BGIOSGA016806

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Revision as of 04:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016806| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016806, complete gene.| tag = OsI_167...")
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Gene Name

BGIOSGA016806

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016806, complete gene.

LocusTag

OsI_16737

Ensembl Transcript ID

BGIOSGA016806-TA

Ensembl Protein ID

BGIOSGA016806-PA

Length

5026

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25217118..25222143

Sequence Coding Region

25217118..25218434,25220156..25220246,25220364..25220521,25220606..25220704,25220930..25221023
,25221590..25222143

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25217118..25222143 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25217118..25222143 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGGCGCCGAGGAGGAGGAGGAGGAGGAGGAGCTCTTCTATGAGGCGCGGGACCGCGTGCTCTCCTCCTCCTCCTGCTCCTCCACCTCGGCCTCGGACGACGACGACCACCCGCGGCGAGGTCGGGATGCGGCGGCTGCTGCTGCTGCGGCGGCGGCGGCGGCGCTCGACGTGTGGACGTCGGAGCCAGCGCCCGTGCAGGAACGACGCCGGAGGCTTCTCCAGATGATGGGGCTCTCCGGTGACCCCTCTCTGGCGCGCCTCGAGATGGGTCGATCGGCCTCCTACGACGGGCCCATCCGGCCGGAGACGGTGTCGCCCATCTCCCGATCCAGATCGGATGGCAGCGTGCCGGCCTCCGCCACCAAGCCCCCGCTCGCGGCCCGGTCGCGCCAAACATCGTCCGACTCCTCCGAGGCCACGCCAGGGGGAGATGACGCGGACCCCAGGTGCCTAATCCGAAACCTCGACGACGGCAGCGAGTTCGTGGTGAAGGAGGAGTCCGCGCTCCGCGAGGTGGGCACGGGGAGGCAGCTCACCATGGAGGAGTTCGACCTCTGCGTCGGTCGCTCCCCCATCGTCCAGGAGCTCATGCGCCGCCAGAACGTGGCAAGCTCCGGTTCGAGCAACGGAGCGTCCGCTCTCATCCAGAGGTCCAGCTCTGATTCAAGCAACGGCGCGACGCGCCACAGGCGGCGCGGCAGCTGGCTCCGGAGCATCCGCAACGTCGCTGGCTCCATGGTGGTCGGCTCCCGCGACCGCCGAAGCAGCGACGAGAAGGACACCTCCTCGGAAAAGGGAGGGCGTCGGTCCAGCTCAGCCACAGACGACAGCCAGGAAAGTGCCAGCGCCGTGCGCCGTGGCCCGGAGCGTGTCAAGGTACGGCAGTACGGGAAGACATGCAAGGAGCTCAGTGGGCTGTTCATGAACCAGGATATACAGGCGCACAACGGGTCCATCTGGAGCATAAAGTTTAGTCACGACGGGCGGTACCTCGCGAGTGCTGGGGAGGATTGCGTGATCCATGTCTGGGAGGTGTCGGAGCTTGAGAGGAAACGGGAGGGAAATGGGGTGTGCAATCAACTTGTTGCCGTCGTGTGCAATGGTTCGCCGGAGCCGATATTGGCATTGGCAAGTGTTGATGGAAGCTGTTGGGAGAAGAAGCATCGGGCTAGAATCTTGGAAACTCGGAAGTCTGCGAGCTCTGACCGGTTGATGTTTCCAGAGCATGTGTTCGCACTATCAGAAAAACCGGTCAAAACTTTTGAGGGGCATTCGGAGGATGTGCTTGATCTCTGCTGGTCTAAATCTCAGTACTTACTTTCATCTTCAATGGATAAAACAGTGAAGTTATGGCATATGTCAAGAACTTCATGTTTGAAAACATTTTCACATAGTGACTATGTGACATGCATCCAATTCAACCCTGTTGATGATAGATACTTCATTAGTGGTTCTCTGGATGAAAAGGTTCGCATATGGAGCATTCCGGGACGTGAAATTGTTGATTGGAATGATCTGCATGAAATGGTCACTGCTGCTTGCTATACACCTGATGGACAGAGAGCATTAGTCGGTTCCCACAAGGGCAGCTGTCATATTTATGATACATCTGGTATATCTCACCCTCTCATGATCCTCATATCTTATGAGTGTATTTCTTTTCTCCCAGGAAGTTCTTCAAAGGTGCTCATCACATCTGCAGATTCACGAATACGAGTTGTTGATGGTTTTGAACTAGTTCATAAATTCAAAGGTTTTCGAAATACCAACAGCCAAATATCAGCTTGCCTGTCTTCGAACGGGAGGTATGTGATCTCTGCGAGTGAGGATTCCCATGTGTACTTCTGGAGAAACGATGACAATTCTGCACAGGGCAGAAGCAAGGCCGTTGTGTCTGTCACAAATTCGTATGAACACTTCCACTGCCAGGATGTGACTGTAGCTGTTGCTTTGCCATCTGCTGGATCAGCAATGACGTCCAGAACAAATTCCAGGAAGACCGAGGAGCAGGATAGCATACCGCAGCAGCACACTCAACCTGACAAACAGCAAGATTCCTCTGATTTCCAATGCCTAAGCGGCAACGGCCTAAGCACTAGTTCAAACCACAGTGGTGACAGAACATCTGCAACTTGGCCTGAAGAGTTGATGACACCAAGTAAGCAGAGCCCTCCGTCCAGTACCAGCCTTCCCAACGGTGCTGGCCAAGCACCAAGCCGGTCGGCCTGGGGTTTAGTGATCGTCACGGCAGGCCGTGGAGGCCAGATCAGAGCATTTCAGAATTTTGGGTTTCCTGTTCGAGTATAG</cdnaseq>

