BGIOSGA016787

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Revision as of 04:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016787| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016787, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016787

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016787, complete gene.

LocusTag

OSIGBA0153E02-OSIGBA0093I20.16

Ensembl Transcript ID

BGIOSGA016787-TA

Ensembl Protein ID

BGIOSGA016787-PA

Length

2961

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24974846..24977806

Sequence Coding Region

24974846..24975290,24975762..24975925,24976015..24976112,24976203..24976337,24976425..24976614
,24976700..24977806

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24974846..24977806 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24974846..24977806 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGCCGCCGCCAACAACAGTAGCTCGGCCGCCTACGATGCGGCGGAGACAGGCGGCCTCCTCCGCCGCCGCAACACCACCGCCGCCGCCCGCGGCAATGCGGGGGAGGAGGAGGAGGAGGCGGAGGCGGTGGCGCCGTCCGTGGAGCAGGCGTTCGCGGACAAGCCCGTGCCGTCGTGGAGGGAGCAGCTGACGGTGCGCGCCTTCGTGGTCGGGTTCCTCCTCTCCATCATGTTCAACATCATCGTCATGAAGCTGTCCCTCACCACCGGCGTCATCCCCTCGCTCAACGTCTCCGCCAGCCTCCTCGGCTTCTTCCTCGTCCGCCTCTGGACGGCGGCCATCGAGAGGGTGGGCTTCCTCAAGCAGCCCTTCACCCGCCAGGAGAACACCGTCATCCAGACCTGCGTCGTCTCCGCCTACGGCGTCGCCTTCAGCGGTGGGTTTGGCAGTTACTTGTTTGGTATGAGCGAGACCATAGCTAAGCAAGCAACAGAGGCTAATGATCCGATGAATATCAAGAATCCTCACCTTGGATGGATCATCGGGTTCATGTTCCTCGTCAGTTTTGTTGGGCTATTTGCACTGGTGCCCATGCGAAAGGTGATGATTGTGGACTATAAACTGACCTACCCAAGTGGCACTGCAACTGCTTACCTTATTAACGGATTCCACACACCTGAGGGTGCTGATCTTGCAAAGAAACAAGTCCGGACATTAGGCAAGTACTTTTCGATTAGCTTCCTCTGGGCTTTCTTCCAGTGGTTCTACACTGCTGGGGACAACTGCGGGTTTAGCTCCTTCCCGACATTTGGCCTTGAGGCTTTTAAGAACAGGTTCTATTTTGATTTCTCACCTACCTATGTTGGTGTTGGAATGATCTGCCCCTATATCGTGAATGTGTCTCTTCTCATTGGTGGCATCATCTCATGGGGCATAATGTGGCCACTCATAAGCAAGAAGAAAGGAAGTTGGTACCCCGAGACACTTCCAGAAAGTAGTCTACTTGGACTGCAGGCTTACAAGGTGTTCATAACCATAGCAGTAATTCTTGGGGATGGCCTTTACAACTTTGTGAAGGTCTTCGGCTACACAATCAAAGGCTTCATAGTTATGTATAAGAACAAAAACTCAAACACGCTTCCTATCTCCGACAATGGCACTCCTGCCAACGCCACTGAAGAGGAGTCATTTGATGACAAGCGTCGCAATGAACTATTCCTGAAGGATCAAATTCCCAAGACAGTTGCGATTGGGGGCTATGTTGTTCTTGCAGTTATAACGAGTGGTTGCCTCCCTCTCATTATCCCACAGCTCAAGTGGTACTATATATTGATTGCATATATATTTGCACCTATAATGGCCTTCTGCAATGCCTATGGAAGTGGCCTGACAGATTGGTCCCTCGCCACCACCTACGGTAAGCTTGCAATATTTGTGTTTGGTGCGTGGGCAGGCGCTTCGCATGGTGGTGTGCTTGTAGGACTGGCTGCCTGTGGTGTCATGATGAACATTGTGGGAACAGCTTCTGATCTTATGCAAGACTTCAAGACTGGATATATGACTTTAGCCTCGCCAAGATCCATGTTTGTCAGCCAGGTGATAGGTACTGCCATGGGGTGTGTTATTGCACCCTGCGTCTTCTGGCTGTTCTACAAATCCTTTGATATCGGTGCAAGTGATGGTGCTTACCCAGCACCTTACACCATTATGTACCGTAACATGGCGATTCTGGGTGTCAATGGATTATCCTCATTGCCAAAGTACTGCCTTACACTATGCTACATAGCCTTTGTTGCTGCCTTCATCATCAATCTGATAAAAGACCTGGTACCAGAGAGAGTGGCAAAGTACATCCCGATCCCCATGGCAGCAGCAATTCCTTTCTATCTTGGACCATACTTCGCCATTGATATGTTCATGGGCAGCGTAATTCTCTATTTCTGGGAATGGAGGAACAAAGATGAAGCGCAGTCGTTCGGTCCAGCAGTTGCGTCGGGCTTGATGTGCGGTGATGGGCTATGGGCCCTACCTCAGGCTGTTCTTTCTCTTGTCAACGTGAATCCTCCGCTTTGCATGAAGTTCTTATCAAGGGCTGCCAATGCCAAAGTGGATACATTCCTCGGTAACTAA</cdnaseq>

