BGIOSGA016881

From RiceWiki
Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016881| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016881, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016881

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016881, complete gene.

LocusTag

OSIGBA0134H18.3

Ensembl Transcript ID

BGIOSGA016881-TA

Ensembl Protein ID

BGIOSGA016881-PA

Length

3296

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26312298..26315593

Sequence Coding Region

26312298..26312444,26312525..26312690,26312803..26312941,26314437..26314570,26314670..26314812
,26314950..26315148,26315271..26315593

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26312298..26315593 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26312298..26315593 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTGGGCGTGTACCGAGGAGTAACAACACCAAGTACTATGAGGTTCTTGGAGTTCCTAAAACTGCAAGCAAGGATGAGCTAAAGAAGGCATACCGGAAGGCTGCCATAAAAAACCATCCTGACAAGGGAGGGGATCCAGAAAAGTTTAAAGAATTATCACAAGCGTATGAGGTTCTCACTGATCCTGAGAAGAGAGACATATATGACCAATATGGGGAGGATGCTCTTAAGGATGGAATGGGAGGAGGCAGTGACTTCCATAATCCATTTGACATATTTGAGCAGTTTTTCGGGGGTGGTGCCTTTGGGGGGAGTAGCTCAAGAGTACGCAGACAGAGACGTGGTGAAGATGTGGTGCATACTTTGAAGGTGTCTTTAGAAGATGTGTATAATGGATCTATGAAGAAACTATCATTATCACGAAATATTCTGTGCCCAAAGTGCAAAGGAAAAGGGACCAAATCTGAGGCTCCAGCAACATGCTATGGTTGTCATGGTGTAGGAATGAGGAATATAATGCGACAGATAGGACTAGGCATGATTCAACATATGCAGACTGTCTGTCCTGAATGCAGAGGATCAGGTGAGATCATAAGTGACAGGGATAAATGCACAAACTGCAGAGCTAGCAAAGTTATTCAGGAGAAAAAGGTGCTTGAGGTTCATATTGAGAAGGGAATGCAACATGGCCAAAAAATTGTATTCCAAGGTGAAGCTGATGAAGCTCCTGATACAGTGACAGGAGATATAGTATTTATCTTGCAAGTTAAGGTACATCCAAGATTTAAGAGGAAATATGATGACCTGTTCATTGAGCGCACAATCTCTTTAACTGAGGCATTGTGTGGGTTCCAATTCATCCTCACTCATCTGGACAGTAGGCAGCTCCTAATCAAGGCAAATCCAGGCGAAATTATTAAACCTGGTCAACACAAGGCCATAAATGATGAGGGAATGCCACACCATGGCCGGCCTTTCATGAAGGGCCGTCTCTTTGTGGAATTCAATGTTGAGTTCCCTGAATCTGGTGTACTCTCCCGTGACCAATGCCGGGCACTTGAGATGATCCTACCACCTAAACCTGGGCACCAATTATCAGATATGGACCTGGATCAATGTGAGGAAACTACCATGCATGATGTGAACATAGAAGAGGAGATGAGGCGCAAGCAGTATCAAAGGAAGCAGGAAGCGTACGACGAAGATGAGGAGGAGGATGCTCCAAGAGTACAGTGTGCTCAACAGTAA</cdnaseq>

Protein Sequence

<aaseq>MFGRVPRSNNTKYYEVLGVPKTASKDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYEVLTDPEKRDIYDQYGEDALKDGMGGGSDFHNPFDIFEQFFGGGAFGGSSSRVRRQRRGEDVVHTLKVSLEDVYNGSMKKLSLSRNILCPKCKGKGTKSEAPATCYGCHGVGMRNIMRQIGLGMIQHMQTVCPECRGSGEIISDRDKCTNCRASKVIQEKKVLEVHIEKGMQHGQKIVFQGEADEAPDTVTGDIVFILQVKVHPRFKRKYDDLFIERTISLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMKGRLFVEFNVEFPESGVLSRDQCRALEMILPPKPGHQLSDMDLDQCEETTMHDVNIEEEMRRKQYQRKQEAYDEDEEEDAPRVQCAQQ</aaseq>

