BGIOSGA016905

From RiceWiki
Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016905| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016905, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016905

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016905, complete gene.

LocusTag

OSJNBB0012E24.15

Ensembl Transcript ID

BGIOSGA016905-TA

Ensembl Protein ID

BGIOSGA016905-PA

Length

2035

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26691286..26693320

Sequence Coding Region

26691286..26691428,26692169..26692172,26692214..26693320

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26691286..26693320 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26691286..26693320 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATTGGCCACCACCACCCAAGGGGAGCGCAAGCGCAGAGGACAAGAGCGCCTCCTCGTCTGGTCTGCTTCGGCCCCCCGCTCGCTCCTCCTGCCGAAGCACTCACTCTTCGGCTGCTCATCCTCCTCCTCCTCCTCAGACAGGAGCAGAACCAGACTTGCCACGAAGGATTTGATAATCTAGGGGTTCGGGACGAGATGATATTTTCAGTCAGCTTATTTGGTAGTTCCCACCAGTCCATTCACAAACTTTACAGGAAATGCTGGTCAAGTAACTCACATTCTACACTGAATGTGCTTTCACTTGCAAAAACTGTGGGTCAAAGTATGAGAATGAAGAGGATACGTGTCAAGCCTCATGCCACTGACCTGAAGAATCGCCCCCAGGCCCATGAGGATAATGTGTTCTACAAATTGGTTTATAGGCTCCCTGAAAACCTCAGCTGGCTGTTGGCGTCACCAGAAATGGCTAGAAGACCACCCTCAAAGAAGAAACTAAAGAAGGAAGAAATGGTAAGTAGTAATCAATTTGGTGTGATCTTGGAGTGGGAAGGAGTTGTTGTGGAAGATGATGATCCAGATTTGGAGCCTCGAGTTTGGTACGTGTTATCACTTGAAGAGGCAAAGTCTTTTCCTCCAGATGCAGTGCTGAAGGAAATTGAGGGGATGAGGACTGATCAGGCTATTTTAGAAGTCTTACATTGGTCAGAAGATCCACAAGAAGTACAAAGGCTGGCAGCACGCAAGGAGGTAATATATAAAACATTACGTGGTAGATTCTACCAACTGCGACCAGGTGTTCTTGATTTCCTGAACACCCTTGTGGATTTTGACATTCCAATAGCAATCACAACTCCTCGCCCACGGTTGAGCCTAGAAGAAGGGATAAAAGCTGTTGGTCTTCAAGGCTACTTTGATGCTATAGTGGCAGCAGAGGATTTCTGCCGAGGGAAACCCGAGGGGGAGATGTTTGAGGTCGCAGCAGGGCAACTTGGTCTTGAGCCTGATGTTTGTCTTGTGCTGGGTAACTCAAATTCGACAATAAAATCTGCGCATACTGCTGGGATGAGGTGTGTTGCGGTTGCAAGCCGATACCCTGCCTATGAGCTCCAAGCAGCAAACCATGTTGTAAGATGGCTTGATCAGCTATCTGTCGCTGACCTGCAAAGGATTGCCAATGGCGAGATTCTTGGGCTCAGGGGCAGAAGATCTGACATGGACATGGACATGGAGATTGTGATCGAGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAIGHHHPRGAQAQRTRAPPRLVCFGPPLAPPAEALTLRLLILLLLLRQEQNQTCHEGFDNLGVRDEMIFSVSLFGSSHQSIHKLYRKCWSSNSHSTLNVLSLAKTVGQSMRMKRIRVKPHATDLKNRPQAHEDNVFYKLVYRLPENLSWLLASPEMARRPPSKKKLKKEEMVSSNQFGVILEWEGVVVEDDDPDLEPRVWYVLSLEEAKSFPPDAVLKEIEGMRTDQAILEVLHWSEDPQEVQRLAARKEVIYKTLRGRFYQLRPGVLDFLNTLVDFDIPIAITTPRPRLSLEEGIKAVGLQGYFDAIVAAEDFCRGKPEGEMFEVAAGQLGLEPDVCLVLGNSNSTIKSAHTAGMRCVAVASRYPAYELQAANHVVRWLDQLSVADLQRIANGEILGLRGRRSDMDMDMEIVIEE</aaseq>

