BGIOSGA016918

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Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016918| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016918, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016918

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016918, complete gene.

LocusTag

OSJNBA0084K11.14

Ensembl Transcript ID

BGIOSGA016918-TA

Ensembl Protein ID

BGIOSGA016918-PA

Length

4033

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26907789..26911821

Sequence Coding Region

26907789..26907907,26908732..26908954,26909063..26909269,26909356..26909426,26909515..26909680
,26909806..26910405,26910545..26910925,26911014..26911089,26911183..26911246
,26911345..26911477,26911559..26911672,26911756..26911821

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26907789..26911821 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26907789..26911821 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCCTACCCGCCGCCGACAAGCCGTTGCCGGCGCTCCGGTACCCTCCGGCTCGCCGCGACGACGACATTGTCGACGACTACCATGGAGTTACCGTGCCGGACCCCTACAGATGGATGGAGGAGCTGGAGTCGGAGGAGGTGAAGGGGTTCGTGGACGCGCAGGCGGCCGTGGCCGAGGCGGTGCTCTCCACCTGCGACGACCACCGCGTCCGCCTGCGCGGGCAGCTCACCGCGCTCTTCGACCACCCGCGCTACCGCGCCCCGTTCAAGCGCGCCGGCAGCTACTTCTACCTCCACAACCCCGGCCTCCAGCCGCACAGCGCCCTCTACGTCCAGCACGGGCTGGGGGGCGGGGAGGAACCTGACGTGTTGCTGGACCCAAACACGTTCAGCGACGACGCCACCGTGTCGCTCGCCATGTTCGGCGTCAGCCACGACGGCGAGCACCTGGCGTACGGCACCAGCGCGAGCGGCAGCGACTGGGTCACCATCCGGGTGATGCGCGTGCGCGACAGGCGGCACCTGCACGACGAGATATGCTGGGTGAAATTCTCGGCCATCGCGTGGACTCGCGACGGGAAGGGGTTCTTCTACTCTCGTTTTCCAGCTCCAAAGAATGATGGGGCGCCATTGGGTGCTGGGATCAAGACTAGTGTTAATCTCAATCATGAAGTCTATTACCATTTTCTTGGAACCGATCAGTCAGAGGACCTGTTGTGCTGGGAGGACCCTGACCATCCCAAGTACATTTACACCCCTGAAGTTTCAGAAGATGGCAAGTATGTGATTCTGTCAGTCGCAGAAACTTCAGAACCGGTAAACAAGTTGTACTACTGTGACCTCTCGGCTCTCCCTGACGGCCTGGAAGGCATGAAGGGAAACCATGGCAATGCCATGCTTCCTTTTGTTAAGCTTGTGGATGAATTTGAAGCATACTACGCACTCATCGCCAATGACGACACTCAATTCACATTTCTCACTAACAAGAATGCTCCAAAGTACAAGCTGTCGAGGATTGATGTCAACGAGCCACACTCATGGATGGATATTCTCCCTGAAGACGAGAAGGCTGTCCTAGAGTCGGCTTGTGCAGTCCATGGTGATAAGCTTCTGGTAAACTACCTGTCGGATGTCAAGTATGTCTTGCAGATGAGGAGCTTGGTTACCGGGGAGTTGCTCCATGACATACCCATTGACATTGGCAGCGTCAATGGGATCTCTGGCAGACGTGACAATTCAGAGGTGTTCATCGAGTTTGCTAGCTTCCTTACTCCCGGAATCATCTATAGGTGTGATGTCAGCAAGGAGACTCCCGAGATGAACATATACAGAGAAATCTCGGTTGGTGGTTTTGATCGCACAGATTTTGAAGCAAAGCAGGTGTTCTACCCTAGCAAGGATGGAACCAAGATCCCAATGTTCATCGTGTCGAAGAAAAGCATCGTTCTTGATGGATCTCACCCGACTCTGCTGTACGGCTACGGTGGCTTCGGCATGAACATGACGCCCCATTTCAGCGTCACCCGCATCGTCCTCATGCGGAATCTCGGGTTCGTGTCGTGCATCGCCAACATCCGAGGCGGCGGGGAGTACGGCGAGGACTGGCACAAGGCCGGGTCGCTCGCGAACAAGCAGAACTGCTTCGACGATTTCATCGCGGCTGGTGAGTTCCTCGTCTCTGCAGGCTACACGAACTCGAGCAGGCTGTGCGTCGAGGGTGCGAGCAACGGGGGCCTTCTTGTAGCTGCCTGCATCAACCAGCGTCCGGACCTTTTTGGTTGTGCTCTGGCTCACGTGGGTGTCATGGACATGCTTCGATTCCACAAGTTCACCATAGGCCGTGCATGGACCTGTGATTTCGGCTGCTCGGAGAAGGAAGAGGAATTCCACTGGCTCATCAAGTACTCTCCCCTCCACAACGTCAGGCGGCCATGGGAGAAAGGTCACCGGAGGCAGCAGTACCCTTCCACCATGCTGCTGACGGCGGACCACGACGACCGCGTCGTGCCGTCGCACACGCTCAAATTCCTCGCGACGATGCAGCACGTACTGTGCACGAGCGTGAAGGAGAGCCCGCAGACGAACCCGATCGTCGCGCGGATCGACCGCAAGAGCGGGCACGGATGCGGCCGCTCCACGCAGAAAATCATCGACGAAGCTGCGGACAGGTATGCGTTCGCGGCAAAGACGATGGGGATCTCTTGGATCGACTGA</cdnaseq>

