BGIOSGA016858

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Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016858| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016858, complete gene.| tag = OS04G05...")
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Gene Name

BGIOSGA016858

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016858, complete gene.

LocusTag

OS04G0542900

Ensembl Transcript ID

BGIOSGA016858-TA

Ensembl Protein ID

BGIOSGA016858-PA

Length

3372

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25973966..25977337

Sequence Coding Region

25973966..25974130,25974241..25974303,25974636..25974710,25974792..25974875,25975495..25975566
,25976241..25976861,25976944..25977015,25977101..25977337

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25973966..25977337 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25973966..25977337 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGGCTCATCAAGGGGCTGATCAACGTGGCGATCGACGCCGTCGAAGGCGCCGGACGAGGTGAGCGGGGCGGCGAGGACGACGCGCCGAGGAGGCACCGCCCCGCGCGGGAGGAGGAGGAGGGCCGCGGCGACGAGCGGTCGCGGTCGACGTGGGCCGAGGTGGTCTCCGATCACAAGGGCGGCGAGGCGGAGGAGCGCCCGGACCATCGGAATTCGAGGCGGGATGGGAGGCAAGAGAGGAGGGAGGATGGGGATTGGGAGAGGGTGGATGGCCGGAAGCAGCATCAGCACAACCAGTATGAGGAAGAGTACAGGAGGGACAGTAGTAGCCGACGCCCACAGCAGCATCAGCAAGCGCCAGCTTACAGGAGGCAGCAACAGGATGGAGGTGAGAGAAATGATGGAGGGTGGCAGACTGTTGGTGAGAAAAAGCATCATGGAAGGCCACAGCAGTCTGAAGCATGGAATGCATACAGAAGGCCACCATCTGAACAACAGTACTGTGAGGATGCTGGTCAGATCCACCATGGCCTAAATGTAGAACCAACCAGGGAGGAGCTCAACAGCTTATCAAGAGCTTGTAGCCGGCTGTGGGAACTCGATATGAACCGCCTAACACCTGGTAAGGACTACAGAATCGAATGTGGCGAAGGGAAGAAGGTATATCAGAAGGGTGATATGGCATCTGAAACTTTGTTCAGCTGGCTAGGCGATGATGTGCTTAGAAAGCCCACCTACTCTCGTTTCTGCGCGCTTCTTGACAATTACAATCCACATCAAGGGTACAAAGAAGTTGTTACTCAGCAGGACAAGCACGAGGAAGTAGCATTTATTGAAGAGATTGCCAGGACAGCGCCAATCAAGTACTTACACCGGTATTTAGTGCTCAAGGGAGTCGCGTCTCAAGACTATGAGGACTTCAAGAGAATGCTGACATCGCTATGGTTCGATTTGTATGGAAGAGGTGGCAGTTCTAGCAGCTCTTCTGCATTTGAGCATGTGTTCGTTGGTGAGATCAAGGGACGACGAGGACAGGGAGAGAATGAGGTCTCAGGATTCCATAATTGGATTCAGTTTTACCTGGAAGAAGCCAATGGGAATGTGGATTACCAAGGTTACATATTCCCAAGGAGGCGTGGGGAATCGCCTGATTCAGAGACACAGCTATTGACTATTCAGTTTGAGTGGCACGGTGTTCTGAAATCGGTATCCAGCACTCTGATTGGTGTCAGCCCTGAGTTTGAGGTTGCACTCTACACGCTCTGCTTCTTTATGGGAGGGGAAGATAACCGCGTTGAGATTGGCCCGTACGGAGTAAACATCAAGTGCTACCGAATGGGAAACAGCAAAATTGGGTCAGCATTTCCAATTGCAGATAACTGA</cdnaseq>

