BGIOSGA016830

From RiceWiki
Revision as of 04:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016830, complete gene.| tag = OsI_167...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016830, complete gene.

LocusTag

OsI_16780

Ensembl Transcript ID

BGIOSGA016830-TA

Ensembl Protein ID

BGIOSGA016830-PA

Length

3055

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25461568..25464622

Sequence Coding Region

25461568..25461678,25461828..25461902,25463636..25463786,25463938..25463980,25464299..25464348
,25464435..25464475,25464578..25464622

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25461568..25464622 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25461568..25464622 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACAGAAAGGAGGCAATTAAAACTGTGTATCGTGAAGTTGGTGGTGAATGTAAAGATGGATCAACTATTGGTATTGACATGAATTCCCATAACACATCAGTTAAGGAGTGCTTGAGCAAAACAGAGGTTGTGACTACCGACTCCTGCCCAGACCGTGTAATCATCCCAGACCCTACACCTAAGAAGATCTTCATGGATACGACTAGGCTGCTTGCAAAGCACACAAATGATCTGGTTGGTGAGATTTGCAATTACATAAAACATGGGAAACTTCTGCAGACTGCAGTTTTGCTCCTGGCAGCTCAAGAGCATATCCGGGGTAGCAAAAGAAATGGGCTGGTAAAGCTCTTGGTCAATGCATTCAAAGGCATTCAAAGCTCCCGCTACGACTGCCCCTTGCCCAGTGGACTCATACTTGACGAATTTGGGACTACTGTAGCTACTCATCTGCATGCTGGAAAGGAAAAGGGCACTGAATCCACTGACTTTGTGCCAAGTGGCCTTGATTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MHRKEAIKTVYREVGGECKDGSTIGIDMNSHNTSVKECLSKTEVVTTDSCPDRVIIPDPTPKKIFMDTTRLLAKHTNDLVGEICNYIKHGKLLQTAVLLLAAQEHIRGSKRNGLVKLLVNAFKGIQSSRYDCPLPSGLILDEFGTTVATHLHAGKEKGTESTDFVPSGLDS</aaseq>

