BGIOSGA016869

From RiceWiki
Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016869| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016869, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016869

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016869, complete gene.

LocusTag

OSJNBA0079A21.13

Ensembl Transcript ID

BGIOSGA016869-TA

Ensembl Protein ID

BGIOSGA016869-PA

Length

2838

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26144917..26147754

Sequence Coding Region

26144917..26144967,26145072..26145191,26145281..26145331,26145956..26146061,26146489..26146547
,26146643..26146717,26147180..26147228,26147335..26147411,26147671..26147754

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26144917..26147754 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26144917..26147754 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTGGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTGGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGKRWLPLEANPEVMNQFMRGLGVPAEAGFCDVYGLDDEMLAMVPQPVLAVIWLYPQDRKKESVASPSSTVESKKLSKNVYFTKQTIGNACGTVGIIHAIGNALSRIKLVEGSYFDRFYKQTADMDPAQRASFLEEDEEMEKAHSVAVSAGDTEAKDGVIEHYVCFSCVDDEIFELDGGNSQPISHGPSSPDSLLQDAAKVIKARIAQYPGSLNFNVMALSKQ</aaseq>

Gene Sequence

<dnaseqindica>1..51#156..275#365..415#1040..1145#1573..1631#1727..1801#2264..2312#2419..2495#2755..2838#ATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGGTACTACCTGTCTACCTGTGTCTCACGCCTCCTCTCCCCTCCCCCATCTCGATCTCTCTCCGCCTTTCGCGCTCACGGCGCGTAAATGCTACGTTGTGGCGCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTGGCTTTATCCTCAGGTGATCCCCCGATGCCCGATTGGTGGTGGGATTTTGGATGGCCTAACAGCAACTGATTATTTTTTCCCCTCACTTTTGTTTGTGAGCAGGATCGGAAGAAGGAATCCGTGGCTTCACCCTCCTCCACGGTCGAGAGCAAGGTGAGATGAGTTGCTATTAGTAGTTCATTCATTATAGTGGGCTGCAACCCCAGCAAGTATGNCCATCGCCTTTTCCTCATTCAGAAGCAGAAGCACTCTGCACTCGGTTGTAGTCTGGTTGATGTACTTGTTAAATGAAATTCAGCAAGCATTGTGTTTCTACGAATGCTAAAAGGCGAAATACTGCTCAACATCGAAGGACCTAGTCAACTGTGTTCCCCTAATGCCATTCATTAAGTGCTACAAATAAATTGAATTTTGTGTGCCACAGTGCCAGCCACTCTACTATGGAATTATCATTTGTTTGTTTGTTTTCGCACCTGCAACTTGACATGTTGAATTTGTTCCCCAAAATGCACGGAGCAAACCAAATTCTAAAAAACAAAATTATACATATTGGTAAGCACCTTATCTAATATATTATTCCCTCTCACCCTCTGTATATCTAATGTGATGGATTGTTTATAATTGTCATTTGGAAGATATATAGTTCAACCATTATTTTATATAGATCTTTGGTTTATTGGAGATGTTGAGAGCATGTGAAACTTTGTTAGATAGATGGTTACTCAGTTTATGCCTTGTATAAGTTTTCCTTACTAATCTTATAACTCCACGGTGCAGAAGCTCAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGGTAATTTCAGGAGTTTATATGTTTATTTGCCTAGTGTTCTATATAACATGTCCTCATGCCTTAGAAGTCAGAACAGCTCTGTTATATATACTTAATTGGATGGTACACATTTATAAGATTTAACTGATCAAGGCAATTCTGCGTAACCTTGTAAATCTGTCTGTCTTGCCAAACAACAAATATCAAATTGTCAGGCTATTTACCAGTCCATTCGGTCACCAAAGTAATTTGCATAATCCCTCAAGAACCCCAAACGTCTGCTACTATGCCTATCTTAATGAAAATTTGAATATATCACCAAATATGCTATTGGGCACTATAGCTTCTTCCCATCACGCATAGAATTGTGCTAAGTATGCAAAAAAAAGTTACCGTAACTTTGTGAGTTATTTTGGCTTATAGATAATTTGTACTTTCTTCTTTGCAGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGGTTAATAGTCCATGCATTAAATTAAGTTATTTTTGGTTAGTGGTTAATCTTGACATATCTGTTGTCCTAATATGTTGATTACTTGACATTTTCAGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGTCATTATAGCCACACCTTTCTTCATTTATGCCTTGTTGATTAATAAACTCATTAGAGAACACAGTAATATTATGTTTAATGTTAACAAGCAAATGCTTGTAGTTCTGTATTGCGAGCAGTTTTAGAGTCACCCTGCGCCAGTAACCAGCTTAAAGTGATAACAACCTGTTTTCAAGGAACCGGACAGATTAACTGCATAGCCAGTTTTCTTAACCTGTTTATAGGCCAGTTGACCAGCTCATATAATACAATAACAGTCGGAAAAGCTACCTTTAGCGGTGGATTATACTGATCATGTGTCTTTTGTAGGTGGTTTGTTGACATGTTATGCATTCTTTCAAAATTTTAGTTGGGATGGCTCATGGCTGTTAAGTGTTGTGGAAGATCTACTTCTATGTCCTTGGCCCAGATTTAGTTCTGTTTTTGGGTTCTTTTCTCACACCTCCCTATACTTTGTGCAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGGTAATTATTATATTGACCATCTACTATAATGCCACAGTTGAACACTTAAACTTGGGTAAAAGCCTGCAACAGATAGTGTATTGATCACTCTTCTTCTCTATTTCAGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGTAAAATCTTTGATTTCTGTTGTTTATTTTCATCAGTTATTTCCTTTTCTGTACATGTTTTTGCAAATTTATGTACTATACACATAAGGCTTGATTGTGATGTTCGTGGTTTTGCCAAGTGTTGAAGTCAAATTTACCTTCTCTTAACTAACTGTTCGGCAATATCTTGCTTCAAAACAGAAGCCATCCTGAAGGATCCTTTTGTGGTACAGAACTGCAATGATGTTTATGATTTCTGGTTTTTCTTCTTTGTACGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016869