Protein Sequence

<aaseq>MASAAANNSSSAAYDAAETGGLLRRRNTTAAARGNAGEEEEEAEAVAPSVEQAFADKPVPSWREQLTVRAFVVGFLLSIMFNIIVMKLSLTTGVIPSLNVSASLLGFFLVRLWTAAIERVGFLKQPFTRQENTVIQTCVVSAYGVAFSGGFGSYLFGMSETIAKQATEANDPMNIKNPHLGWIIGFMFLVSFVGLFALVPMRKVMIVDYKLTYPSGTATAYLINGFHTPEGADLAKKQVRTLGKYFSISFLWAFFQWFYTAGDNCGFSSFPTFGLEAFKNRFYFDFSPTYVGVGMICPYIVNVSLLIGGIISWGIMWPLISKKKGSWYPETLPESSLLGLQAYKVFITIAVILGDGLYNFVKVFGYTIKGFIVMYKNKNSNTLPISDNGTPANATEEESFDDKRRNELFLKDQIPKTVAIGGYVVLAVITSGCLPLIIPQLKWYYILIAYIFAPIMAFCNAYGSGLTDWSLATTYGKLAIFVFGAWAGASHGGVLVGLAACGVMMNIVGTASDLMQDFKTGYMTLASPRSMFVSQVIGTAMGCVIAPCVFWLFYKSFDIGASDGAYPAPYTIMYRNMAILGVNGLSSLPKYCLTLCYIAFVAAFIINLIKDLVPERVAKYIPIPMAAAIPFYLGPYFAIDMFMGSVILYFWEWRNKDEAQSFGPAVASGLMCGDGLWALPQAVLSLVNVNPPLCMKFLSRAANAKVDTFLGN</aaseq>

