCTTTTTGCCTCTGTACACAGTGGAGCAGAAGGATCAGAAGTTGCTTGAAAGATTGAGAGAGGAGAGAAAAGCTAAGATTGATGAACTGAAAGAGAGAACAAATTATTATCTCACCCAGAAGCTTATTCAGGTAAGAATTACTACTTCTTTAAAAAATCTTTATTAATATCAGAAGTATTTGATATATCAGTTCTATTTGGTTTTGTGTACAACATTGAATCGTGTACCATCTTGAACATGTGCAGAAATATGACCTTGATCCTGCAGCGAAAGCAGCAGCAGCTTCGGTCTTGGCAACTAAGCTGGGGGCAGATAGTGGTCTTAAAGTATACTCCCTCCGTCCCAAAAAAACCCAACCTAGGATGGGATGGGACATATTCTAGTACAGATACGGAGTACATTGTACTAGAATATGTCCCCAGATACATTGTACTAGAATATGTCCCATCCCATCCTAGGTTGGGTTTTTTTAGGACGGAGGGAGTACGTCAAAGATGAAGCAAAATCTGAGTCATCACAGGCTAGAAGTAGCGCCAGTGAGGTAATTCCTTCCAATGGGTTGAGAAACAGGAAGCATACAAAAGCAAAAGGCAGCAGCACTGGCAACGCTGCAGATGATCATAATACTGGGCAGGTAAGTGAAGCTGTAGGCGATCACCTGGAAGCTATGGAACCTTCTAGAGTCGTTGGGCATTATCAAAGCTCAGGTACCAGTGACAGTGGTTGGATGGCAAAGATTTGTGGCAGTTGCCATATGCATAATGGCGAGTATACTAATTTATTTTGCTTTGAAAAGAATATAACAATTACAGAAAGCCCTCGAGAGATTACAGGTGCTATGAACTTCACATGACATTGGTACAACTAACGTTACATAGCATGCAAAACTTGCAGGGTTGGCCAGGAAAGAAGATTTTCCTCACGTGACGTACTGCTGCCCACATTGTCATGCACTTAACATGTCAAATCAAACCATTGGGCGATGGTCCGGCTCAAACTCCGGTCAGTTGACCTCAAGTGCTCAAGTTTCTGGTACAAATCCTGTTGCAGACAATGAACTAGGCAACCAAACCGAAGGTCAAGAGATCTACGTGGAGGAAAATTCTGGGGAAGGTCAAGGGATCTACGTGGAGGCAAATTCTGGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016779