BGIOSGA016920

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016920| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016920, complete gene.| tag = H0211B0...")
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Gene Name

BGIOSGA016920

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016920, complete gene.

LocusTag

H0211B05.5

Ensembl Transcript ID

BGIOSGA016920-TA

Ensembl Protein ID

BGIOSGA016920-PA

Length

4975

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26930173..26935147

Sequence Coding Region

26930173..26930239,26930316..26930430,26932065..26932139,26932222..26932293,26932411..26932545
,26932631..26932688,26933335..26933444,26934158..26934244,26934369..26934452
,26934808..26934873,26934973..26935147

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26930173..26935147 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26930173..26935147 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCGCTGCGGAGCCGGAGGTCCCTGCGTGTGGATCCGGGCCCTATCCCAGCCGCAACGCCACGGGAGGAAGCCATGGCGGGGCGTGAGGGTCGTCGTGCTGCTGCTGCACGCGCTGTTCATCGGCGCCGTCTTCCTGCTCGATCCGACGCTCCAGAGGCAAATCCACGAGGCCAAGTGGTACATAATTCTATATGGGTTGCTGGTTTTACTTACCTTGGTACAATACCTATATACAGCCACTTCTTCTCCAGGATATTTACCTGATATGTTGACAGCTGGCTCAAGGATGCATGCAACCTTTATTAATACAACAACTCTCTCAAAGCAGGCCAATTCCAAAAGTGGAAGCTTAAACTCTGCCATGAGTCGCAGCAAAATAGATCAGCAAAATCCACAATCCACTACAGCTTTGTTACTACAGCAGACGATGGATCTATATCCTCCTGGGACATCCACCAGTTGTATGCCTCCATTTTATTTTAGGGATTTCACATGCTCTTACTGCCGGCTCATCCAGCCTCCACGCACCAAGCACTGTCATGACTGTGATAAATGTGTCCTCCAATTTGATCATCATTGTGTTTGGCTTGGAACATGCATTGCTAAAAGGAACTACTGCAGATTTTGGTGGTACATATTCGAACAAACAGTTTTAACTGTCTGGACTGTTGCTTTCTACATTCAGTTCTTTTATTTGGGCATCGTTGTATCCTGGTGGAAGTTTGCTATTGGTATTGTACTTTTGGTAGCATTGATATTAATCCTCGTGGTCCTGCTGCCCTTGTTGATATTCCATGCTTATCTTGCTCTTACGAACCAAACAACATATGAAATTGCCAGAAGGAAGCGGATTTCTTACCTAAGGGAGGTTCCTAGCAGGGTTCATCCATTCAGCAAAGGCATTTGCAGAAATCTGTATGATCTTTGCATCTCTAAACAGAGGGGATTTTTTCTGGAAGCAGTGCCCCCGCTGGAGGTACTACAAGCCAGAGCTAGACCTTACACATGCCGAGATGTAATCTCCTGCCGGTGCTGTTAG</cdnaseq>

Protein Sequence

<aaseq>MPRCGAGGPCVWIRALSQPQRHGRKPWRGVRVVVLLLHALFIGAVFLLDPTLQRQIHEAKWYIILYGLLVLLTLVQYLYTATSSPGYLPDMLTAGSRMHATFINTTTLSKQANSKSGSLNSAMSRSKIDQQNPQSTTALLLQQTMDLYPPGTSTSCMPPFYFRDFTCSYCRLIQPPRTKHCHDCDKCVLQFDHHCVWLGTCIAKRNYCRFWWYIFEQTVLTVWTVAFYIQFFYLGIVVSWWKFAIGIVLLVALILILVVLLPLLIFHAYLALTNQTTYEIARRKRISYLREVPSRVHPFSKGICRNLYDLCISKQRGFFLEAVPPLEVLQARARPYTCRDVISCRCC</aaseq>

