BGIOSGA016826
| Gene Name |
BGIOSGA016826 |
|---|---|
| Description |
cDNA clone:J033116K10, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA016826, complete gene. |
| LocusTag |
OSJNBB0039L24.22 |
| Ensembl Transcript ID |
BGIOSGA016826-TA |
| Ensembl Protein ID |
BGIOSGA016826-PA |
| Length |
4348 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:25423752..25428099 |
| Sequence Coding Region |
25423752..25423889,25425374..25426032,25426416..25426608,25426688..25426752,25426867..25427077 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome04:25423752..25428099 source=RiceIndica04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome04:25423752..25428099 source=RiceIndica04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGGCGGCGGCGGACTTCCGGCGGCCCACACCCAAGTTCGTCGCCGCGTTGTCGAGGACGAGCTCCGCGTTCCTCTTCTTCTCCGTCGTCGTCGTGGGGTTGGTCTCGTCTGCTCGTTGGATCACCAGGTTCACGTTGCAGGCGAGCCCCCCAGCCACGGCGGCCATTCCCGCCGCCGTCGCCGCCACTACCCGCGCCGGAGTACCAGCGGCGCCGCCGCATCCCACCTACTCCATCTCCTGCTCCACGCCGCCGCGCCCCCCGCTTAACCTCTCCGGTGGTGGCGGCGCCAGAACGCCCCAAACCTCCCAAACCCTCGCGCTCGCGCTCTCCTCCTCCTCGTCCTCCTGTCGCTCCTCCCCTGACCCCGCCACCGCCTCCGCCTCCGTCTCCGCCTCCAATTCCTCCTCGTGCCCCTCCTACTTTCGCTTCATCCACGAGGACCTCCGCCCATGGCGCGACGCTGGGGGAATCACCCGCGCCATGCTGGCGCGCGCTCGCGTCACCGCCAGCTTCCGCCTCCTCGTGCTGGGCGGCCGCGCCTTCGTGCATCGGTTCCGCCCGGCATTCCAGACCCGCGATCTCTTCACCATCTGGGGCGTCCTCCAGCTGCTCCGCCGCTACCCCGGGCGGGTCCCCGACCTCGACCTCATGTTCGACTGCGCCGACTGGCCCGTCGTCCGCACGCACCTCTACCGCGGGAAGCACGCTGCCTTCATGCCTCCACTGTTCAGCTACTGCGGGGATGACAGGACTCTGGATATCGTCTTCCCGGACTGGTCATTTTGGGGCTGGCCAGAGATCAACATAAAGCCGTGGGATGCCCTGCGGCAAGACCTGAAGGATGGCAATAATAGGGTGAAATGGTTGGATAGAGTACCTTATGCATACTGGAAAGGAAATCCAGCAGTTGCTGTGACACGGCAGGAATTGGTTAACTGTAATGTCTCTACTACAAAAGATTGGAATGCCAGGATCTACAAACAGGATTGGTTCAGAGAGAGCAAGGCAGGGTACAAGGACTCAAATTTGGGTAGTCAATGCACGCACAGGTACAAGATCTATATAGAAGGGTCAGCATGGTCAGTCAGTCAGAAATATATTCTAGCATGTGATTCAATGACACTGCTGGTTACACCAAGATACTATGATTTCTTTTCGAGGTCACTTATGCCGATTCAGCATTATTGGCCTGTTCATAATGACAATAAATGTGACTCCATAAAATATGCAGTTGACTGGGGCAACTCTCACAAGCAATTGGCACAGCGCATAGGAAAACAAGCCAGTGATTTCATCGAAGAAGATGTTAATATGGACCGTGTTTATGATTACATGCTTCACCTTCTAACTGAATATGCCAAGCTCCTAAGGTTCAGGCCAATTAAACCACCTGAAGCTGTTGAGATCTGTCCTGATTCTTTGGCCTGCCAAGCTGAAGGCCTTGAGAAGAAGTTTCTTATGGAATCCATGGTGAAGTCTGCCCGTGATGCAGGTCCGTGTGATCTGCCACCTCCTTTCAACCCTCAAGAGCTCGCAATGATTAAGCGAAGGAAGGACAATTCGATCAAGCAGATTCAAACATGGGAGAGAATATCTGGGAGGGCTTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAADFRRPTPKFVAALSRTSSAFLFFSVVVVGLVSSARWITRFTLQASPPATAAIPAAVAATTRAGVPAAPPHPTYSISCSTPPRPPLNLSGGGGARTPQTSQTLALALSSSSSSCRSSPDPATASASVSASNSSSCPSYFRFIHEDLRPWRDAGGITRAMLARARVTASFRLLVLGGRAFVHRFRPAFQTRDLFTIWGVLQLLRRYPGRVPDLDLMFDCADWPVVRTHLYRGKHAAFMPPLFSYCGDDRTLDIVFPDWSFWGWPEINIKPWDALRQDLKDGNNRVKWLDRVPYAYWKGNPAVAVTRQELVNCNVSTTKDWNARIYKQDWFRESKAGYKDSNLGSQCTHRYKIYIEGSAWSVSQKYILACDSMTLLVTPRYYDFFSRSLMPIQHYWPVHNDNKCDSIKYAVDWGNSHKQLAQRIGKQASDFIEEDVNMDRVYDYMLHLLTEYAKLLRFRPIKPPEAVEICPDSLACQAEGLEKKFLMESMVKSARDAGPCDLPPPFNPQELAMIKRRKDNSIKQIQTWERISGRA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..138#1623..2281#2665..2857#2937..3001#3116..3326#4001..4348#ATGGCGGCGGCGGCGGACTTCCGGCGGCCCACACCCAAGTTCGTCGCCGCGTTGTCGAGGACGAGCTCCGCGTTCCTCTTCTTCTCCGTCGTCGTCGTGGGGTTGGTCTCGTCTGCTCGTTGGATCACCAGGTTCACGGTGAGTTCGAAACCTTCTGATTCCCTTAATCCCGTGTCTCGTTCTTGCTGGATGATCGATCGGTACATCATTCTCAATGGATGATACAAAGCTCTAGAATTCCTCTTCGAGCTTATGGAACCAGATTGCAACATGGTTTCTTGTTGATCTGACACACGATGCTACAGCTAATTCAATGATTCTGCTCTGCACCGACTGTAGTCTGTAGTTATGCCGCGCATATGAGGGCCATGACATGAACATCTTTAGTTCTTTGACCGAGAACCACTGTAACCAAGTTAATTTTCTCTCCTCTCTCTAACGAACTGCATCACGAATTCACGATTATGATTGTGCCCCTATAATCCCAAATTAGTTGACTCGAGGAAGCACCCGCCACTGTTCGTGTAATGAGCACCGGAAACGCGAGACAGCCGAAACTGTCCGGCGTCTTCGTGAATGGTGGTGGCTAGGGTTTTATGGCATTTTAGTCTTCCTGGTCCGTCTGCCATTTCGCCGTCGCCGGCTAGGACCACCTCCCACCGGTGCAGAAAGCCACCATGCCAGTAGGTAGGTAGGCTTCTTCTTTTCCATTTTCTGTCATTAAGGTGGTGTTTGGATACAGGGACTTAACTTTAGTCCCTATATTTAGACACTAATTTAAAGTATTAAATATAGACTACTTACAAAACTAATTATATAAATGAAAGCTAATTTGCGAGACAAATTTTTAAAACCTAATTAATCAATAATTAGATAATGTTTACTGTAGCATTACATAGGCTAATCATTGATTAATTAGACTCAATAGATTCGTCTATTAAATTAGTCTAAGATTATGGATGTGTTTTATTAATAGTCTACATCTAATATTTATAATTATTGTTCAAACATCCGATGTGATAGGGACGTTTTAGGCCTTACTCCGTGTTGTGCCCCTCACGTCACGGTGCTCGTTCATGCCCGCCGCGCCCACACTATGCGCTTATTTTAGAGGCGCTAGCTGCCTAGCTCAGCATTCATACATTCAGTGGCTGATCAGTGCAAACAGCATAGAACTGCGTAATTTTATCTGCTTCCCTTCCAATTCCGTTCAGAATACGGAAAATGAACCCTGAAAGAGGGGGGATAGAGTTTTCGAGAGGATGGTGATCTAGGATCACGAGAGCTCGTGCAATAGAAAAGACGAGAAGAACAAAAGAGGAGGCCTCACGGGGAGAGTGAGAGCTGGTCGGATCGGATTGGATGCTGGAAGTTGGAACTTGAACCAACGCCGCAGCTGTGACGCATGGCTCTCGTCTCTCGAGATAACCATGGTGCCACTGAGCTAATCCGTGGGCGTTCGCGGGTCGTTGTTACTGGCCGGGCTTCACGGTTTATCATATTTACGGGCCACATTTGGGCTGCGTGGTCCATCAATATTAAGGCCCATAGATGCAATTCTTTTGGGCTCATGCGATTTATTGTTCCTTTTTTCTTCTCGCCGTGATCGTTCCTCTTTGCAGTTGCAGGCGAGCCCCCCAGCCACGGCGGCCATTCCCGCCGCCGTCGCCGCCACTACCCGCGCCGGAGTACCAGCGGCGCCGCCGCATCCCACCTACTCCATCTCCTGCTCCACGCCGCCGCGCCCCCCGCTTAACCTCTCCGGTGGTGGCGGCGCCAGAACGCCCCAAACCTCCCAAACCCTCGCGCTCGCGCTCTCCTCCTCCTCGTCCTCCTGTCGCTCCTCCCCTGACCCCGCCACCGCCTCCGCCTCCGTCTCCGCCTCCAATTCCTCCTCGTGCCCCTCCTACTTTCGCTTCATCCACGAGGACCTCCGCCCATGGCGCGACGCTGGGGGAATCACCCGCGCCATGCTGGCGCGCGCTCGCGTCACCGCCAGCTTCCGCCTCCTCGTGCTGGGCGGCCGCGCCTTCGTGCATCGGTTCCGCCCGGCATTCCAGACCCGCGATCTCTTCACCATCTGGGGCGTCCTCCAGCTGCTCCGCCGCTACCCCGGGCGGGTCCCCGACCTCGACCTCATGTTCGACTGCGCCGACTGGCCCGTCGTCCGCACGCACCTCTACCGCGGGAAGCACGCTGCCTTCATGCCTCCACTGTTCAGCTACTGCGGGGATGACAGGACTCTGGATATCGTCTTCCCGGACTGGTCATTTTGGGGCTGGTAATATGCTTGCTCGTCTTCTGCATTTCTGTTACCATTATGAAGATTATATGATAATTTTCTTTTGGCCTCTTTCGGTCTAAAGAACATGATACAGAAACAAGTATAAGATTTCTTTGTAGGATCGAAATTCTACTGTATAGTGCATTGTTCGCTCAATCCACACAATAGGAAATTGCTAGTACCTAGTGCTTTCAGTATTATTAATAGGATACTCAGATACTTGGGGGATTGCAAACCCGTAGGATGTTTGGCTGTGCCATGTGCATATTTTTTTTACATAATGGATAGAAATCCGGCCTCTATATACACGGGTGGATATACACAGCCATTGCCATGTGCATATGGAGTTTAGTCACTCTAACAAGTATCACGGTTGGTAGGCCAGAGATCAACATAAAGCCGTGGGATGCCCTGCGGCAAGACCTGAAGGATGGCAATAATAGGGTGAAATGGTTGGATAGAGTACCTTATGCATACTGGAAAGGAAATCCAGCAGTTGCTGTGACACGGCAGGAATTGGTTAACTGTAATGTCTCTACTACAAAAGATTGGAATGCCAGGATCTACAAACAGGTACTTCTTGCATATGCATGAGTACATGGTTGAATTTTTCATACTTTTTACATTAAAACTGTTTTATGTTGTGCTGTAGGATTGGTTCAGAGAGAGCAAGGCAGGGTACAAGGACTCAAATTTGGGTAGTCAATGCACGCACAGGTCTTATCTGTTTTTTTGTTGTTGTTGTTTTTTCTGGTGATAGTAACTTATCAAGGATCTATGCAATTTTATTTTCGGTGTCTAAGTTAATGATGTGTAGTTCGTATTTAACAGGTACAAGATCTATATAGAAGGGTCAGCATGGTCAGTCAGTCAGAAATATATTCTAGCATGTGATTCAATGACACTGCTGGTTACACCAAGATACTATGATTTCTTTTCGAGGTCACTTATGCCGATTCAGCATTATTGGCCTGTTCATAATGACAATAAATGTGACTCCATAAAATATGCAGTTGACTGGGGCAACTCTCACAAGCAATTGGTACCTATCGTCTATCTATTTACACCTACACCTGTAGACAATTGAGTTTTGCAATGCTTAATAGTATAGATGGAACTTATCACAACAAACTCAGTTGAATACTAATAGAAATCCGCTCAAGCTGCAATATATGTAAATGCAAGCTGCCAGATTGTTCTAGAGCATCTATGTTTCACTAGGACATAATTAAAACTGGTTCAGATTATGAGCTTGTATGATGCTATGAAATTATACCGCAAACAATTTGTGCCCCCTAACAGTGCACTGATAAATTATAGGTTATGGTATATTTTTCATATTTTGTTGGACAGTAAATAATCCCAACATTTTTCATGATGTAAACTGTGATTTATTGGGTTAAGCATTGTTAGCTAGAAATATTTATCCAAACTGTTCTTCATCTTCACTTGAAATTGTCAATTCTGGAAAAAATCCCTGCTGCTCGAAGAATTGTGTTACAACTTCTTTTTATTTTTGACAACGAGCACTTGGAGCTCTTGCATTGGACTTTATAAATTTCTTAAATGACGAATATATTGAGCAGAATACTGAGCAATTTACTATGTCTTTATGTTACAGCACACCGCATTGTTTAATTGTTGCCTTTTTTTTTAGGGATATATCACATGTTTCTGCTTGATAAAATATGGCCCCATACTCTAAATCTGTCATAGGCACAGCGCATAGGAAAACAAGCCAGTGATTTCATCGAAGAAGATGTTAATATGGACCGTGTTTATGATTACATGCTTCACCTTCTAACTGAATATGCCAAGCTCCTAAGGTTCAGGCCAATTAAACCACCTGAAGCTGTTGAGATCTGTCCTGATTCTTTGGCCTGCCAAGCTGAAGGCCTTGAGAAGAAGTTTCTTATGGAATCCATGGTGAAGTCTGCCCGTGATGCAGGTCCGTGTGATCTGCCACCTCCTTTCAACCCTCAAGAGCTCGCAATGATTAAGCGAAGGAAGGACAATTCGATCAAGCAGATTCAAACATGGGAGAGAATATCTGGGAGGGCTTAG</dnaseqindica> |
| External Link(s) |