Protein Sequence

<aaseq>MDGLIKGLINVAIDAVEGAGRGERGGEDDAPRRHRPAREEEEGRGDERSRSTWAEVVSDHKGGEAEERPDHRNSRRDGRQERREDGDWERVDGRKQHQHNQYEEEYRRDSSSRRPQQHQQAPAYRRQQQDGGERNDGGWQTVGEKKHHGRPQQSEAWNAYRRPPSEQQYCEDAGQIHHGLNVEPTREELNSLSRACSRLWELDMNRLTPGKDYRIECGEGKKVYQKGDMASETLFSWLGDDVLRKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEVAFIEEIARTAPIKYLHRYLVLKGVASQDYEDFKRMLTSLWFDLYGRGGSSSSSSAFEHVFVGEIKGRRGQGENEVSGFHNWIQFYLEEANGNVDYQGYIFPRRRGESPDSETQLLTIQFEWHGVLKSVSSTLIGVSPEFEVALYTLCFFMGGEDNRVEIGPYGVNIKCYRMGNSKIGSAFPIADN</aaseq>

Gene Sequence

<dnaseqindica>1..165#276..338#671..745#827..910#1530..1601#2276..2896#2979..3050#3136..3372#ATGGACGGGCTCATCAAGGGGCTGATCAACGTGGCGATCGACGCCGTCGAAGGCGCCGGACGAGGTGAGCGGGGCGGCGAGGACGACGCGCCGAGGAGGCACCGCCCCGCGCGGGAGGAGGAGGAGGGCCGCGGCGACGAGCGGTCGCGGTCGACGTGGGCCGAGGTGAGCGCCACCTGTTCGCGCGATTGCGGAAGAAGATAAAGGAAATCGTGAGGGATGTAATTGGTTGGGTTTGTCGGTCTAAGCTTCTTAGTGTTTTGGGGATGTGGCAGGTGGTCTCCGATCACAAGGGCGGCGAGGCGGAGGAGCGCCCGGACCATCGGAATTCGAGGCGGGTGAGTGACGATTGCTGTTTTGTCTGGGAGAACATTAATCCAGACCGGAATTCGGTTTTAGTTAATCTTCTTCTGGTAGTTTGCAGTTAGTGTTATGGTAGTAGGGGCGTAGTTAAGGCCCGTTTGGCACAGCTCTGGCTCCCAAGTCCAACTTATTTGGAGCTGGAGCTGTTCCAAGCGGTCCAAATCCTCTGTTTTTCGGAGCGGAGTTAGCAGAGCTACTCCACAAATTTGTACTACGGGGGTGGAGCTGGGTTTTTCTGCTCCACAGCTCCACTCTACCCCAAAAGACCCATAAGTGCTTAATAATTTAATTCTCTGGTTGAATTTAGGATGGGAGGCAAGAGAGGAGGGAGGATGGGGATTGGGAGAGGGTGGATGGCCGGAAGCAGCATCAGCACAACCAGGTTTTCCATTTTGTGTACACATTTTCTGTAAAAATTGTAAGTGTGCCACTCTGCTTACGTAGCTGGGCTCCACGTCTGTAGTATGAGGAAGAGTACAGGAGGGACAGTAGTAGCCGACGCCCACAGCAGCATCAGCAAGCGCCAGCTTACAGGAGGCAGCAACAGGTTCGATTCAGTTATCTTCTTCCTTTTTCTTTTTGCAATACAGATATGTACATGAATTTGAGCAATTCACATATTATATGTTTGTCGTGTTGTAGCCTTGGTGGTGCTTTGGTGGTTGTGTGTGGCACATTTTGAGTTTGTTCCTTAGTCACAGAATAGTGATATAGAGTGTACAGGTCTAGTAGTATATGCGCGTTATGTAGAATGACTCTTGATTTCTTTGATTTTTCTTGTTTAAGCTTCTTCCTGAAAAATAAAGAGTTGGTCTAATGGTACAGCTCGATTGAAGCTTGTATATCTCAACCTTGGCTCATTAGCTTTCAAAAGGAAAACAAAAGGGGATGGAAGCTTGGAGTGGATACTAAATAGAGCTTGATAATCTCATTTCCGGATGTGTTTTTCCTATGCTCGTTGCGCTTGACTAATGAGTTGATCAAGTTAATAATGTGCTAATATTTACTGCAAAATACATGCTTATAATCTCATAAACGAAGTTACAATTATTTAACAGTTCTTCCTGCTGCTATTTAGTTTTTTTTTTCTAGCATCAGTTTGAAGATGGGACAGGTATTTTGAGTGTATATTGTGGAGGCTTACCTGTTTGGTTTGGGGTACTCAGGATGGAGGTGAGAGAAATGATGGAGGGTGGCAGACTGTTGGTGAGAAAAAGCATCATGGAAGGCCACAGCAGGTTTGCTTTTGGTTTTCTAACAATTAGATACAATAACATCTGCAAATGTTATAACTTACTGAGATTTTTAGGTATCTGTTTTTGAGTCAATTTGAGCCCATGTTTATAGTCAAGGTCAACTGACTACTATAAATACCCCGACACCCCGTATCACTGTTCTTGTTTGGCTGAATAAAGTCAATAAACTTATTACATATTATTTTCTAAAAGATATTTAACGTCTGTCAGTTGATGCTGTCTTTGAACTGGTTAGCATGCAAAAAGGGCCCCTAAGCTATTCCATTTTGTTCAACCAAACCCCTTTTCTTAACTTGTTGATTTGAGCCCCTGAGATATCTACAATGTGTAATCAAGCATTCTATTGCACTCTCTGTTATATGACAAAATGAGCCCCAAGTGTCAGGCACAGTTGACCAATAATCTTTCAGGTTTTGAGCAATACCATTGACCAATACTTTGAAGCTTTATGTATCAGCCCAAGCACTTTGGTTTATTGTACTTTTTGAGAACTTTAGTGTTTGCATCGTTCTACCACTGTCAGAGTCAGTTACCCTTTTATAAATGAACTGATCGTCAGTTTCCATTTCACAATATGAGATCGCCGTATTAATATATTCTGAGCTTCCTTATCCTGTCTGAATTCTGAGCACCTTCATAATTACTATACTATACAGTCTGAAGCATGGAATGCATACAGAAGGCCACCATCTGAACAACAGTACTGTGAGGATGCTGGTCAGATCCACCATGGCCTAAATGTAGAACCAACCAGGGAGGAGCTCAACAGCTTATCAAGAGCTTGTAGCCGGCTGTGGGAACTCGATATGAACCGCCTAACACCTGGTAAGGACTACAGAATCGAATGTGGCGAAGGGAAGAAGGTATATCAGAAGGGTGATATGGCATCTGAAACTTTGTTCAGCTGGCTAGGCGATGATGTGCTTAGAAAGCCCACCTACTCTCGTTTCTGCGCGCTTCTTGACAATTACAATCCACATCAAGGGTACAAAGAAGTTGTTACTCAGCAGGACAAGCACGAGGAAGTAGCATTTATTGAAGAGATTGCCAGGACAGCGCCAATCAAGTACTTACACCGGTATTTAGTGCTCAAGGGAGTCGCGTCTCAAGACTATGAGGACTTCAAGAGAATGCTGACATCGCTATGGTTCGATTTGTATGGAAGAGGTGGCAGTTCTAGCAGCTCTTCTGCATTTGAGCATGTGTTCGTTGGTGAGATCAAGGGACGACGAGGACAGGGAGAGAATGAGGTCTCAGGATTCCATAATTGGATTCAGGCAAGTTCTTGTAATGTTACAACAGTTCTTGTATTCCTTGCATAAAAATTACTCTGATTGGTATTTCGTGAAACAATTGCAGTTTTACCTGGAAGAAGCCAATGGGAATGTGGATTACCAAGGTTACATATTCCCAAGGAGGCGTGGGGAATCGGTAAGTATCTAGTCTTAAAATTGATAGACAAGATGAACTTGATTATGAGTAATGGAGCTAAAATGTGCAATGCTCCTTTTGGCAGCCTGATTCAGAGACACAGCTATTGACTATTCAGTTTGAGTGGCACGGTGTTCTGAAATCGGTATCCAGCACTCTGATTGGTGTCAGCCCTGAGTTTGAGGTTGCACTCTACACGCTCTGCTTCTTTATGGGAGGGGAAGATAACCGCGTTGAGATTGGCCCGTACGGAGTAAACATCAAGTGCTACCGAATGGGAAACAGCAAAATTGGGTCAGCATTTCCAATTGCAGATAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016858

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016858&oldid=65752"