Os08g0116400

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Gene Name

Os08g0116400

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001067388.1 GI:115474512 GeneID:4344515

Length

6108 bp

Definition

Oryza sativa Japonica Group Os08g0116400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:891932..898039

Sequence Coding Region

892285..892342,892431..892492,893255..893323,893423..893470,893552..893611
,893739..893851,893925..893997,894072..894116,897260..897403
,897511..897555,897905..898039

Expression

GEO Profiles:Os08g0116400

Genome Context

<gbrowseImage1> name=NC_008401:891932..898039 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:891932..898039 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctcctcctctctagagagagaaacagaaaaaaggaggagactagggctctgctcctccccctgcgccggttggtcggagctctgcctcctcctgattctgctgtcccctcccctccccgatccacctcctcctcccacgtcttccccgccgtcgatggcctcgccggaccccgacccaggaagaagggcggaggaggaggtggaggaggagggttcggtggccagggccacgccgggaagcgccggatgaacagccgcaccagcatggcgcagcgcgacgaggtcatccgccgcaccgtctacgtctccgacatcgatcaccaggtcactgaagagcaattggcagcactatttatcaactgtggacaggttgtggactgtcgtatgtgtggggatccgaattctgttcttcgttttgctttcatagagttcactgatgaggagagtgcaagggctgctctaaatttgtcgggaaccgtgcttggatattatcctgtcagggtgctgccatcaaaaactgcgattgcacctgttaacccaacatttctgcccaggtccgatgatgagcgtgagatgtgtgcaaggactatttactgcacaaacattgacaagaaggtctctcaggcagatgtgaaattgttcttcgagtcgatatgtggagaggtatatcggctgaggttgcttggtgactaccatcattctactcgcattgcctttgtggagtttgtgatggctgaaagtgccactgctgctctcaactgcagtggtgtcatactgggttccttgccaataagggtgagcccctcaaagactcccgtgcgtccccgtgcacctcgccagctgatgcactag</cdnaseq>

Protein Sequence

<aaseq>LLLSRERNRKKEETRALLLPLRRLVGALPPPDSAVPSPPRSTSS SHVFPAVDGLAGPRPRKKGGGGGGGGGFGGQGHAGKRRMNSRTSMAQRDEVIRRTVYV SDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTV LGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESI CGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPR APRQLMH</aaseq>