Protein Sequence

<aaseq>MGSLPAADKPLPALRYPPARRDDDIVDDYHGVTVPDPYRWMEELESEEVKGFVDAQAAVAEAVLSTCDDHRVRLRGQLTALFDHPRYRAPFKRAGSYFYLHNPGLQPHSALYVQHGLGGGEEPDVLLDPNTFSDDATVSLAMFGVSHDGEHLAYGTSASGSDWVTIRVMRVRDRRHLHDEICWVKFSAIAWTRDGKGFFYSRFPAPKNDGAPLGAGIKTSVNLNHEVYYHFLGTDQSEDLLCWEDPDHPKYIYTPEVSEDGKYVILSVAETSEPVNKLYYCDLSALPDGLEGMKGNHGNAMLPFVKLVDEFEAYYALIANDDTQFTFLTNKNAPKYKLSRIDVNEPHSWMDILPEDEKAVLESACAVHGDKLLVNYLSDVKYVLQMRSLVTGELLHDIPIDIGSVNGISGRRDNSEVFIEFASFLTPGIIYRCDVSKETPEMNIYREISVGGFDRTDFEAKQVFYPSKDGTKIPMFIVSKKSIVLDGSHPTLLYGYGGFGMNMTPHFSVTRIVLMRNLGFVSCIANIRGGGEYGEDWHKAGSLANKQNCFDDFIAAGEFLVSAGYTNSSRLCVEGASNGGLLVAACINQRPDLFGCALAHVGVMDMLRFHKFTIGRAWTCDFGCSEKEEEFHWLIKYSPLHNVRRPWEKGHRRQQYPSTMLLTADHDDRVVPSHTLKFLATMQHVLCTSVKESPQTNPIVARIDRKSGHGCGRSTQKIIDEAADRYAFAAKTMGISWID</aaseq>

