Os08g0113500

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0113500| Description = Similar to NAC transcription factor| Version = NM_001067376.1 GI:115474488 GeneID:4344501| Length = 2277 bp| Defini...")
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Gene Name

Os08g0113500

Description

Similar to NAC transcription factor

Version

NM_001067376.1 GI:115474488 GeneID:4344501

Length

2277 bp

Definition

Oryza sativa Japonica Group Os08g0113500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:731319..733595

Sequence Coding Region

731319..731547,731754..732022,732274..732396,733089..733595

Expression

GEO Profiles:Os08g0113500

Genome Context

<gbrowseImage1> name=NC_008401:731319..733595 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:731319..733595 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggggatcagatcatcatcaggatgtcgtcgcggcaccgcggggcggtggcggtggaggagacgacgggcaggcgcacgacatggtgatgccggggttccggttccacccgacggaggaggagctcatcgagttctacctccggcgaaaggtggaggggaagcggttcaacatcgagctcatcgccttcgtcgacctctaccgctatgacccgtgggatcttcccgctctggcctcaattggggacaaggagtggttcttctatgtgccaagggaccgcaagtaccgaaacggcgatcggcccaaccgagtgacgccatcggggtactggaaggccacaggggcggataggatggtgaaggtggagggtgaccgtcctatcggcctcaagaagacgctcgtcttctacgtcggcaaggcgcccaaggggcttcgcagcagctggatcatgaacgagtatcgtctccctcatggcgacgctgaccgctaccaaaagatagcttttgatatagtcaccggcaggcaggcaagcatatgtactgcatatgctattggcacgtcttgtctctcagctggtgatgaaattaaagtacacaccatgcgaaaattgtatgtagaggaaatttcgctgtgtcgagtctacaaacgcccaggaatcgaagacaacttccacctcaccggcacaaccactaaatcctccggctcaaaggcggcggcggcgatgggcaagaagcacgccgccgcgaaccggacgtcatcgacggcggcggctgcggcgccccgcctcgccccgatgttcgacggcggcggcggtggccaggcacgggccacggcatcggcggccaagaagcaggcggcgacggcggcggctgccaagcgccgccatccgcgtcggcatcgacggccatggagcttgcagcggcggcggcattccacctcgtctcgtgtttgctctcgcgtttgccatcggtggtacggggccccgctcacccacgggtcccctgcgggggcggggacgggggatatttcccacccgaccacctgtgcggggtcagggtcggggggagaagtcggggagcagggcgggggcgttccagtccaacccaccccgttgccaaccctatag</cdnaseq>

Protein Sequence

<aaseq>MRGSDHHQDVVAAPRGGGGGGDDGQAHDMVMPGFRFHPTEEELI EFYLRRKVEGKRFNIELIAFVDLYRYDPWDLPALASIGDKEWFFYVPRDRKYRNGDRP NRVTPSGYWKATGADRMVKVEGDRPIGLKKTLVFYVGKAPKGLRSSWIMNEYRLPHGD ADRYQKIAFDIVTGRQASICTAYAIGTSCLSAGDEIKVHTMRKLYVEEISLCRVYKRP GIEDNFHLTGTTTKSSGSKAAAAMGKKHAAANRTSSTAAAAAPRLAPMFDGGGGGQAR ATASAAKKQAATAAAAKRRHPRRHRRPWSLQRRRHSTSSRVCSRVCHRWYGAPLTHGS PAGAGTGDISHPTTCAGSGSGGEVGEQGGGVPVQPTPLPTL</aaseq>

Gene Sequence

<dnaseqindica>1..229#436..704#956..1078#1771..2277#atgcggggatcagatcatcatcaggatgtcgtcgcggcaccgcggggcggtggcggtggaggagacgacgggcaggcgcacgacatggtgatgccggggttccggttccacccgacggaggaggagctcatcgagttctacctccggcgaaaggtggaggggaagcggttcaacatcgagctcatcgccttcgtcgacctctaccgctatgacccgtgggatcttcccggtaagatattaatcccatcatcgtgacatgacatgaggtcgagcttagctagcatatgtgctgtacatgagctaagctagctagtggatagctagcatctgcatgatttcatgtgaccccctctttgatttcatgtgaacctttttgggtggctcacttttttcccaccttcttgttgctccccttacatggatggatgcacccagctctggcctcaattggggacaaggagtggttcttctatgtgccaagggaccgcaagtaccgaaacggcgatcggcccaaccgagtgacgccatcggggtactggaaggccacaggggcggataggatggtgaaggtggagggtgaccgtcctatcggcctcaagaagacgctcgtcttctacgtcggcaaggcgcccaaggggcttcgcagcagctggatcatgaacgagtatcgtctccctcatggcgacgctgaccgctaccaaaaggtactgaattttttggttgctgttcagtttgatttcatgcttgatttgctacttctttgtgtgcatgatccatcgaattttatgaagtttggggatcccttgatttgatggatgcatcgagcccccaagatcttgtaaaagcttaaagtgttggatcctccgtcgatctgaaagatcgatatgcatccactcaaaaattctttttcttttcgcttttggagatacatgattgaacgcatgttgattgctagatagcttttgatatagtcaccggcaggcaggcaagcatatgtactgcatatgctattggcacgtcttgtctctcagctggtgatgaaattaaagtacacaccatgcgaaaattgtatgtagaggtaatgcatgcaagaatctatagctatagatcttgatggatcaattaattcttgcatatatataaactttttgtacaaaaggagcacactcaaatttcaattgtccattttgttcttctctatttgaactttcagatctgaaaaaaaatgaactttctctattaattgatgaatttaatctgaatatttccgggcgatgacttttcccccctgcaactggtaggcgtcatcttcctcctttttggaagcgatgcctcatcttcttccttaatttcgttctgtgtaaagtttccagcttttcatgatgtgcacgatctggtatataacactataacctactaaccaacacaaaaagtatactctggttattctaaatcaaaataaactcctagaacagcgagacaggacgagatctcgttctgtgattactatatataatcgaactatatttttttactactaattaattctttccaaaaaattctgatggtttgcccaaaaaaattctgatagtttctttgtttctttacatgtatatatatagagagagagcatatgaaactttcacatgtgttttactataattttcttatgttttctttcaaacacttatgctatttccatcaatctctcctagctagtacgtaatcgatgacctaatataattgactatatatcgttgaattattcaggaaatttcgctgtgtcgagtctacaaacgcccaggaatcgaagacaacttccacctcaccggcacaaccactaaatcctccggctcaaaggcggcggcggcgatgggcaagaagcacgccgccgcgaaccggacgtcatcgacggcggcggctgcggcgccccgcctcgccccgatgttcgacggcggcggcggtggccaggcacgggccacggcatcggcggccaagaagcaggcggcgacggcggcggctgccaagcgccgccatccgcgtcggcatcgacggccatggagcttgcagcggcggcggcattccacctcgtctcgtgtttgctctcgcgtttgccatcggtggtacggggccccgctcacccacgggtcccctgcgggggcggggacgggggatatttcccacccgaccacctgtgcggggtcagggtcggggggagaagtcggggagcagggcgggggcgttccagtccaacccaccccgttgccaaccctatag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0113500, RefSeq:Os08g0113500