BGIOSGA016887

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Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016887| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016887, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016887

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016887, complete gene.

LocusTag

OSJNBA0010H02.1

Ensembl Transcript ID

BGIOSGA016887-TA

Ensembl Protein ID

BGIOSGA016887-PA

Length

3072

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26399467..26402538

Sequence Coding Region

26399467..26399586,26399772..26399850,26399960..26400118,26400197..26400372,26401676..26401953
,26402029..26402164,26402254..26402365,26402447..26402538

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26399467..26402538 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26399467..26402538 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCTATGAATTCACATCAGCCAAGGTTGGTAGTTCCGTTCACCTTCTCAACATTATACCAAGCTTTGCAGTTTGCACCAGGAAGCTCCATTTCTTGCAGAAATCAGCATGGAATCGTCTGGCAAAATGGTGCCCGTGGTTACTGAGAGATGAGCCGAAGAAGCCTGTCAAGGTTCTTGTCACCGGCGCCGCAGGGCAAATAGGGTATGCCATTGTCGCGATGATCGCGAAGGGCCTCATGCTAGGAGCCGACCAGCCGGTGGTGCTCCACCTGCTGGATCTGCCGGTCGCGGCCAATGCTCTGAACGGCGTCAGGATGGAACTGATCGACGCTGCGCTGCCGCTGCTCAGAGGAGTGGTGGCGACGAGTGACGAGGCTGAGGCGTTCAAGGGCGTCAACGTCGCCATCCTCATCGGTGGATGGCCGAGGAGAGACGGGATGGAGAGGAAAGATTTGATTAGCAAGAACGTGACAATCTACAAATCCCAGGCCTCTGCGCTCCAGCAGCACGCCGCCCCAAACTGCAAGGTCTTGGTCGTGGCCAATCCCGCGAACACCAACGCGCTCGTCCTGAAGGAGTTCGCCCCGGCAATCCCGGCCAAGAACATCACCTGCCTCACCAGGCTCGACCACAACCGCGCCCTCGGCCAGGTCGCCGAGAAGCTGAACGTGCACGTCGGCGACGTCAAGAACGCCATCATATGGGGCAACCACTCCTCCACGCAGTTCCCCGACGCCAGCCACGCCACCGTCTCGACCGACCGCGGCGAGAGGCCCGTCAGGGAGCTCATCGCCGACGAGATATGGCTGAGGGAGGAGTTCGTCACCGACGTGCAGCAGCGAGGCGCGGCGGTGATCAAGGCGCGGAAGCAGTCGAGCTCGCTGTCCGCCGCCAGCGCGGCATGCGACCACATGAGAGACTGGATCCTTGGAACCCCAAAGGGTACGTGGGTGTCCATGGGCGTTTACTCTGACGGCAGCTATGGCGTCCCCGAGGGCGTCTTCTTCTCGTTTCCGGTGACCTGCGAGAAGGGGGAGTGGTCTGTCGTGCAGGGTCTTGAGATTGACGACTTTGCACGCTCCAAGATGGAAACCTCGGCGACCGAGCTCAAGGAAGAGAAGTCCATAGCTTATGAGTTTCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MASYEFTSAKVGSSVHLLNIIPSFAVCTRKLHFLQKSAWNRLAKWCPWLLRDEPKKPVKVLVTGAAGQIGYAIVAMIAKGLMLGADQPVVLHLLDLPVAANALNGVRMELIDAALPLLRGVVATSDEAEAFKGVNVAILIGGWPRRDGMERKDLISKNVTIYKSQASALQQHAAPNCKVLVVANPANTNALVLKEFAPAIPAKNITCLTRLDHNRALGQVAEKLNVHVGDVKNAIIWGNHSSTQFPDASHATVSTDRGERPVRELIADEIWLREEFVTDVQQRGAAVIKARKQSSSLSAASAACDHMRDWILGTPKGTWVSMGVYSDGSYGVPEGVFFSFPVTCEKGEWSVVQGLEIDDFARSKMETSATELKEEKSIAYEFL</aaseq>

