Os09g0408600

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0408600| Description = Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)| Version = NM_001069677.1 GI:115479096 GeneID:4347022| ...")
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Gene Name

Os09g0408600

Description

Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)

Version

NM_001069677.1 GI:115479096 GeneID:4347022

Length

2691 bp

Definition

Oryza sativa Japonica Group Os09g0408600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15108476..15111166

Sequence Coding Region

15108655..15108759,15109315..15109398,15109506..15109576,15109655..15109742,15109849..15110040
,15110134..15111099

Expression

GEO Profiles:Os09g0408600

Genome Context

<gbrowseImage1> name=NC_008402:15108476..15111166 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15108476..15111166 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcctcccccctctggtggtcggctcgaccatggcgtcgctggcgtccctctcgctcccggtctccaccgcctcgcagggccgcgcgcgcggcgcgggacccgtcacggcggcgccgcggcggcggagggtgagcgtcgtgcgggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggatcgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggtggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgtcctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtccgaggaggaggtcgccgtcgcgcaggcgcgtgcacaggctctcccgagaggcccgggccaagaaccccctcctccccacgttcccaaggctgcgccgccgccgccgccgccaccaccaccacatgcccctcctggaccgccgccgacgaagggcgtcgccacgccgcacgccaagaagctagcgaagcagcacagggtggacatctccatggtcgtcggcaccgggccacacggccgcgtcaccggagccgacgtcgaggcggccgctggcatcaagccaaagctaaagggcccaaagggcgctccacctccgcctccgcctccacctccatcgccacacagacaccccgctgctcaccctccgcctccgcctcaccaccccgctcctcgccctccgccgccgatggcggcggcaccccggcaaccagcagcgctgccaccggtgcctggcgcgacggtggtgccgttcacgacgatgcaagccgcggtgagcaggaacatgatggagagcctgtcagtgccaacattcagagtcggctacgccgtgtgcactgacaagctcgacgcactatgcgagaaggttaaatcgaaaggggtcacaaagacattgttgctggtgaaggccgcggccatggcgctcacgcagcacccggttgtgaatgccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggctgtcgcgatcgagggcggccttcttacgcctgtcttggaggatgttgataagttggatgtataccttcttgcacaaaagtggagaggcctgctcaagaaggcacgcatgaagcagctccaaccagacgaatacagttcagggacttttacgctgtctaatttgggtatgtttggtgtggatagattcgatgcaatccttccacctggtcagggggctattatggctgttggaggatcgagacctactttggtggccaacaaagatggtttctttagcatcaagaacgaaatgctggtcaatgttactgctgaccacaggattatatatggtgctgatttggcagcattcctgcagacatttgcgaagatcattgaggatcctgagagcctaacattgtag</cdnaseq>

Protein Sequence

<aaseq>MLLPPLVVGSTMASLASLSLPVSTASQGRARGAGPVTAAPRRRR VSVVRAKVREIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFY DGIVAVVLVPAGESAPVGAPIALLAESEEEVAVAQARAQALPRGPGQEPPPPHVPKAA PPPPPPPPPHAPPGPPPTKGVATPHAKKLAKQHRVDISMVVGTGPHGRVTGADVEAAA GIKPKLKGPKGAPPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPMAAAPRQPAALPP VPGATVVPFTTMQAAVSRNMMESLSVPTFRVGYAVCTDKLDALCEKVKSKGVTKTLLL VKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLL AQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGGSRP TLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL</aaseq>

Gene Sequence

<dnaseqindica>2408..2512#1769..1852#1591..1661#1425..1512#1127..1318#68..1033#ctccgctcgcgccgccgccgacgaggtcgccggactccgccgccgccgccgcaccaccgcccgcgacatgctcctcccccctctggtggtcggctcgaccatggcgtcgctggcgtccctctcgctcccggtctccaccgcctcgcagggccgcgcgcgcggcgcgggacccgtcacggcggcgccgcggcggcggagggtgagcgtcgtgcgggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggatcgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggtggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgtcctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtccgaggaggaggtcgccgtcgcgcaggcgcgtgcacaggctctcccgagaggcccgggccaagaaccccctcctccccacgttcccaaggctgcgccgccgccgccgccgccaccaccaccacatgcccctcctggaccgccgccgacgaagggcgtcgccacgccgcacgccaagaagctagcgaagcagcacagggtggacatctccatggtcgtcggcaccgggccacacggccgcgtcaccggagccgacgtcgaggcggccgctggcatcaagccaaagctaaagggcccaaagggcgctccacctccgcctccgcctccacctccatcgccacacagacaccccgctgctcaccctccgcctccgcctcaccaccccgctcctcgccctccgccgccgatggcggcggcaccccggcaaccagcagcgctgccaccggtgcctggcgcgacggtggtgccgttcacgacgatgcaagccgcggtgagcaggaacatgatggagagcctgtcagtgccaacattcagagtcggctacgccgtgtgcactgacaagctcgacgcactatgcgagaaggtgtcatttctatgaatcccctgcaaaattggtgaaattcatagctgctagagttacagtttagttatagtttgactgaaatgaattgagtaggttaaatcgaaaggggtcacaaagacattgttgctggtgaaggccgcggccatggcgctcacgcagcacccggttgtgaatgccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggctgtcgcgatcgagggcggccttcttacgcctgtcttggaggatgttgataaggtacatgcttattgcggtagctgcgttctgttaagaaatgtagcattgttgcgaattagcgtctagtgaatgatctaacattttctgaaaaaaactaacattgcagttggatgtataccttcttgcacaaaagtggagaggcctgctcaagaaggcacgcatgaagcagctccaaccagacgaatacagttcaggtacagaatatgttgtattgtgattggcacttggttttttatggaaaccacgcttacctgaagtttgatgatttgtagggacttttacgctgtctaatttgggtatgtttggtgtggatagattcgatgcaatccttccacctggtcaggtaggttttttcattgactgcccagtcagtatgaaattttgacagaattgtatttgagcaatatgagaactaagaacaactgtttgtcgatggctcgctcaatgcagggggctattatggctgttggaggatcgagacctactttggtggccaacaaagatggtttctttagcatcaagaacgaaatgctggttagtttgtttttcacactttacggcctgtatgcctcaaagctctgctcatgctcagtgactgaccattgatagtaatttggcatatgcaattatgcattcaactctaaaaatcaatgagtaagatttccttgcaaatatggaactaagtatattttgtcatcttgtaattggatcggcaagtggaataatttatatgcacctgattgaacgtaataagtgcatagtgtagacctgttattttcagcttcatgcttgtgtcattattgttaaaacctagaggtgccaactggatgtttggcttctctgagttggttcctgtaatgagttcataccagtctgttgttctttcagtcaatcactgacttagtttagtttaaaaaaagttttttgtgacttatatctatacttattatctatcgattctgtgtggacagttcccagcagcgtgtcacagcacatcttacctttcaacatttcactggttgcaataaatttttctttcagagatacttctctgaagcttctgaactatgtttctcccaaccttttcaggtcaatgttactgctgaccacaggattatatatggtgctgatttggcagcattcctgcagacatttgcgaagatcattgaggatcctgagagcctaacattgtagggaaaatgtccctcacaagtgctccctaagtatctgcagtttgtttgattcgaattggaagaataattccaccgagcatttgtagccattaattgtaaatagttttgttattgttttaatgttattgccatatgatcaatattttttcttatacccgccacggaataagtgaaatgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0408600, RefSeq:Os09g0408600