BGIOSGA016848

From RiceWiki
Revision as of 04:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016848| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016848, complete gene.| tag = OS04G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016848

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016848, complete gene.

LocusTag

OS04G0540300

Ensembl Transcript ID

BGIOSGA016848-TA

Ensembl Protein ID

BGIOSGA016848-PA

Length

2005

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25801679..25803683

Sequence Coding Region

25801679..25801739,25801881..25801957,25802232..25802659,25803048..25803316,25803400..25803683

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25801679..25803683 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25801679..25803683 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGTGGACCAGCTGATCCTGTTCGTCTTTGTGTGCTGTTTGTCCTCGAGGTTTGCTGATGCGTATGATCCGGTAGATCCGAATGGGAACATCATAATCAACTGGGATTTTCAGAGCATCGAGAACGTCTACACGGTCATGGTGAGCGTCCACAATCACCAGCTGTACCGCCACATCGAGCAGCCCGGGTGGCGGCTGAGCTGGAGGTGGGCTGGCAACGAGATCATCTGGGGCATGACGGGCGCGGAGGCGACGGAGCAGGGCGACTGCCACCGGATCCGTGGCGCCACCCGGCCGCATTGCTGCGAGAAGCAACCGGTCATCGTGGACCTGCCCCCCGGCACGCCGTACAACAACCAGGTCTCCAGCTGCTGCCGGGGCGGCGTGCTGTCGTCGCTCACGCAGAACAACCGGACGTCCACCGCGGCGTTCCAGATGGTGGTCGGCGGCTTCAGGCGCGCCACGTACCACGACGGCGACAGGGGCCCCGCGCTGCCGTCACGCTTCGGCGTCGGAGTGCCCGGGTACTCCTGCAGCAACGCCACCAAGGTGAACGCGACCAGCGAGGGCGAGAAGCCGGAGCTGCCGGCCGGCGACGGTGAGGCGGTCGCGCCGGTCTTCCGGTGCACCGACCACATGTGCCCAGTCCGGGTGCACTGGCACGTGAAGATCAGCTACCGTGAGTACTGGAGGGTGAAGGTGACGATCACCAACTACAACCAGGTCAAGAACTACAGCGACTGGAACCTGGTGGTGCAGCACCCGAACCTCCGGAGCCTGACGCAGCTGTTCAGCTTCAACTACCAGCCTCTCATCGAGTACGGCACCCTGAACGACACGGGGATGTTCTGGGGGATCCAGTACTACAACGAGATGATGCTGCAGGACGGTAATGTGCAGACGGAGATGATACTGAAGAAGGACAAGAGCGACTTCACCTTCTCCGGTGGATGGGCGTTCCCGAGGAGGGTGTACTTCGACGGCCACGAGTGCGTCATGCCACCGCCGGATCAGTACCCCTTGCTGCCCAACGGAGGCCCGGACTCGCGCGTCTCGGCGGCGCAATTGATCGCCAGCTCGTGCTTGTTGTTGCCATTCATTTTCCTTATCATGTAA</cdnaseq>

Protein Sequence

<aaseq>MDVDQLILFVFVCCLSSRFADAYDPVDPNGNIIINWDFQSIENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCSNATKVNATSEGEKPELPAGDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQDGNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIASSCLLLPFIFLIM</aaseq>

Gene Sequence

<dnaseqindica>1..61#203..279#554..981#1370..1638#1722..2005#ATGGACGTGGACCAGCTGATCCTGTTCGTCTTTGTGTGCTGTTTGTCCTCGAGGTTTGCTGGTGAGCTCTGTGATATTCAAGTCATGTTTGTTTCCCGTGCTGTTTCTTGGACATCGCCGTCGTGTTTGCCCTCCGAGTGTTGTTCTTAGGTTTGATTGATTGAACTACGGTCGGTGATTTGTTTTCTCTATGTTTTGACAGATGCGTATGATCCGGTAGATCCGAATGGGAACATCATAATCAACTGGGATTTTCAGAGCATCGAGAACGTCTACACGGTGCGCATGCCTGCTAGTGAGTTTAGTACTGCCGTTAATTTTTCACTGTTTGGGATCATCCCAGTAGTAGATATGCAGTCGAATAAAAGATTCAGAATTTCAGACGTACCATCGTTGCAACTATCCTTTTTATCTCGATTCTAACTTTTCCCCATTATTTCCTCCGGTGAAACTTATCATTAGTACAGCCGAAATACGATATTCTGACAAAAAAAATTTGACGTTCGCAACCGCCAACACCACGAATCAATCGATATATCCTGTGCTTATGCAGGTCATGGTGAGCGTCCACAATCACCAGCTGTACCGCCACATCGAGCAGCCCGGGTGGCGGCTGAGCTGGAGGTGGGCTGGCAACGAGATCATCTGGGGCATGACGGGCGCGGAGGCGACGGAGCAGGGCGACTGCCACCGGATCCGTGGCGCCACCCGGCCGCATTGCTGCGAGAAGCAACCGGTCATCGTGGACCTGCCCCCCGGCACGCCGTACAACAACCAGGTCTCCAGCTGCTGCCGGGGCGGCGTGCTGTCGTCGCTCACGCAGAACAACCGGACGTCCACCGCGGCGTTCCAGATGGTGGTCGGCGGCTTCAGGCGCGCCACGTACCACGACGGCGACAGGGGCCCCGCGCTGCCGTCACGCTTCGGCGTCGGAGTGCCCGGGTACTCCTGCAGCAACGCCACCAAGGTGAACGCGACCAGGTCACCGATCGGCAGGCACCGGCACGTCCAGTCTCTGCGTAAGGCTTCTCCCCTTTCTTTCTTATCGCGGCGCGTGCGTTGAGCGGGAGTTCTGAGCGATTCTTGCTGCCGCGCGCGCGGGCGCCGTGTGCAGTGACATGGCAGGTCACCTGCACGTACTCGCAGTTCATGGAGGCCGCGTCGCCGACGTGCTGCGTCTCCCTCTCGTCGTTCTACAACAGCACGATCGTGCCGTGTCCGCGTTGCAGCTGCGGCTGCCCACGATCCCCCACGGCGCCGCAATGCATCAGGCAAAACCCCCCGCGCACCCTCGTTTCCCACACCGCTTAAATCCTGTGCTATATATCCCACTCACTCATCTGCATTTTTGGTTGGTTTAATTTTCCAGCGAGGGCGAGAAGCCGGAGCTGCCGGCCGGCGACGGTGAGGCGGTCGCGCCGGTCTTCCGGTGCACCGACCACATGTGCCCAGTCCGGGTGCACTGGCACGTGAAGATCAGCTACCGTGAGTACTGGAGGGTGAAGGTGACGATCACCAACTACAACCAGGTCAAGAACTACAGCGACTGGAACCTGGTGGTGCAGCACCCGAACCTCCGGAGCCTGACGCAGCTGTTCAGCTTCAACTACCAGCCTCTCATCGAGTACGGCACCCTGAGTAGGTATCACTCACTTTAGCATGATCTCCGTTCGAATTGGATGAACAGAGTGAACCACAGAAGTTGTTGTTTGATTTTGCAGACGACACGGGGATGTTCTGGGGGATCCAGTACTACAACGAGATGATGCTGCAGGACGGTAATGTGCAGACGGAGATGATACTGAAGAAGGACAAGAGCGACTTCACCTTCTCCGGTGGATGGGCGTTCCCGAGGAGGGTGTACTTCGACGGCCACGAGTGCGTCATGCCACCGCCGGATCAGTACCCCTTGCTGCCCAACGGAGGCCCGGACTCGCGCGTCTCGGCGGCGCAATTGATCGCCAGCTCGTGCTTGTTGTTGCCATTCATTTTCCTTATCATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016848