Gene Sequence

<dnaseqindica>5698..5755#5548..5609#4717..4785#4570..4617#4429..4488#4189..4301#4043..4115#3924..3968#637..780#485..529#1..135#ctcctcctctctagagagagaaacagaaaaaaggaggagactagggctctgctcctccccctgcgccggttggtcggagctctgcctcctcctgattctgctgtcccctcccctccccgatccacctcctcctccatctccttctcctcccgccgatccgatgcgtcatcactagcctcccctcccgcgcttccaccaaccactgcccctccaccctcacctcgtggtttggtaatttggttggccgcttgtccccttccatccaccgatccaccttcccgttgctgcggggatggccgtcgtcgagacctccgccgaccacgccgcgcctccgccgcccgagggggacgccggggagagggagatgcgggatctggaggacctgctctccaagctcaaccccatggccgaggagttcgtcccgccttccctcgccgccgcctcccccaccgcctacgcctactaccccacccccaccccctcccacgtcttccccgccgtcgatggcctcgccggaccccgacccagggtaacaccaaccaaccacctcaggagttttgtttcaccttttcccgcggcttctgctgttcctcctgattctcacgctcttcgtctcatctcttctcttctccgcagaagaagggcggaggaggaggtggaggaggagggttcggtggccagggccacgccgggaagcgccggatgaacagccgcaccagcatggcgcagcgcgacgaggtcatccgccgcaccgtctacgtctccgacatcgatcaccaggtcacccacccccacccccacacatggatccggttcatttctctccatttccgccgcgctatcaatcccacaactctatttcgcctgtcgatttgattcgtcatgccgatttcctgtatttctcatgattagttgattatatcagttcgatttgggtcacccgtgctgttgagatgggttagggacgaaaccatttacaggatctcgatgagagagaccatgagacagagtcacatagacgatgaatcatgaatgggtatggatgggtgggaggagcaggttgggatgtacagtacgctaccatgggtcatcctctctgttgctttcatagatttgggtgccccttcttaccaaagctctgcttttgcacttctcggcgaattatttcctatggaatctagaaagttgtagtatgggtgttttcttttttccttttctgtgcttacgttcggtgcagccagccttgttgagttatttgttttcttctctggttgtttggcacttctaccttctttggcttcttcacatatcctgcacctgtagtatgtcaccttggtagctttcgtgcctgcaacgttgcatacgttacgcatgtaactaattcaatctagtaatatgcaaacatagccaccataaatgtgggagttactttgctagctatgtatttctggaaatgtcttcatttatgagccctgcttctatgttccttttgtatgctctagtcctaataggaaacaacagtaactaaaatccatgccctgttgtgtattaccaccctgcaaaattagtatattcagagtgataacttcttgagagtaaatgcttaggatttcttatttggtgcgatacagccaggaccagattttatatgtttctgttcatgagtgtatattgtggtttcgtgctgacattcctagcctgcatggtctggttggttttcattaaggtagtctcatatccgcatattggaaatgaacgtcaaattatttggttgctcgtgatgtttactaagattgaggctttaaatggctgattctgtttgctagtgaacgcgttcttttttggtgcaggatgatcaatgttccattagttatacatctcccttcttggatctagtattttccctaataggtatatactgaaacaattttattgccatgttcgtgagtgcaagatacctaaatgtttcttgccatgttcgtgagtgcaaggtacctaaatgtttctctctttggcatatctgttcggtagaaagaaaaaagcacatcactttatggtgttctgtacattttagctgtagcatttaggcagtattgtgtactgtgttgtgtatgtgatgacaatagtacctgtgcatttgcagtctgtacacattcaatggatttatattctgtcctacttgtagccatattcttggttgaagtatgctagaagtttagaaaatgcattctctttgccctttgtttgagctctgttgagataactgtacgtacagcaagatgacacatacggatgcatttttaatgagtaaattgctcttgcggtataggaacttagtgagtgggtgcgatttagtgcaataacttgaaatttgtgcaaattggtatataaacttgccaagtaggtgcattttctgatttggcagagccacgcgtgcaaaattgactatgtcggcatgcaaccgtgaattggttctattgagaggagtccatgctagattggtgtttttcctgacaacgatgatgtctagggctagagttcagacgatcgcattgagaatgtcggcagtgtggatgtatagtgtgaggacaaggttcagcaggccaatcttctctgcttaagccgcttgctagaagttttctgtctcccattggattgcttgctgcagcagggagaagaatcacattgattgtaggaacggaaaaaatcaaattaagcaatggaaacagctttagtccacaagttttacacagttcttgcaagatatcaatcatctctgatcatcgaatggtgctgcacggtgttgcaacggcaggaggtacctgagcacggtggggatccgatggcacactgacatggtcgcttttgaacatgtggcacagtcaaatcagaaaatgcacccacttgtcaacttgttataccaatttacacatatttcaagttcttataccatgagcgcaatttaatctttttcaattaatcctttgttcgagactgtatgtatagcagcaagctgacacgaatggatgcctcttttcttttttaattccaggtgtcgtcatttagcctgtctatagatgggtttgagcttagttggtggaatgctaggtgtagttcatccaagcattttgtaggtgcatttgcatcacttgttatggttcttagataatcttaggacaacttgtcacattattgtttttcatgggattgtgtggatatccaagccaagtgtacctttagtctctatgtttagcattgttcctaatgtaacgctgaatcacgagtcagatgctttacgttttatgtccatggtaaatatgattttgctttgttctattatctgtataacaatgtccttgtgtgctccatgccatactattttgtggcatatactctgatactcataacaagatgcaaatcactcgctacttctcttttgacaaatgaggtcctgttaaagatatgcagccatgcaaattattccaattgtatcttctttatatttgccatgtcggcattttttatgtaccgaaagctttacactgaatcagcttttcttgaagaaattgtgtgacaaggtctgagatctatggcatcacttatgttagaggtgctgctaatggttttgcatttactatagttgtgttctgtaaggctatgttctctcagtgttgaaatgcctaattcagcattcaaagggttattttaaatttatttttcacttggctgttcttctgtattgataaagtttataaattcaacttttggagcctgttgaactccataagtccatatttgtattattgttctgctgttccattgtgcaagatgatatccagtttccttttattcccttctttttaatgcagttgcaaatcagaaattgtaagcatgttgatagctttcattttcttggtgttcaggtcactgaagagcaattggcagcactatttatcaactgtggacaggtacatttttctggctccacacttgctttctgtgataattgtgcataataatcttgaaatttttctttctgaaggttgtggactgtcgtatgtgtggggatccgaattctgttcttcgttttgctttcatagagttcactgatgagggtaagtggtcgagtgataattaagcatatacttagatcaatagtcaattggttaataaactgctctgctgcagagagtgcaagggctgctctaaatttgtcgggaaccgtgcttggatattatcctgtcagggtgctgccatcaaaaactgcgattgcacctgttaacccaacatttctgcccagggtaagctgaatctgcacaattcatgtatttgcataaatttcattattaattcttatttcaatgaaatttatgcaaatacgtgtacacctgatgtctaaaagctggcccccattcttgttgcctgcagtccgatgatgagcgtgagatgtgtgcaaggactatttactgcacaaacattgacaagaaggtatgctacaatttgcttgtactctgtttttcgttatcctttatgctcatgtttctttggcatttgatgcatttgatacaggtctctcaggcagatgtgaaattgttcttcgagtcgatatgtggagaggttggtgatttgtcattccttatgtcaaccttttcttcacaatcatactgaaatgcaattcaaggaacaacttccctcattgcaataccacctttacaggtatatcggctgaggttgcttggtgactaccatcattctactcgcattgcctttgtggagtttgtgatggtcagtatgtcttgcctgtttcatatttgtctaaaattgctgcatttctacacacattaaatttttagtgttactagttgacaacacagaatagcacactgctcacgactttgtagaaaatatgcacaatgaactgttctctagtcagtttactgtggtttctaggtagttcgattttttaaagaacttttatggaatccagttgtcaatcagtgcagcacgaaattgttctgcgctatctgagttttagtccaatcaactgaataaatcagctagaaaacagttcagagcctttgatgttttgagcgagaactgtggaaagacgagatcgagtgtatttggtatttacataattccttgctatttgatatttttcttctccattagtcctactcaacagtgatttcctgttaattggtgacaacagatgtgttggttggtgctatgaattatgatctcttgtctagcattgcatggcagtataggtggatttttaaaatcatgtcctggaaccctggactgtggtcctaagtactcttgattgataagtttcctgcttacaggaactgttgctagctgtttctgtcattatgctaagtgcattaacttgatacgccctcagctttgaagcatattgtctgtgggggtggggggggggggtcaaacttgtattcctttatccaaaatcttacatggtgctagtttctgtgtatacataactgatctctatcttacgtttaacttctttttgtcaacattcaggctgaaagtgccactgctgctctcaactgcagtggtgtcatactgggttccttgccaataaggtaaagatgtggtctttcacatattgacagcttttgtacaaacaagttatttacggaaatgactgaggcggctttgcttatatttcagggtgagcccctcaaagactcccgtgcgtccccgtgcacctcgccagctgatgcactaggtgttgtaggtacaggaggtgctgatggcactgcttatatatagagatagacatatatgaaagagaagttacgatatatgtcttttgttttatctgctcggccttctttttactgtaccgttagtaagtatctacacttgcaacggaggggggaaaccgttaccgggtttggtctttttcttttttaccttgcacatagcgcttcttagaagcgggcctgacgcttttgtccttgatgcagcaaggcaaaactcctggacttttgtcgctgttcagttgtttgctgtgtcttgtttgctactgagaacctgatgaactcgttacctgaaaatggagacttatcgttatgctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0116400, RefSeq:Os08g0116400