Gene Sequence

<dnaseqindica>1..445#917..1080#1170..1267#1358..1492#1580..1769#1855..2961#ATGGCGTCGGCCGCCGCCAACAACAGTAGCTCGGCCGCCTACGATGCGGCGGAGACAGGCGGCCTCCTCCGCCGCCGCAACACCACCGCCGCCGCCCGCGGCAATGCGGGGGAGGAGGAGGAGGAGGCGGAGGCGGTGGCGCCGTCCGTGGAGCAGGCGTTCGCGGACAAGCCCGTGCCGTCGTGGAGGGAGCAGCTGACGGTGCGCGCCTTCGTGGTCGGGTTCCTCCTCTCCATCATGTTCAACATCATCGTCATGAAGCTGTCCCTCACCACCGGCGTCATCCCCTCGCTCAACGTCTCCGCCAGCCTCCTCGGCTTCTTCCTCGTCCGCCTCTGGACGGCGGCCATCGAGAGGGTGGGCTTCCTCAAGCAGCCCTTCACCCGCCAGGAGAACACCGTCATCCAGACCTGCGTCGTCTCCGCCTACGGCGTCGCCTTCAGCGGTAAAAGATCGAACTCAATCTCTTATTCCTGCTCCACTTCCGTTGCACCGGACCAAGTGGTTTTTGTGCATTCGGTTGTTTGGGAAGATCTTGGCTTTTCACTTTTCAGGGATCTATTTTGGGACATTCTTTTATATAGAAAAATAGATCTGCTAAAGAAAGATATTAGCAATATGTGCTTGTGTTCAGGTCTCTGTGATGATAGATCAAGAGTTATAGCTTAGATTATTTTTCTGAAGGAACAGCGGAGGGTCGCCGATCGATTTTATTAGATCTTTAGACGCAACTCAGGGTACTGCGCAGCATGGAGAACAGACGAGTCCCGAATAGATTAAGATTTTCCACTGAATTGAAGGACTGTCTATGCAAATTTTGGTTATTCCTTTCAGGCTTTTACTGAATGTTTGATACTAAAAATCAATAGAATTGTCTAGCAGTTTTCTTGATTTATAATCTGTTCCAATTGTTCAGGTGGGTTTGGCAGTTACTTGTTTGGTATGAGCGAGACCATAGCTAAGCAAGCAACAGAGGCTAATGATCCGATGAATATCAAGAATCCTCACCTTGGATGGATCATCGGGTTCATGTTCCTCGTCAGTTTTGTTGGGCTATTTGCACTGGTGCCCATGCGAAAGGTATCTATTTCACTTCCTTTCTCTACTCCCATTGTTAACACACAGCATGTCAAAATCTACTTGCTACTCAACTGTAACTCTCTTATCAGGTGATGATTGTGGACTATAAACTGACCTACCCAAGTGGCACTGCAACTGCTTACCTTATTAACGGATTCCACACACCTGAGGGTGCTGATCTTGCAAAGTAAGCAATAAGTCTACCTTTGTTGTTTGTAACAGATTAACAGGTAGAACAAGCAGTACACTGATACGATACAATCGTTGACTGTTTCAGGAAACAAGTCCGGACATTAGGCAAGTACTTTTCGATTAGCTTCCTCTGGGCTTTCTTCCAGTGGTTCTACACTGCTGGGGACAACTGCGGGTTTAGCTCCTTCCCGACATTTGGCCTTGAGGCTTTTAAGAACAGGTTGATATGACTACATCTCTTTCAGCATCAGCAGCTGTGTCGATATACACTTGAAATTACTGATATTCAACTGTTCACATCTTCCAGGTTCTATTTTGATTTCTCACCTACCTATGTTGGTGTTGGAATGATCTGCCCCTATATCGTGAATGTGTCTCTTCTCATTGGTGGCATCATCTCATGGGGCATAATGTGGCCACTCATAAGCAAGAAGAAAGGAAGTTGGTACCCCGAGACACTTCCAGAAAGTAGTCTACTTGGACTGCAGGCTTACAAGGTTAGTGTAGGATCCTTTTTTTTTTTCTTTTGTAAACATTCTAGCTGTCCAGACTCCAGAAACTGACATGCTAAGAATGATGCAGGTGTTCATAACCATAGCAGTAATTCTTGGGGATGGCCTTTACAACTTTGTGAAGGTCTTCGGCTACACAATCAAAGGCTTCATAGTTATGTATAAGAACAAAAACTCAAACACGCTTCCTATCTCCGACAATGGCACTCCTGCCAACGCCACTGAAGAGGAGTCATTTGATGACAAGCGTCGCAATGAACTATTCCTGAAGGATCAAATTCCCAAGACAGTTGCGATTGGGGGCTATGTTGTTCTTGCAGTTATAACGAGTGGTTGCCTCCCTCTCATTATCCCACAGCTCAAGTGGTACTATATATTGATTGCATATATATTTGCACCTATAATGGCCTTCTGCAATGCCTATGGAAGTGGCCTGACAGATTGGTCCCTCGCCACCACCTACGGTAAGCTTGCAATATTTGTGTTTGGTGCGTGGGCAGGCGCTTCGCATGGTGGTGTGCTTGTAGGACTGGCTGCCTGTGGTGTCATGATGAACATTGTGGGAACAGCTTCTGATCTTATGCAAGACTTCAAGACTGGATATATGACTTTAGCCTCGCCAAGATCCATGTTTGTCAGCCAGGTGATAGGTACTGCCATGGGGTGTGTTATTGCACCCTGCGTCTTCTGGCTGTTCTACAAATCCTTTGATATCGGTGCAAGTGATGGTGCTTACCCAGCACCTTACACCATTATGTACCGTAACATGGCGATTCTGGGTGTCAATGGATTATCCTCATTGCCAAAGTACTGCCTTACACTATGCTACATAGCCTTTGTTGCTGCCTTCATCATCAATCTGATAAAAGACCTGGTACCAGAGAGAGTGGCAAAGTACATCCCGATCCCCATGGCAGCAGCAATTCCTTTCTATCTTGGACCATACTTCGCCATTGATATGTTCATGGGCAGCGTAATTCTCTATTTCTGGGAATGGAGGAACAAAGATGAAGCGCAGTCGTTCGGTCCAGCAGTTGCGTCGGGCTTGATGTGCGGTGATGGGCTATGGGCCCTACCTCAGGCTGTTCTTTCTCTTGTCAACGTGAATCCTCCGCTTTGCATGAAGTTCTTATCAAGGGCTGCCAATGCCAAAGTGGATACATTCCTCGGTAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016787

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016787&oldid=65681"