BGIOSGA016909

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Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016909| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016909, complete gene.| tag = B0103C0...")
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Gene Name

BGIOSGA016909

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016909, complete gene.

LocusTag

B0103C08-B0602B01.3

Ensembl Transcript ID

BGIOSGA016909-TA

Ensembl Protein ID

BGIOSGA016909-PA

Length

6015

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26791035..26797049

Sequence Coding Region

26791035..26791050,26791126..26791218,26791917..26791984,26792450..26792531,26792667..26792713
,26792823..26792948,26793325..26793402,26793912..26793999,26794395..26794507
,26795449..26795511,26795583..26795638,26795979..26796071,26796335..26796391
,26796468..26796569,26796655..26796703,26796795..26796863,26796963..26797049

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26791035..26797049 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26791035..26797049 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCGGGAAGAAGTGACTGAGTTCCTCGGCCAGGTGCCCCTCCTGCAGTGCCTCCCCAGCTCCTCCATCCGCAGGATCGCCGACGCCGTCCTGGTGAAGCGCTACGAACCTGGTGGTTACGTTGCTCGTGAAGGTGACCCTGTAGATGGCCTTTACATCATATTGGATGGGCAGGCTGAGGTTTCAGCTCCTGCAAACACCGAAGAAGAAAACCGCCCTGACTATGTGTTAAATAAGTATGACTACTTTGGTTATGGAACCAATAGTTCTGTGCATCAAGTAAATGTTATTGCAGTATCAAAGCTGACCTGCTTCGTATTGCCAAATCAATATGGACACTTGTTGCAACCAAAGACCATTTGGAGTGCAGAAGAGACACCTGAGAACCATTCTTTGCTAGAACAAATTTTGCACTTAGAGCCATTGGAGGTCGATATCTTCCGTGGGTTTACTTTGCCAGGAGCTCCGACTTTTAGGCAAGTTTTTGGAGGACAGTTGATAGGACAGGCACTAGCAGCAGCATCCAAGACCGTTGACTGCCTAAAAGCGGTGCACAGTTTGCACGCAATTTTCCTTATCGCAGGAGACAAGAATTTGCCAATAATATATCAGGTTCATCGGGCGCGCGATGGAACAAGCTTTGCCACCAGAAAAGTGGAGGCAAAGCAAAAGGGCCTTGTCATTTTCACCTTGATTGCTTCATTCCAGAAAGACGAATTAGGGTTTGAGCATCAAGCTGCAATCATGCCTGATGTTCCTCCTCCAGAAGAGCTCCTGAATCTGGAAGAGATACGGGAAAGAAGACTTACTGATCCTCGCTTCCCAATGCAATATAGGAACTCAGCTGCCAAGAAAAAGTTCGTACCTTGGCCCATAGAAATGAGGTTTTGTGAAGATTCAGCATCTCAACATAAACCAAGCTTAAATTATTGGTTTAGAGCCAGAGGAAAACTTTCTGATGATCCAGCACTGCATAGGTGTGTTGTAGCATATGCTTCGGATCTACTATATTCTGGTGTCAGCCTAAATCCTCATAGGGAGAAGGGTCTGAAGACATACTCACTCAGTCTTGATCACTCGATTTGGTTCCACAAGCCTGTGAAAGCTGATGATTGGCTTTTATATGTGATCGACAGCCCATCTGCACACGGTGGGCGGGGTTTTGTTACAGGGCGAATGTTCAACCGACAAGGAGAGCTCGTCATGTCGTTGACCCAAGAGGCGCTGATTAGGAGGGCGAAGACGCCAGGACAACCGTCACAAACCCCAAGGCCAAAGCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MDREEVTEFLGQVPLLQCLPSSSIRRIADAVLVKRYEPGGYVAREGDPVDGLYIILDGQAEVSAPANTEEENRPDYVLNKYDYFGYGTNSSVHQVNVIAVSKLTCFVLPNQYGHLLQPKTIWSAEETPENHSLLEQILHLEPLEVDIFRGFTLPGAPTFRQVFGGQLIGQALAAASKTVDCLKAVHSLHAIFLIAGDKNLPIIYQVHRARDGTSFATRKVEAKQKGLVIFTLIASFQKDELGFEHQAAIMPDVPPPEELLNLEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFCEDSASQHKPSLNYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHREKGLKTYSLSLDHSIWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELVMSLTQEALIRRAKTPGQPSQTPRPKL</aaseq>