Gene Sequence

<dnaseqindica>1..143#884..887#929..2035#ATGGCCATTGGCCACCACCACCCAAGGGGAGCGCAAGCGCAGAGGACAAGAGCGCCTCCTCGTCTGGTCTGCTTCGGCCCCCCGCTCGCTCCTCCTGCCGAAGCACTCACTCTTCGGCTGCTCATCCTCCTCCTCCTCCTCAGGTCAGCAAGATTCATCCGGTTTCACTTGGATTGTCTGGGATTTGGTAGTTGAAGCATTTGGCTATTCTTGTTTTGCGCATGCTCCTAGTTCGTCTGCGTGGGAGAAAATACTGAAAAGGGGGTAGTTCGTGTGTGTGTGTGAGCATGCCCCATTGTTTGGCATTTTGTTGGAGCTGTATATATGTGTCATTGGCTAGAACTTTGCAATGTCACTACCTGCTTAAGCTCAGCAATTGTGCTTCAGTTCGTGCAACCTTTTGTACTAAGCTGAACTTTTATTTTTTCCTCTCCTGGTACCTACAATAACCTTGTCTCAGATGCAAAAGGATCTCTTTAGTAAAAGGCACTTTACTTCATGTAGTATTATTGCTGTCAGATGCTGGCAAACATTATTGGGGCTCGGCATTCTTTTCTTTCTCGAACTCAAATTAGCAGTTTGGAAGAGTGCGTCCTAGAGGTAGCAATCGTATACCGCAATAGTGTGAAGTAAGTTGCAAATCAAATGCATATGGCAATCTAGTATATTGACAACTTTTGCCGCTATGCAAGTTTTTTGGGAGAACTTAAGCTCCCCAAATATAAGTTGCACATTTTGCGGAACTTGCATTGTCCAGGAGAACCCCCAACCTCCCACAAAAACTTTGAGTGACTTAACTTAAGATTGATGATTTATAGGGCCTTCTGTTCCCTCTAATATAGTTGCGCATTTTTGTACTTGTACTGATTTCTTTGTTTTTAAGACAGGTCAAGTTTGATTCTTCTCTTGTTCTCTTTGTTCTTTATAGGAGCAGAACCAGACTTGCCACGAAGGATTTGATAATCTAGGGGTTCGGGACGAGATGATATTTTCAGTCAGCTTATTTGGTAGTTCCCACCAGTCCATTCACAAACTTTACAGGAAATGCTGGTCAAGTAACTCACATTCTACACTGAATGTGCTTTCACTTGCAAAAACTGTGGGTCAAAGTATGAGAATGAAGAGGATACGTGTCAAGCCTCATGCCACTGACCTGAAGAATCGCCCCCAGGCCCATGAGGATAATGTGTTCTACAAATTGGTTTATAGGCTCCCTGAAAACCTCAGCTGGCTGTTGGCGTCACCAGAAATGGCTAGAAGACCACCCTCAAAGAAGAAACTAAAGAAGGAAGAAATGGTAAGTAGTAATCAATTTGGTGTGATCTTGGAGTGGGAAGGAGTTGTTGTGGAAGATGATGATCCAGATTTGGAGCCTCGAGTTTGGTACGTGTTATCACTTGAAGAGGCAAAGTCTTTTCCTCCAGATGCAGTGCTGAAGGAAATTGAGGGGATGAGGACTGATCAGGCTATTTTAGAAGTCTTACATTGGTCAGAAGATCCACAAGAAGTACAAAGGCTGGCAGCACGCAAGGAGGTAATATATAAAACATTACGTGGTAGATTCTACCAACTGCGACCAGGTGTTCTTGATTTCCTGAACACCCTTGTGGATTTTGACATTCCAATAGCAATCACAACTCCTCGCCCACGGTTGAGCCTAGAAGAAGGGATAAAAGCTGTTGGTCTTCAAGGCTACTTTGATGCTATAGTGGCAGCAGAGGATTTCTGCCGAGGGAAACCCGAGGGGGAGATGTTTGAGGTCGCAGCAGGGCAACTTGGTCTTGAGCCTGATGTTTGTCTTGTGCTGGGTAACTCAAATTCGACAATAAAATCTGCGCATACTGCTGGGATGAGGTGTGTTGCGGTTGCAAGCCGATACCCTGCCTATGAGCTCCAAGCAGCAAACCATGTTGTAAGATGGCTTGATCAGCTATCTGTCGCTGACCTGCAAAGGATTGCCAATGGCGAGATTCTTGGGCTCAGGGGCAGAAGATCTGACATGGACATGGACATGGAGATTGTGATCGAGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016905