Gene Sequence

<dnaseqindica>1..111#261..335#2069..2219#2371..2413#2732..2781#2868..2908#3011..3055#ATGCACAGAAAGGAGGCAATTAAAACTGTGTATCGTGAAGTTGGTGGTGAATGTAAAGATGGATCAACTATTGGTATTGACATGAATTCCCATAACACATCAGTTAAGGAGGTACAATAACTTATCACATTCATAACATTCCTCTTCTGTTTTCTTTTCCTAATTCCTACATATCTCTTGATAAACTGATTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACATTCATAAAAAAACAGTGCTTGAGCAAAACAGAGGTTGTGACTACCGACTCCTGCCCAGACCGTGTAATCATCCCAGACCCTACACCTAAGGTTTGTCTTTAGTTTATAAAATTAAGTGTCAAATCTTCAGTTATATTAATGTTTTGTTTTGAAGTACTTCAGTATTTTGAGTATTTAACCTGTCTATAGCAAAATTGGTTTTGCTGTTGTAAGATGCACTGCAGAAAGTTGTCATTTTCTTCTTTTTCGTGTTTCTTAATTGCATAATTGGTCACATTCACCCTTTTCCTTTGTGCATTGATGAATCCAGAGGGTGAATTCTGTCTTCTACGACATTTTGCCGAAACTGATGCCCATCCTGCAAAAGGATAATGTCCAAGATTTTCTCCGCTTCTTCCATAGGAATATGGATGTCATGGGTCGGGACTTAGTCACCCCAGAAACCTTTTTTTACATAATCATGGTGAATTCTGTGCGATGTGCCAAAGTTGTCTTGGAGGGCCAAGCACCTGAGCTGGAGGGGCTCCGTGCCTATCCCAACTGTGTTACCTAATATGGGTTCTTCCCTCTTACCAAGCTGCTGAGATATTTTCTGTTGACATGATCAAGTTGCTCATTCGGCATGGCGCACTTGTAAATTTACGCACAATTGGTGGTAAAGTAATTGAAGGACTACTCCCACTCCATGTTGCAGTTGAGAACACTTGAATGCATAAGTATCTTGATGACAATCTATTTCCTGACGAGTTGAATCCAGACTACAGTAAGGCAGATACCAATGATATCTACAAGCTTATCCATCTTCTGTGCCTACCAGAAATGGTATGTCTCAGGTCCCTCCCTGCATAAATTATATTACTTTTGCAGTGTAACAAGTAGAGAACAGTTGGGCTCTAATATAGCAATACTTCAGACGTGGTATTCATTCACTTCATTGTCACTTTCTGTACCCCCATTCCAAAATGTAAGGTGTTTTAGTTTTTTTCCTAAGTCAAATTTCTCTAACTTTGACCAAATTTATAGAAAAATATATTAACATCGACAATACCAAATAAATGCACTACCAAGACATTTGATGGAACTAATTTGATGCTGTAGATGTCGGTGGTCAAAGTTAGGGAAGATTATTTAGGACAAAACTAGAATATCTTACATTTTGGAATGGGAGAATTTGTATGTGCCCATCTATCGGTACATGTTCTGATATGACAGTACTTGGTGAACCAGTATCTATACATATTCACTTTATCATAGACATGATAATTTCCAAATGTGACTTTGTGTATTCGCCCATTTGTTGGTACATCCTTTTAGTTTTTCACAATTTTAACAAGAAAAAAAACTAGTTAGCAACTCTGTGTGTCAATTTTCTTTTGCTAGTTGTCAGCTTTCCATGGTACTGACCTTTAAGAAGGAATGTGTCATGGGCAGGAGCTACTGCACACATGCACTATTCATCTGAGTCATTATAGTGCTTTCTGCATATTAGTTTCCACTAGTACAATATTAGGGATACAATTAAGTTAGACTATACATCTGACCTTTAGGCTTTTTGAGTGGTTATCTGTTGATCTGGTCTGCTAGGTGCTCCTTATAAATAAGGAGACATTGTCACCCTTTCCTGTTCAGCATTAAAAAATCAATATAGTTTACAATTTATTACATCTCTTATGTACAGTTAATTCTCTCATAATTCTGATGTTTATTTCGTGAAGAGACCATTTCAGAATGTCATAAAGTTGGAAGATAATCAACACTACGTGCTTGCATACAAATGATAAAAGCACTCATTGTTTTTTCTCATTTGTTGGTGGTTTTTGCAGAAGATCTTCATGGATACGACTAGGCTGCTTGCAAAGCACACAAATGATCTGGTTGGTGAGATTTGCAATTACATAAAACATGGGAAACTTCTGCAGACTGCAGTTTTGCTCCTGGCAGCTCAAGAGCATATCCGGGGTAGCAAAAGAAATGGTAATAGTAAGGAAGATGGATTTGGTGATATTATTAAATATATCTCCGAGCACACCAGTTCCATTAAACTGGATGTTGGTATAAAGAATTAGGCACAGCTGAAGGAAAAATATATTTCATCAACATTATGGCTTGTTCAAGCAATTTCCAGGGCTGGTAAAGCTCTTGGTCAATGCATTCAAAGGCATTCAAAGGTACCAGACCTGGTAGATTGCATCTATGTTCCTTGTGCCTTTTCTAATGACATTTATTCTTCTTTTTTTAATATATATTTCCCCCTTTTTTCTACAAATTAACAGTCCCCTCAGGTGCCCCACAAGGAGGTCCTTGAACACGTGTCATCGATTCTCAAGTTTTATAATTTTTGTCCTACTGGAGAAGGCATCAGCATTGAAAGCCTAAACCTGTACATTCTTGCATTCCTTTATATTTTTTCTGATTATAGTTTGTATGCCATAATGCCTTACATGATTGACATGATGTTTAATTATTTCTTCTGCTTGTTTTTGAAGCTCCCGCTACGACTGCCCCTTGCCCAGTGGACTCATACTTGACGAATTTGGTGTGTGTGTATTTGTTTTAGCCCAAAACCATCCTATCGTGATTTCTGCAAATAGTCCCATCTAATTTTTTTTTTGTGGTAAACAGGGACTACTGTAGCTACTCATCTGCATGCTGGAAAGGAAAAGGTAAAGATGTTTCTTACTTCACTGCATGATGTTTCTTTGTTGTGAAGGTATTTTTGGTGTCCCATTTTTGTTTTACTTGCTGCTGTTTTTACTTTGGGTTAGGGCACTGAATCCACTGACTTTGTGCCAAGTGGCCTTGATTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016830