Gene Sequence

<dnaseqindica>1..119#944..1166#1275..1481#1568..1638#1727..1892#2018..2617#2757..3137#3226..3301#3395..3458#3557..3689#3771..3884#3968..4033#ATGGGCTCCCTACCCGCCGCCGACAAGCCGTTGCCGGCGCTCCGGTACCCTCCGGCTCGCCGCGACGACGACATTGTCGACGACTACCATGGAGTTACCGTGCCGGACCCCTACAGATGGTGAGTGTCTTGTCGACGGCTGTTTCCGTTCCTCTGTAATCGATTCTGTCCTGTTTTGAGAGGCACTCTGTTTGTTACGTTATGTTATGCACATCTGCTTTTTCTGAATTTTACCCTTTTTACCCGGCTTGAACCATTTCTCTGTTCGTGCAACATGAAAAAACATAGTTCCTAAATTCATGGAAAGAAGTACTGCTTCAGGATAAGAGTGTTAGAATTCCTGAGGTTCAGTTTTTTTTTAATCTCATTTCTTAATAAACTTCGGCCGGCTTAGGGCCTGGCGAAACAGTTTTTTTATATAAAAATATTCATTATATTATTGACATGCATTATCTACTTTATTGTAGGATAAATTAAATATTTTTTATAAACAAGTTGTCTAAATAATACTTCCTCTGTTTACTATGTAAGTCTTTTTTTTTGCGGGGCACTATATATGTCTAGATTTATTAACGTTAATACGAATGTGAAAAATGTTAGAATGATTTACATTATTAAACGGAGGGGGTACAGTAGAAGAGATTTTCTTTTGAAAAGAATGTAAGTATTTTAGCATATGGTGTGCAGTAAGAATGTAAGACGCATTCCCTTGTATACCGCAGTCAAAACACTTGGTAAATCCCAGAATGATTGCGTTTGGAATACCACTATATAGTGCAGACGAAATGCAAATCGAAGCAGAGTTGAACACTTGAACACGATTCTTCCCGTACGTTCTCAGTCCATCCGATCGAAACAAAGCATGAGTAATTTTGTTCTTATTATTGTTGGACCGTGCGTGGTTGATGATCGCTGATGTATTGTAAAATTGACCGCGAGTGAAGGATGGAGGAGCTGGAGTCGGAGGAGGTGAAGGGGTTCGTGGACGCGCAGGCGGCCGTGGCCGAGGCGGTGCTCTCCACCTGCGACGACCACCGCGTCCGCCTGCGCGGGCAGCTCACCGCGCTCTTCGACCACCCGCGCTACCGCGCCCCGTTCAAGCGCGCCGGCAGCTACTTCTACCTCCACAACCCCGGCCTCCAGCCGCACAGCGCCCTCTACGTCCAGGTCAATCAAAGCCCCCCACGCGAATCTCGAGGCCACCCAGCAGAGTCCGAGAGAGACGCTAGCTTTCTGCAATCTGAACCGTCGCTTTTGTTGTTGTTGTTGTTGCAGCACGGGCTGGGGGGCGGGGAGGAACCTGACGTGTTGCTGGACCCAAACACGTTCAGCGACGACGCCACCGTGTCGCTCGCCATGTTCGGCGTCAGCCACGACGGCGAGCACCTGGCGTACGGCACCAGCGCGAGCGGCAGCGACTGGGTCACCATCCGGGTGATGCGCGTGCGCGACAGGCGGCACCTGCACGACGAGATATGCTGGGTGAGCTACCCTCTGCCCCCGTGCGTGGCGCACGGTCGATCGTTTCAGAGATCCCTAATATGATTGTGAATTCGAGAAATTTGCAGGTGAAATTCTCGGCCATCGCGTGGACTCGCGACGGGAAGGGGTTCTTCTACTCTCGTTTTCCAGCTCCAAAGTAAGTGCCAACATATAGTAGTGGATTTGTTGAAATATGCTACTCCTACAGTCCTACTTGACATAGCGTCGTTTGTTTGGACGAGCAGGAATGATGGGGCGCCATTGGGTGCTGGGATCAAGACTAGTGTTAATCTCAATCATGAAGTCTATTACCATTTTCTTGGAACCGATCAGTCAGAGGACCTGTTGTGCTGGGAGGACCCTGACCATCCCAAGTACATTTACACCCCTGAAGTTTCAGAAGATGGCAAGGTATGCAGCTATGGCCATGAGTCGATCAACTTAGGACGAAGTTTTGTACAACTCTGAATCTTTTCTAAGCATTGACAAACATGAGCTACTCCTGAGCTGATATCTCATCACTTCACTTGTTGCAGTATGTGATTCTGTCAGTCGCAGAAACTTCAGAACCGGTAAACAAGTTGTACTACTGTGACCTCTCGGCTCTCCCTGACGGCCTGGAAGGCATGAAGGGAAACCATGGCAATGCCATGCTTCCTTTTGTTAAGCTTGTGGATGAATTTGAAGCATACTACGCACTCATCGCCAATGACGACACTCAATTCACATTTCTCACTAACAAGAATGCTCCAAAGTACAAGCTGTCGAGGATTGATGTCAACGAGCCACACTCATGGATGGATATTCTCCCTGAAGACGAGAAGGCTGTCCTAGAGTCGGCTTGTGCAGTCCATGGTGATAAGCTTCTGGTAAACTACCTGTCGGATGTCAAGTATGTCTTGCAGATGAGGAGCTTGGTTACCGGGGAGTTGCTCCATGACATACCCATTGACATTGGCAGCGTCAATGGGATCTCTGGCAGACGTGACAATTCAGAGGTGTTCATCGAGTTTGCTAGCTTCCTTACTCCCGGAATCATCTATAGGTGTGATGTCAGCAAGGAGACTCCCGAGATGAACATATACAGAGAAATCTCGGTTGGTGGTTTTGATCGCACAGATTTTGAAGCAAAGCAGGTAATTTTCAATAGCATTACGAGCTCTTAGCACGATACCTGAACTTTGTAGAAGTACAATGCATTTTCAGAGTTGCACAATTCCTGTTTGTAATTCAGCTAGCATTTCTCCCTATTTTTTTCCTCTCCATTTTTTTCAGGTGTTCTACCCTAGCAAGGATGGAACCAAGATCCCAATGTTCATCGTGTCGAAGAAAAGCATCGTTCTTGATGGATCTCACCCGACTCTGCTGTACGGCTACGGTGGCTTCGGCATGAACATGACGCCCCATTTCAGCGTCACCCGCATCGTCCTCATGCGGAATCTCGGGTTCGTGTCGTGCATCGCCAACATCCGAGGCGGCGGGGAGTACGGCGAGGACTGGCACAAGGCCGGGTCGCTCGCGAACAAGCAGAACTGCTTCGACGATTTCATCGCGGCTGGTGAGTTCCTCGTCTCTGCAGGCTACACGAACTCGAGCAGGCTGTGCGTCGAGGGTGCGAGCAACGGGGGCCTTCTTGTAGCTGCCTGCATCAACCAGGTTTTCTCACTGTAACCTCTTCAGTTTTTTCAGTTCTCTGCAGAAGATTGAGCAAGAACTCACTGTGGATTGTGCATTTTTTTTACAGCGTCCGGACCTTTTTGGTTGTGCTCTGGCTCACGTGGGTGTCATGGACATGCTTCGATTCCACAAGTTCACCATAGGTTCTGACTCATCCCTGAAACCCATATACTTGAACTTTCTTTTTCGTTGAAATATTTCATCTCACCAATGTGCTCGGCAACACTTGCATGCAGGCCGTGCATGGACCTGTGATTTCGGCTGCTCGGAGAAGGAAGAGGAATTCCACTGGCTCATCAAGTATGGCACTAGCCCTCTCTCTGACCACCAAGGAATTCTTAATCCTTTTTTCCTTCAGTCACATCATAACTTAGCAATGCCAAACTACTGACGTGCAGGTACTCTCCCCTCCACAACGTCAGGCGGCCATGGGAGAAAGGTCACCGGAGGCAGCAGTACCCTTCCACCATGCTGCTGACGGCGGACCACGACGACCGCGTCGTGCCGTCGCACACGCTCAAATTCCTCGCGGTGCGACCCGTGATCTCTCCTCCTACCTTCGCCGCCATTTTCTCTGGATTCTGATGAATTTTCTCTGTTGATTGGGGGCAGACGATGCAGCACGTACTGTGCACGAGCGTGAAGGAGAGCCCGCAGACGAACCCGATCGTCGCGCGGATCGACCGCAAGAGCGGGCACGGATGCGGCCGCTCCACGCAGAAAATCGTAGGCGAAATCTTTGCTCGTCTGTGTGTGTCACGTTTTTTTCTGCTGATTTAACTGAATTTTGCTCCGTCCGTGGGTGGCAGATCGACGAAGCTGCGGACAGGTATGCGTTCGCGGCAAAGACGATGGGGATCTCTTGGATCGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016918

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016918&oldid=65812"