Gene Sequence

<dnaseqindica>1..147#228..393#506..644#2140..2273#2373..2515#2653..2851#2974..3296#ATGTTTGGGCGTGTACCGAGGAGTAACAACACCAAGTACTATGAGGTTCTTGGAGTTCCTAAAACTGCAAGCAAGGATGAGCTAAAGAAGGCATACCGGAAGGCTGCCATAAAAAACCATCCTGACAAGGGAGGGGATCCAGAAAAGGTGAGGATGTGCCAGTGTGACATGCAATTGTTTGAATTCATAATCTCTATTTTGTTTTTACATTTTTATGTGTTTTACAGTTTAAAGAATTATCACAAGCGTATGAGGTTCTCACTGATCCTGAGAAGAGAGACATATATGACCAATATGGGGAGGATGCTCTTAAGGATGGAATGGGAGGAGGCAGTGACTTCCATAATCCATTTGACATATTTGAGCAGTTTTTCGGGGGTGGTGCCTTTGGGGGTAAGCAACATATGTACCCTGAAATTTTCCAGCACCCTCAACATTTTTTTGTTTGAACTTTTTTTTTAAAAAAAAAAACAGAATTATTCATGCTAACTTTTATGGTTAACAGGGAGTAGCTCAAGAGTACGCAGACAGAGACGTGGTGAAGATGTGGTGCATACTTTGAAGGTGTCTTTAGAAGATGTGTATAATGGATCTATGAAGAAACTATCATTATCACGAAATATTCTGTGCCCAAAGTGCAAAGGGTAAGCCTTTGTATGTTATTGCTGCACTTCAATTTGCTAACTGGAGGAAATGATGTACTCATTATTTGGCAAAATTATTACTTATCATGCTCTTTCACTTTAGCATTATCGTTACATATGATTCCATCTAGTTGAAAATAAGGTGTAAATAGTTATCCCGAAGTGTTCACTGTAATTTCTCTATATTGCTAGTTTAAATCCATCAACTGGTGATTGTATTTGTTTTGTATTTTCGTGCGCACTTATTTCTATTATTTTTGCATGTACTTGAGATGCAGGGAAACCCAGTTAAATGTTTCGGTTACTGGATAATCCCTTAACATTATCCCATTCCATTTATGTTCTGTTTCAACCTATCCATAAAAAAAATCATTAATGAGAGACCTAATGCTAACGGATACATGCTTGTGTCAGCCAACAATGTTAGAAGATATCCTTACATTTATCCACACTGCTTCTATTCTTGAATCTTTTATTGAATTAAAATAAGGTGCAAACGCAATTTTATAGAACCTGAACCATCTCCAAAAGTCCAAAACTAGTTTAATAAGGGTATCTTGCACATTTGGGGAATATGTTGGACTCCATGCTAAAGCCAATGTTTATTATAGTCCTACATATCTATACTCCTCTAAAAGACCCCAATGGTGGTGGTGAGTATTGAATTTGCCACCACCCACCACCACTGCATGTGGGTCCCCCAAATAGTGAGGTAGGTGGACTTTTGCCCCTTCCCCAACCTCAAGCCATCAAACAGAAAAATTTTCTTTTGAAGTGAGGTAAAAATGATGACAAATAATATGACTAGAAGATTTTACAATGAGAATAATTTTATTAATTTTTGAGGCTGTAAAGTGTATGGAGGAGTTCTCTTCATGTTGCAATGCAGGGGCATTCAGATAGTATAATTATAGAATAACATATGTAGTATGTAAATCCTGATTAAGATGGCTGTGAATTGGCCTATATAATGCCAAGCTTGCAATACCGACTACCGAATACCTAGTCTAATTTTGACTGCCTCTGTAAATACGACATCTAATGTGCAATGAAAGCTAACCTCCCATTTTATAAAGAAATAGACAGTGCACCCAATCAAATAGACAGTGCCTATTGAAATGCTTCATCCCAGTAAAGCTTTAAAAATAAGTCCAGCCCAGTTAAAACACATTACACAGATCAAATACATCTATATGGCCGATTTCAACCCAGGTTTATTCACCATTCTGAGGCGTAGCTAGCTCTATCACCATAATTAGTTTAGTTTATCATTCAAAATATATACGAGGCAAAATTCATGTTTTTTTTTGTGGCCCATTTCAATCCAGGTTTATTCACCATTCTGAGGGGCCCTGTAAAATTCCTTCTATAAATATAGAAGAGGCAAAGGTTTTGCCCTTCATTCAAAAAAATAATTAGTTTATCATGTTTTTTTTATCTGTTTTGAGTGTTGACTGTAGTGTTTCACCTTTTCCATCTTACTCTCTGCTTTCAGAAAAGGGACCAAATCTGAGGCTCCAGCAACATGCTATGGTTGTCATGGTGTAGGAATGAGGAATATAATGCGACAGATAGGACTAGGCATGATTCAACATATGCAGACTGTCTGTCCTGAATGCAGAGGATCAGGTATGCAACAGTTGCTCCAATTTTTATGCTATATCTTGCTGCAAAATTGTGATTTCTTAGGAGCCTGCTTTATGTTTGTAATGTTCTATACTTGATCAGGTGAGATCATAAGTGACAGGGATAAATGCACAAACTGCAGAGCTAGCAAAGTTATTCAGGAGAAAAAGGTGCTTGAGGTTCATATTGAGAAGGGAATGCAACATGGCCAAAAAATTGTATTCCAAGGTGAAGCTGATGAAGCTGTAAGTTTATTTTGTCCATTTATACTAGTATACATACTTGCAGCCACATATTCATCCATCCTTGTGCTAATGAATATCTGTGCATGCACTACTTTCTTTATCTAATATTTTGCACTGTGTGTTTCATGCTGTTGCAGCCTGATACAGTGACAGGAGATATAGTATTTATCTTGCAAGTTAAGGTACATCCAAGATTTAAGAGGAAATATGATGACCTGTTCATTGAGCGCACAATCTCTTTAACTGAGGCATTGTGTGGGTTCCAATTCATCCTCACTCATCTGGACAGTAGGCAGCTCCTAATCAAGGCAAATCCAGGCGAAATTATTAAACCTGGTATCTCATCCCCTTAAAATGCTAGCCTTTTTGTTTGCCACTTCGTAATTCTGTTTTTTCTATTCAGATTCTAATCAGTTGCAGACTTTTTTAAAGAATTAACTCAAATATTTTCCAAACAGGTCAACACAAGGCCATAAATGATGAGGGAATGCCACACCATGGCCGGCCTTTCATGAAGGGCCGTCTCTTTGTGGAATTCAATGTTGAGTTCCCTGAATCTGGTGTACTCTCCCGTGACCAATGCCGGGCACTTGAGATGATCCTACCACCTAAACCTGGGCACCAATTATCAGATATGGACCTGGATCAATGTGAGGAAACTACCATGCATGATGTGAACATAGAAGAGGAGATGAGGCGCAAGCAGTATCAAAGGAAGCAGGAAGCGTACGACGAAGATGAGGAGGAGGATGCTCCAAGAGTACAGTGTGCTCAACAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016881

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016881&oldid=65775"