Protein Sequence

<aaseq>MSGAEEEEEEEELFYEARDRVLSSSSCSSTSASDDDDHPRRGRDAAAAAAAAAAAALDVWTSEPAPVQERRRRLLQMMGLSGDPSLARLEMGRSASYDGPIRPETVSPISRSRSDGSVPASATKPPLAARSRQTSSDSSEATPGGDDADPRCLIRNLDDGSEFVVKEESALREVGTGRQLTMEEFDLCVGRSPIVQELMRRQNVASSGSSNGASALIQRSSSDSSNGATRHRRRGSWLRSIRNVAGSMVVGSRDRRSSDEKDTSSEKGGRRSSSATDDSQESASAVRRGPERVKVRQYGKTCKELSGLFMNQDIQAHNGSIWSIKFSHDGRYLASAGEDCVIHVWEVSELERKREGNGVCNQLVAVVCNGSPEPILALASVDGSCWEKKHRARILETRKSASSDRLMFPEHVFALSEKPVKTFEGHSEDVLDLCWSKSQYLLSSSMDKTVKLWHMSRTSCLKTFSHSDYVTCIQFNPVDDRYFISGSLDEKVRIWSIPGREIVDWNDLHEMVTAACYTPDGQRALVGSHKGSCHIYDTSGISHPLMILISYECISFLPGSSSKVLITSADSRIRVVDGFELVHKFKGFRNTNSQISACLSSNGRYVISASEDSHVYFWRNDDNSAQGRSKAVVSVTNSYEHFHCQDVTVAVALPSAGSAMTSRTNSRKTEEQDSIPQQHTQPDKQQDSSDFQCLSGNGLSTSSNHSGDRTSATWPEELMTPSKQSPPSSTSLPNGAGQAPSRSAWGLVIVTAGRGGQIRAFQNFGFPVRV</aaseq>