Gene Sequence

<dnaseqindica>1..16#92..184#883..950#1416..1497#1633..1679#1789..1914#2291..2368#2878..2965#3361..3473#4415..4477#4549..4604#4945..5037#5301..5357#5434..5535#5621..5669#5761..5829#5929..6015#ATGGATCGGGAAGAAGGTAAAGCAGCGCAGAGCCCGCCGAATTTAGGAGCGCTCCTGGCTAATCCGAGGGGTGGTTGCCATTGTTGTGCAGTGACTGAGTTCCTCGGCCAGGTGCCCCTCCTGCAGTGCCTCCCCAGCTCCTCCATCCGCAGGATCGCCGACGCCGTCCTGGTGAAGCGCTACGGTGAGTAGCACACGGTCCCCATCACTGTATCACTCGCTCTAGTTTTTGCGACCTTCGATTGGTTGGTGGTTATGGTGAACGTGGCGGCGGCGGATTCCTGATGCTCGTTGGTGGGAGATTTTTTTTTAGATTAGTAAATTAGCGGTATTCTCCAATTGCGTACCCGATTTTTGTGGAGCTCGCTGGCTATGTTTGATTTGCTGCTGTGTATGTATATGTATAGGTTTAATCAACTTGCTTAAAAAGGTGACTATTAGAGGCTTAGAGCATCACCCCCTATAATAGGGTGCTTCCATTCAACGCCCAAGCTAGCTACTATAACATTCATTTTTTTTAGAACAATAACAATGTTATAGATTTTCTTTATAGATCATGGGGAACTGGGGATATCATTGGCAATAGTACACATTGATTTGACATGTAATGCTTGAGAGAAAATTGGTATCAGTTCAATAACGAAGATCAGGCATCCAAATCCTTGCAAGCGAGGACTCAAGCCTGGGTGTTCACCTACGCCTGCCACCTACCTCACTTCCTCTCACTGATTTAGTGATGTTTAGTTCTCAACGCATGTTTGGCATTATCCCCTTTCTAGAGAAGTGTTGTTTCTTTTTTTGGTACTGAAAGTGAATGTGGTTTCAAGTTGGAATCAAGCTGATTACATGTCTGTTCGTTGTGATACTTTTCGAATTTTGCAGAACCTGGTGGTTACGTTGCTCGTGAAGGTGACCCTGTAGATGGCCTTTACATCATATTGGATGGGCAGGTATGAATTGGAGTATATTATTTCTTTGCTTAGCATTTATTGGCTTTTATGATTACCATACTTTGGGAACAAATATGCAAGCTGTCATTTAGCCAGTTGTCAGCCGGATTCGTTGACTAGTACTGTTTGTGGCTGTTCCAACTACCACGCTGGAACAATTGATGAATTGTTCTTTAAAAAAATATTCGGTCATATTTTGCAGCAATGGTCATTTATGCTGGGACTTGGGGTGAAGGATCAGTTTGTACTTTGTAGTTTCACACTTTCAGAGTATCATTGTTGTCCTGATAGCCAGTTCCTTTGCTCCTGCCACAACTGAATGATATAATCCAACTGTTCTACTCTCATGTTTTTTTTTGTTATTATCATAGTTTATATGATCAGTTACATTATCCTTGTGATCTACTGATGAAGCAGAGGCCATGGAATTCTCAGTATTAATTATCCATCTGCATTATATTGCAGGCTGAGGTTTCAGCTCCTGCAAACACCGAAGAAGAAAACCGCCCTGACTATGTGTTAAATAAGTATGACTACTTTGGTTATGGTAAGAACTATCATTACATGACTTCTGATTTTTATAGTAGTTCCTTTTTTTTTATCAAGTATATAAACCATTTTTTATAAGATACGGAAGCAGCTCTGTTTGCGTACTATTCTAATATTCTGCATTGTTTTGTAGGAACCAATAGTTCTGTGCATCAAGTAAATGTTATTGCAGTATCAAAGGTTCCTTGTTCATGTTTCTATTTTTAATAACAGTATAAGCTGATGGTGTCCCTACTGTAATGATAAATATCTTCTGGCTTCAGCTTATTGTTAGTATCCTATTTTGCAGCTGACCTGCTTCGTATTGCCAAATCAATATGGACACTTGTTGCAACCAAAGACCATTTGGAGTGCAGAAGAGACACCTGAGAACCATTCTTTGCTAGAACAAATTTTGCACTTAGAGCCATTGGAGGTAAGTCTAAATGTGTTGTGATGTTTCTGTTTTGTAAAGGTATATATCACTTTACAGTATGATTACTGTGCTGAAAAATTATCAGGTATCCTAGTTCGTAAGATCTTATGACTTATATACTGCATACGCTAATTTTGTAGCTCTACCATTCTTTTTACCACCAACAGCGTGTTAAGTATCACCCATTAGAGGTTAACCTGATTTAGATTATTAATAGATCAGGCTTTCATTTACATCATCTAAAAGAGACAATTTAAGGTGGATTTGCAGTTTCATATTTACACCTCCTATTTATAAGTGGAAAGGGCAAAATATTGTCACAGCAAGTCAAATTTAAGTCTGTAAACTTTCTCACTGTAATCATTATCTTTTTTAGGTCGATATCTTCCGTGGGTTTACTTTGCCAGGAGCTCCGACTTTTAGGCAAGTTTTTGGAGGACAGTTGATAGGACAGGCATGTTCCAACTAAAATATCTTACTTTCTATTATCAATATCTGCTGGATGTTTGTATTTCACCACTTCCTTTTTCTGTTATGTTGCAACATTCATATTTAAGTAGAAGTGCATGAATCCATTTGTGAAAAATAAAAGATAAAAAAGGGAGCTTCTTTAACATGCTTCTGAATCATTTTTTTTGCTGCTTTTTGGAAAACTTTTGGACTTTCCTCGTTGATCACAGAGGGCCAGTTTTTGTAATAGCATGGATGTAAGTGCCAAAGGAGGAAAAAACATTGTAAAGGCGGTTCACATAGGACAGCATTATTTTGCTCAAACATGTTTTCTTCAATGGTATATTAATCTTCTGATTAAATTGTTAAATTGTTTGTCCATGAAAATTGTTTTTCCATTACTCATTCTCATGCACTCCCAAAAGAAAGTTCAAACACTAGAAAGAGTACACACATCCATGTCAAAGATTTTCACTATGTCTGAACTTTGTTTGTTATTGGACCCTCATGTAGGCACTAGCAGCAGCATCCAAGACCGTTGACTGCCTAAAAGCGGTGCACAGTTTGCACGCAATTTTCCTTATCGCAGGAGACAAGAATTGTAAGTTCTCTAAGCTTGTGTAGTAGTTCTCTTCTCAATCAAGTTGAATTTAAACTACTCCAACAAAAAATGCAATTTTGGGAACCACTAGTCTATCATATCACGAAGAGGTGACCTAAGAAGAAACCAATGCCAACAAAATGTAATTTTGATAACCACTAGTCTATTAGATCAAGAAAGGATGGTTTAAGACGAAGCTTTACTCTGCCTTCCAAATTATGCATTGTCCCTGACTTAGAAATGAGCAGTGGATTAATTTGTGCAAACTTTTTTATGAGTCTATCTTTTGAGCTGTCATCTTAGTAAGCTGCAAATAATTATGCAGTGTAATTTTATTTATTTGAAAAAAAGAATAAATCTGATCATGTCTGTTTCTGTTTTGTCCTCTGTTGTAGTGCCAATAATATATCAGGTTCATCGGGCGCGCGATGGAACAAGCTTTGCCACCAGAAAAGTGGAGGCAAAGCAAAAGGGCCTTGTCATTTTCACCTTGATTGCTTCATTCCAGGTGTTTATCCTTCTGGTACCCAGTTTTGTGAACAATGTACAGCCTCAGGAAAATTTTGGCATATTAGTATTAATCAAGCATTTGATTCTCTCGATGGCTTCCATTTTGGGCCTGTTTGGTTCTCTTCCATTGCTAGCCTTGCCAATTTTTTGGCAATGGCAAGATTTGGCAAGCCAAAAAAATTGGTGGAGGTGGCTGTTTTGAGTGATACCAAAATTTTTAGACTAGGCTAGTGCTTAAGTTAACCAAACAAAAAAAAATTGGCAATGACAAATTTGTGGCTTCATTCCTACAAACCAAATGAGCGACATTTTTGTAGCAGTGCATTATTTGGTAAGGTTGGGTTTGGCAAAGAAGCAAACAAGCTCAACTCCCTCCCATCATAAATATTTGGTGTTTAGGACAAGAATTATTAAAACTTTTGAAACTTCGACCATGAATAGCTTCTCAAATGCTTAGTTTAAAAACAAAAAATGGGTATAGACAGATTTATTTTTAAAAATAATATCTTAATATCATGAACTTACTAGATTTGGTAAGCCTATTCTAATATAAAACTGATAGTTAAAGTTTTAAATGTTTGACAATCTTGTCCTAAACGTCAAATATTTATGACCATAGGGAGTAAAATTTTAACTACACTTTTAACAATATATTACAGTAAAGGTAGTGGTCAAAACTGTGTTGTGGAGACCACATCATTGTTTATAAACTTTTTTTGTGACTAGAGGGACCAGTAGAATGTTCTTTTTGCAATATTCAATATTCATACTGAACGCTGTCAACAATAACGAACTGTTTGAACTCTTGTTAAATCCTGAGGAAATGTGTATTTTCATGTTTATACTACTTTATACATTAAGCCAAAAGGTTCGTGAGACTAAATCTGCCAGCAGAAGAATAGATGGTATCTAACTTCTGCATGATCAATTATGTTGCAGAAAGACGAATTAGGGTTTGAGCATCAAGCTGCAATCATGCCTGATGTTCCTCCTCCAGAAGAGGTAATTTTTTTTTCTTTCCTGTAATGTATATGGGAAAGAAGAATTGATAATTAATAGGTAATCAAATGCAGCTCCTGAATCTGGAAGAGATACGGGAAAGAAGACTTACTGATCCTCGCTTCCCAATGTAATTTTCATGACTTCCAACCATATATTTGATGATGATAGTTTCCTAGCTAATGCAGTCAGTTCTCAGATGATTCATCTTTAATCTTCAGAATAAACTTCTTTTATGTTATTGAGAAAGCATTATATTTGTCACCATTTATTTCTCGGACACTATATTTGTCACCATTACTCAGATGAATCTAGCATCTGGTATTACATAAATTAGAAATTATCTGGTAGTATTTCTCACGTTTAGTAAATCAAGCATTCTATCTTCTTAAGCTTCAATTATAACTGTATTTGGTTCGTGCCACAGTCGCATGCCACCTGGCAAAGTCTTGACTGTTAGTCATCTGCAGGCAATATAGGAACTCAGCTGCCAAGAAAAAGTTCGTACCTTGGCCCATAGAAATGAGGTTTTGTGAAGATTCAGCATCTCAACATAAACCAAGGTATGTACACACTGTGTTTTCTTTCAGTGCAGCCTGCTCATACCTTCTCTCCTCCCCTAGTTGGTGATAACTGATAAGTTTACCACGAAATTCTTGTGTACTTTCATATTCACGATTCTAAATTCCACTGTGAAAACATCCAATTTTAATTCCATTGTGCAAGAATTTATCGCATTTCCTGCTACATTGCAATTTAATACATTGTTCTGATTCATTAGTGCATCTATTCCATTATCTAAAAAAATGTATCCGATTTCTTTCAGCTTAAATTATTGGTTTAGAGCCAGAGGAAAACTTTCTGATGATCCAGCACTGCATAGGTTTGCCATCTAATCACTATACCGTGTTTCTTGTATTATAGATGATTGGGCACGACATTAAACCATGGTATTACAGGTGTGTTGTAGCATATGCTTCGGATCTACTATATTCTGGTGTCAGCCTAAATCCTCATAGGGAGAAGGGTCTGAAGACATACTCACTCAGTCTTGATCACTCGTATGTTTCAGCAAACCGCACCCAGTACTGCGATTTTAATTAATACAACTCGCTAGTAAACCGTTTGTTTGTTACTGTTCTGCAGGATTTGGTTCCACAAGCCTGTGAAAGCTGATGATTGGCTTTTATATGTGGTAAGCCATTGATTTTTACCTCTCAAATGATACACAAAACTAAATTTCTGCTTGAGGTTCTTATGGCAACACCTTCCCTTAATAAACACAGATCGACAGCCCATCTGCACACGGTGGGCGGGGTTTTGTTACAGGGCGAATGTTCAACCGACAAGGAGAGGTATATGCCTTCGTTGTTTCAAAGCTTAGTTCAGTTCTGCATTGCTTCTGTGATGGAAATGTTTATCAACTTACTATGATCTCTTCGCAACTGCTTTAGCTCGTCATGTCGTTGACCCAAGAGGCGCTGATTAGGAGGGCGAAGACGCCAGGACAACCGTCACAAACCCCAAGGCCAAAGCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016909