Gene Sequence

<dnaseqindica>1..120#306..384#494..652#731..906#2210..2487#2563..2698#2788..2899#2981..3072#ATGGCTTCCTATGAATTCACATCAGCCAAGGTTGGTAGTTCCGTTCACCTTCTCAACATTATACCAAGCTTTGCAGTTTGCACCAGGAAGCTCCATTTCTTGCAGAAATCAGCATGGAATGTGAGCCTTTAGCATCAAGTTCATTAAGGTAAGCCAGTAAGGTATCATGGTGTATGGCCTACTTGGTGCTATTTGTATGAGTTGCTTCAGCTGAACCCATATCAAAGCTAGGCTCCTAAAATTTGTCATCCACATACAAATTTCACAGAGAAAAAACCATGATGTCATCCAATTCCCTCTTCCAGCGTCTGGCAAAATGGTGCCCGTGGTTACTGAGAGATGAGCCGAAGAAGCCTGTCAAGGTTCTTGTCACCGGCGCCGCAGGTAATACAGAACTCGGAAGCTAATCAAACACTTAAGCAGCTAAACCAAAAATACGACCAGAAGTCGAGAAAACAAATTCACTGACGACATTTTGTGCTGTTTTTTGCAGGGCAAATAGGGTATGCCATTGTCGCGATGATCGCGAAGGGCCTCATGCTAGGAGCCGACCAGCCGGTGGTGCTCCACCTGCTGGATCTGCCGGTCGCGGCCAATGCTCTGAACGGCGTCAGGATGGAACTGATCGACGCTGCGCTGCCGCTGCTCAGAGGTGCGTGACCTTGTACCTTCAAGTTTCCCTCGTTGCGCTGGTCGCCCGAGTATAAAATATGATGCTTCAATTGTGTAGGAGTGGTGGCGACGAGTGACGAGGCTGAGGCGTTCAAGGGCGTCAACGTCGCCATCCTCATCGGTGGATGGCCGAGGAGAGACGGGATGGAGAGGAAAGATTTGATTAGCAAGAACGTGACAATCTACAAATCCCAGGCCTCTGCGCTCCAGCAGCACGCCGCCCCAAACTGCAAGGTGAATGACGACGCATCACGTATACGCAAGTACACAATTTCTATGCTAAAACACTACTGCTACTACGGAACAGTAAAAAAGAAACGGGCTAGAACCGATATTTATAGTGATTTTGCCGTTCAAGTGTGCACCCACGAGGTACTGTTTGAGACGATTAGCACCTATATTCATACATAATGCCGGTTGGTAATAGAAAACGACACCTATAAACTATCAACATGTTTACATGTTTACCGTCCACCAAGTTATACTGCCCGGTACTAGAATTGATCGGTACCAAAACTCATCCGACCGTTCAATCCCGGATGGGTAGGATCGGGAGAGAAAATAAGCAGGGATGCGCTCAATCAGGGCGGCAGAGTTAAAGTCGTCGTTCCCAGCGCTGGTGGGCGGAGAAGGAGGATTTCTTCCCTGCGCCGAGGGGCCGAGAAGGAGTCCTTCCCAGCGCCGACGGGCGGAGAAGGAGGATTCTTTCCCGGCGCCGAGGGGGCGAGGAGGAGGAGTCCTTCCCAGCACCGAGGGGCCGAGCTAGGATGAGAACTTCCCGGCGGTGAGGGGCGGACGAAGCGGAGTTCTTCACGGCGCAGCGGGGATGAGGTTGACACACTCTTGGCGGCAGTGGTGTTGGTGGGAACCATATCACCCTATCTGCCCGACTCACATCCATCTATTGCACATAATTATATTTTTGCCCTTCCACCTTAGTTCTTAGGTCGGTACCTGTACCAGGGACAGAATTGGTATCAAACTCTACCGACCGTTGGATCGGGCCAGATCCAACGACTAGGAATTTGGTACCGCCCGGTACAAGTACCGGCCATTGGACGGTAAAAAACAAATAAACTATACTTCACGCAAATTATAGGTGCCGGTTATTTCACCCAACTAGCATCTTGGTGTGGGTCCACTGGTTATCACGACGAAGTAATTGTTGATGGCCCTCACTTAAAAACAGGCACCTATATGTTGATATAGGTTTCAATTGTGTAATCGATACTGATGACTATTATTATCGGTGCTACCTAACGGATGCTAGTTAAAACTTTTGATATTTATGTTGGGTTCCTAACTAGTACTCCATCCATTTCACAATATAAGTCATTTTAGCATTTTTCACATTCATATTGATGTTAATGAATCTAGATATATGCATCAATATGAATGTAGAAAATGATGTCTAAATTTATTAATATCAATATAAATGTGAAAAATGTTAGAATGACTTACATTATGAAACGTATGAAGTAACTATTAGGATTTCTATTATAAAGTCAAACCAGCATGATCTTGCCGGAGTTTGCAGGTCTTGGTCGTGGCCAATCCCGCGAACACCAACGCGCTCGTCCTGAAGGAGTTCGCCCCGGCAATCCCGGCCAAGAACATCACCTGCCTCACCAGGCTCGACCACAACCGCGCCCTCGGCCAGGTCGCCGAGAAGCTGAACGTGCACGTCGGCGACGTCAAGAACGCCATCATATGGGGCAACCACTCCTCCACGCAGTTCCCCGACGCCAGCCACGCCACCGTCTCGACCGACCGCGGCGAGAGGCCCGTCAGGGAGCTCATCGCCGACGAGATATGGTACGGAACTCGTCAAGTAAAAATGCATGTGTGGTAACGAGTTCTGATAGTGGCTCCACCACCATGTGTCGACAGGCTGAGGGAGGAGTTCGTCACCGACGTGCAGCAGCGAGGCGCGGCGGTGATCAAGGCGCGGAAGCAGTCGAGCTCGCTGTCCGCCGCCAGCGCGGCATGCGACCACATGAGAGACTGGATCCTTGGAACCCCAAAGGTCCATATCCCCTCCCCTGCATACCTTCCTCCGAATTCCGATCGATCACATCTAATAATTCCAGCATTTGCTCGTCCTCTCCTCATCAGGGTACGTGGGTGTCCATGGGCGTTTACTCTGACGGCAGCTATGGCGTCCCCGAGGGCGTCTTCTTCTCGTTTCCGGTGACCTGCGAGAAGGGGGAGTGGTCTGTCGTGCAGGGTGAGCTCATGGAATCCTTGTGATTCAGATACATTGCAGGATGAGATCAGCCTAAGAATGTTCGCTTTGTTCGCACTCCAGGTCTTGAGATTGACGACTTTGCACGCTCCAAGATGGAAACCTCGGCGACCGAGCTCAAGGAAGAGAAGTCCATAGCTTATGAGTTTCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016887