Gene Sequence

<dnaseqindica>1..1317#3039..3129#3247..3404#3489..3587#3813..3906#4473..5026#ATGAGCGGCGCCGAGGAGGAGGAGGAGGAGGAGGAGCTCTTCTATGAGGCGCGGGACCGCGTGCTCTCCTCCTCCTCCTGCTCCTCCACCTCGGCCTCGGACGACGACGACCACCCGCGGCGAGGTCGGGATGCGGCGGCTGCTGCTGCTGCGGCGGCGGCGGCGGCGCTCGACGTGTGGACGTCGGAGCCAGCGCCCGTGCAGGAACGACGCCGGAGGCTTCTCCAGATGATGGGGCTCTCCGGTGACCCCTCTCTGGCGCGCCTCGAGATGGGTCGATCGGCCTCCTACGACGGGCCCATCCGGCCGGAGACGGTGTCGCCCATCTCCCGATCCAGATCGGATGGCAGCGTGCCGGCCTCCGCCACCAAGCCCCCGCTCGCGGCCCGGTCGCGCCAAACATCGTCCGACTCCTCCGAGGCCACGCCAGGGGGAGATGACGCGGACCCCAGGTGCCTAATCCGAAACCTCGACGACGGCAGCGAGTTCGTGGTGAAGGAGGAGTCCGCGCTCCGCGAGGTGGGCACGGGGAGGCAGCTCACCATGGAGGAGTTCGACCTCTGCGTCGGTCGCTCCCCCATCGTCCAGGAGCTCATGCGCCGCCAGAACGTGGCAAGCTCCGGTTCGAGCAACGGAGCGTCCGCTCTCATCCAGAGGTCCAGCTCTGATTCAAGCAACGGCGCGACGCGCCACAGGCGGCGCGGCAGCTGGCTCCGGAGCATCCGCAACGTCGCTGGCTCCATGGTGGTCGGCTCCCGCGACCGCCGAAGCAGCGACGAGAAGGACACCTCCTCGGAAAAGGGAGGGCGTCGGTCCAGCTCAGCCACAGACGACAGCCAGGAAAGTGCCAGCGCCGTGCGCCGTGGCCCGGAGCGTGTCAAGGTACGGCAGTACGGGAAGACATGCAAGGAGCTCAGTGGGCTGTTCATGAACCAGGATATACAGGCGCACAACGGGTCCATCTGGAGCATAAAGTTTAGTCACGACGGGCGGTACCTCGCGAGTGCTGGGGAGGATTGCGTGATCCATGTCTGGGAGGTGTCGGAGCTTGAGAGGAAACGGGAGGGAAATGGGGTGTGCAATCAACTTGTTGCCGTCGTGTGCAATGGTTCGCCGGAGCCGATATTGGCATTGGCAAGTGTTGATGGAAGCTGTTGGGAGAAGAAGCATCGGGCTAGAATCTTGGAAACTCGGAAGTCTGCGAGCTCTGACCGGTTGATGTTTCCAGAGCATGTGTTCGCACTATCAGAAAAACCGGTCAAAACTTTTGAGGGGCATTCGGAGGATGTGCTTGATCTCTGCTGGTCTAAATCTCAGGTAATGTTACAAGGTTTCTGTTCATTCAAAATTCCTCCACTGTTGATGCTCCTTGAATACTCCTATAAAGGAAAAAGGGTGAAGGTTGAACATAATCTCACAACCTAAATTCCACTAAAATTTAGTAGTGACAGAGTGTGCTTCTTAACTCTCAGTTAATTTCAACTATAGTCTTAACATCTATGGTGAAACCTCGAAGTGCATTGTTTTCCATCAAACCATCTTTGTCATAACTGTTAGTCCAACTGTGTCAGAACAAGACACTGGCATCGAGTAGTCAAGGGCTGGTACAGTTCAATCCTTATCACACTTTGGTGTAGTTCTTCTGAAACATGGAGCATATTGATGCAAATTGGTGTCCTTTAGCTCTGAACTAATCCTTCTTTGTTCATTGGAAGGAAGGTTAGAAGTGCATAAGCAGCAATCTGGCGAATTGCCTGCCTATCGATTGCATCATATAGAAGAGGCACTGCCCAAATTCTGCCATAGACTAGTTACTTACCATGTCCAAGCTCATCAATTCTATTATATCTGTTACATGATGTGACATGAATACTCCTGTTTTTCATTTAGTGACTAAATTTTAGAAATGATTCACTAATAAGATACACAGGAATGCTATGATCTACCTTTCAGCATGCTGTAATCCCTAAAATGGCGATAATGTAACAATTAGAAAAATAAGTTTGTTGGATTATGTCCTATGAATCAATGTAAAATATGTTGTTCTGCAAAATCCATTTAGCCTTAATATAATCTCCCATACTAGTACTAGTAGATAATATAAATATATTTGAGGAGTTTCAGCCTTCTTTTGGTACTACGTTACAGGTTATTTCATTTATTCATGTTTAAGATGGATATAGGTTTCAATAAAGGTCCCGATGCATGACTCTGGTGACTCCTGTATACATAGATGAAGTTAACTTGGTACCATGTTATATCATTATTTGTCCAAAGTAGGACTGTCAGGAAATCCTTCTAGCATGTTTCATATTCAGCATGGCATGCTGCATAACATGGATGACATATGTTGCTTGACCAATTGACTTTGAATTTCATGCGCATCAGTAACTTATGGAGTTATGGTCTAGAAACCAGGACTCGCATCATCAACTATGTATTGAAATTTCAGATGTCTATTGAGAGAATGTTAGTTCATCCTACTAGCAGTTCATTGCCCTTTGAAAGTCCAAATGCATGATCAGATGCTCCTAATTTGTTGGGCCCTTGTTGTAAGAAGATGTTAGTATCTAATTGGCTTTACATTGTGTTTGGCTGGAGAAGATAGGAACTTCTCCCAATGCATGCAAAACGGAGCGGCTCATTAGCACATGATTAATTAAGTATTAGCTTAAAAATGAAAAATGGATTAATATGATATTTAAATTAACTTTTTTTTTTTTTGCAAAAAACCACACCATTTAGTAGTCCGGGAAGCATGCTCATGGAAAACGAGAAAGTAGAAGATGGGAAGAGGGAGTATTGAACACACCCAGAGGGTAGTTACCTTTTGCAGCTAGTTATACATATATGGTTTCTATATACCTTATGTGGCTAGTTACATATCCAGACTTCACATTTGTCAACAACAGTTACATGCTTCCAGCAATGCATCCCCAAATTATGATTGCTACAATTCCATGAATCTTGTAGTGGTATTCTTATGGTTTTGTAGCTATTCCAGATTTTAATTTCTTTCTTTTTCAAACATCGTGCAGTACTTACTTTCATCTTCAATGGATAAAACAGTGAAGTTATGGCATATGTCAAGAACTTCATGTTTGAAAACATTTTCACATAGTGACTATGGTAAGATCTCGAGTTGACATTAGCAGTTTTGCGTGTTCTCTCTCTCCCCCAAGCACATATGACGTTTCTCACTCTGCGAACATACTCTAAATTTTCCTTTGCTGCTTTGCGTTTCAGTGACATGCATCCAATTCAACCCTGTTGATGATAGATACTTCATTAGTGGTTCTCTGGATGAAAAGGTTCGCATATGGAGCATTCCGGGACGTGAAATTGTTGATTGGAATGATCTGCATGAAATGGTCACTGCTGCTTGCTATACACCTGATGGACAGGTTTCTACACTATATACTGATGTATGTGACCGAAAAGGTCTTTTTGTATGTTAGCTCTAATACCTTGTCTCATATTTTCTGAAGAGAGCATTAGTCGGTTCCCACAAGGGCAGCTGTCATATTTATGATACATCTGGTATATCTCACCCTCTCATGATCCTCATATCTTATGAGTGTATTTCTGTATGTTTTTGGCTTACTTTTCCTTCAGGAATAACCTGTCTCTCGATCTTATGGCCAGATAATAAGCTTCTCCAAAAGAAACAGATTGACTTGCAAAATAAGAAAAGGAAGTCCAATCAGAAGAAAATCACAGGGTTTCAGGTGCTTCTAACACACTTTTGAATATGAAGCAAACTATGTGCAGATCACAGATCTTCTCTTACTGAATTGTAGTTCCTTGAATAGTTTCTCCCAGGAAGTTCTTCAAAGGTGCTCATCACATCTGCAGATTCACGAATACGAGTTGTTGATGGTTTTGAACTAGTTCATAAATTCAAAGGTATTAAGTTTTGTGCCTTGGAACTTATTCATATCAGATTGTTTTTGTTCAAGGTTTAGTATCCTTTTTCTCAGATATACAAATACTCCTGAATGTTACTTACCTGCTTCTTTTCGGTTGTACTAAGTACAGTCCCAGTCAAACTTCTTATTCATCCATAAACCACCTTTGTTACTTGTTACTTTTACCACTCCTTTTTTTGTTGCAGTGTTGCACTGGAATCCAGGTGTATAGAGTTATGCTAGGAAGTCATAATAGGTCTGCAGTAACCAAATCATGCTGTGATCATCAGATCACAAATACTGCAATTCCCTGCTCATTGATTAAAATTTTGAACGTGACTAGTTAAAACTAGTTTCTCCTGTCGTTTTCTTTCAACAAAGTGCCAAAACTGTCAGAATCCACTTTGTTGAGGCAATAGTTGTAATGTTCACTTAACATGTTATAAAATAGTTATATCCATCTTTCGATGAGTCCAATTTCTGTATACCTTTCCCCGTGACCTTCTATCATTGGTTGTTTTGAGTTTAACGTCTTCTGAATTCTGATACCATGCACCGTTTCAGGTTTTCGAAATACCAACAGCCAAATATCAGCTTGCCTGTCTTCGAACGGGAGGTATGTGATCTCTGCGAGTGAGGATTCCCATGTGTACTTCTGGAGAAACGATGACAATTCTGCACAGGGCAGAAGCAAGGCCGTTGTGTCTGTCACAAATTCGTATGAACACTTCCACTGCCAGGATGTGACTGTAGCTGTTGCTTTGCCATCTGCTGGATCAGCAATGACGTCCAGAACAAATTCCAGGAAGACCGAGGAGCAGGATAGCATACCGCAGCAGCACACTCAACCTGACAAACAGCAAGATTCCTCTGATTTCCAATGCCTAAGCGGCAACGGCCTAAGCACTAGTTCAAACCACAGTGGTGACAGAACATCTGCAACTTGGCCTGAAGAGTTGATGACACCAAGTAAGCAGAGCCCTCCGTCCAGTACCAGCCTTCCCAACGGTGCTGGCCAAGCACCAAGCCGGTCGGCCTGGGGTTTAGTGATCGTCACGGCAGGCCGTGGAGGCCAGATCAGAGCATTTCAGAATTTTGGGTTTCCTGTTCGAGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016806