Gene Sequence

<dnaseqindica>1..67#144..258#1893..1967#2050..2121#2239..2373#2459..2516#3163..3272#3986..4072#4197..4280#4636..4701#4801..4975#ATGCCGCGCTGCGGAGCCGGAGGTCCCTGCGTGTGGATCCGGGCCCTATCCCAGCCGCAACGCCACGGTGCGCGCTACCGTTGTTTGGTTCGATTTTGGCTGTGGTTCCGATTTCGCTGTGGGTCTTACCGATTTGTGCGCAGGGAGGAAGCCATGGCGGGGCGTGAGGGTCGTCGTGCTGCTGCTGCACGCGCTGTTCATCGGCGCCGTCTTCCTGCTCGATCCGACGCTCCAGAGGCAAATCCACGAGGCCAAGTGGTACGAGTACGACCCCCCCCCCCCCCCCCTTGAAATTTCTCCGAAATGTTTCCGTCGGAGTTCGTGTTATTGGTTTCTGTTTGAGCTATATGGAGTCGATTTGCTCCTAGCTTCGGGTGGCAACTAGGGCTCTTTACATGGGCAACATTTCGTCGGGTCGTAATTGGCAATTGGCTTGTGTCAGGTCGCAGCCTGCTTTAGTTGAGAGCAAGCATGGTTTTTATGTATGCCTTCTATCTGCAATGCCGTCTGTGAGGATGATGTCGTGAAATTACTGGGCTGAGAGCCTTCCAGCATGTTATAATAGTGTAAATTGTATTTAAGTTTGATATAGAAAAAGAAGGATTGCGTGACATGTTTGGACAATTAGCATGGTGTCCCGCAAATGGTGACATGGGGGCTAAGGGCATATTGCTTGGCACTCATTTGTTTCGTTCATCCTATTCAACACCTGAATTAATAGAAGTTTTAAATGGAACAACATGATTGCCGTATGATTTTCACCAAATATGTTGTCTAAAATTTGTAGTTTACTATGGACATGCCAGGGTAAATCTGCTTCGAACAATGCTGCAGTAGCATTATATCATGAACTTTATAATAATATTAATGGATAAAGCGTCATGATATTGACCTTGAAAACTAAAAACAACATATTTTGTTACTTAGATAACAATTCGATATTCCGAACTAAGATAGTATAAGCCATAAAGCATACCGCATACACCTGATGGAAACTGATGGTTTTTGTTTGTAATTTAGAGATTGTTGTCTCAGATGTTCTAGTGCACATTTTATGACTTGGACAAAGTGACCTTCATAGGAACTGAATAACTATGCTACTAGAACATAAGTGAATTATAAATGCCTATTGATCAATAATTCAATAGATACAATGTGTTGCTCCCTTCCTTCCTTATCAAGCTACCAAGGTATTATCGGAACCACAAATCACTTTTTACTGTTAAAAGTTGATGAAAAACGTGTTTATTTAAAATATTATATAGTCCATAGACCATGTGCATATTTCTTTGTTCATCTTGTTGTCCTTGAGCTATATGTGAAAATAGAGCATCGGATCAAAAGTTGTGCCTATATTTAAAAAAGGGAACATGTATGTTTAACAACCAGTGCTGACATGATGATGGCATCAGCAGACCTTTGCCCCTTTCCTATAATCCACATGCACGTACTTCTTCTTCTAGCAGGTCCACGTGTATGTGCTCAGTTCTCATGAGACCCGTGTTAGCCAGCTTTTGAAGTTTTAAAAACCAGCAGTTATGCTTTATTGACACATATTTTCAATGAGGGTCCACTGAATCAATGGCCAGATGTTTTTTTTTCCTTTTTTGTGAGAATTCGTGATTCTTCTCTCTTTTCTTAGCACTTCTAAAAGGCCTTTGACCAACTCTTATATGTAATATGTAGTTTTTTTTTTTTATCTTAGCACCTCTAAAAGGCCTTTCACTAACTATTGTATATTATATATACTACAGCTGAATGTCAGCTGATGCTGTCCAGCCTATTTGGAAACTGAAAACACTATTGTGTCATTTCTCTGTTTATATGTATATCTAGAAGAAATTCCATCACCCCTCTATTTAATCTTATTCTACAATCTGCTTTGATGGCAGGTACATAATTCTATATGGGTTGCTGGTTTTACTTACCTTGGTACAATACCTATATACAGCCACTTCTTCTCCAGGGTAATTGATCCTTGCGGATGTTGAAGTTTTCCCTAGATGATGACACTTATACGTTGCGTTTACTTGACTCTTGTGCTGTTAGATATTTACCTGATATGTTGACAGCTGGCTCAAGGATGCATGCAACCTTTATTAATACAACAACTCTCTCAAAGTAATGTCTTACTTTATGTTGTTTTGCCTTATGATATATATGTATTTTAAGTGCTGAGCCTGAGTATCGTACACCACTTATTTATGCTAAATTAAATGCCTTTGTGATTAAGAAAAGGCAGGCCAATTCCAAAAGTGGAAGCTTAAACTCTGCCATGAGTCGCAGCAAAATAGATCAGCAAAATCCACAATCCACTACAGCTTTGTTACTACAGCAGACGATGGATCTATATCCTCCTGGGACATCCACCAGGTACACCTGTTTATGTTTGGAATTTATGCTGCTGAAGTGTAATATTCAATATCTTTTGTCATGTAATTTCTGTCCTGTGATACAGTTGTATGCCTCCATTTTATTTTAGGGATTTCACATGCTCTTACTGCCGGCTCATCCAGGTATCTTTGGTTTTCCAAATTTGGCATCCAGAGATAGTATTAACTGAATACAGTGCTCCAAAAATATACAAAAACAAAGATAATTTGACTTGACATAATGTAGGTCTTTCAAGGATGTAACAAACTAACAATCTGCATTTTGTAGGAGGTATGCTTATTATGGTGATTAGTCTTGTGTTATGCCAATGTACTGAATGACAGGACCAGTGTATCTTAGATTATGGCATGTGCCAATCGCCCTATTTTTTTTGTATCTACTAAGTTGAATGTTGGTCTGCCAATGTATGACATGACCAGTTATGACTACTAGCATCCTTTCTCATCAGTGTGTCCAGTCTTAAGACCCCTTATGCTTTCCAAAGTCCAAACGATAATGAGAGTTTCTCTGGCTTGATTTTTGAGAAGTCATAACCATCACCAGTCACAATCTATCTAATTAGAAAAAGGTAGACACTATCTGAAAAAGAGAGAAGGACACACTGAACTTCTTTTCCTTCATGAACACACCGTGCTATGCTCGTTGTTCTTCTCAATTAACTTTGTAACTGCTCACATTTGTATGCATTATCCATATTTTTTAGTTACTACAAATTTCATTCATACTAGCGTGTCTGAAGTTTTTTGTCCTGTCTACTACCTTTTGCAGCCTCCACGCACCAAGCACTGTCATGACTGTGATAAATGTGTCCTCCAATTTGATCATCATTGTGTTTGGCTTGGAACATGCATTGCTAAAAGGAACTACTGCAGATTTTGGTGAGTTCTGAATTTATATATTGTGCAGCTTAGTTTGAACATATGCTTCTCAGGTGCAGCATAATATCCTGTGTGGTGTATGTCATGCAATCTCTACATAAGCACCCGAGTGTCCTGCTTCAGTTAACATGTGTTTATTGTGAGAAATCAATTATTTGTGTGGTCATCCATCCATTATTTCTTTAGGTAGTCAATTTGTGTCTTGTCTTAATTTTTGTACTCCAAGTCTCTGTGGCAGAACTGTAGATCGAGAAAACCTGTATGAAGATACCAGGTTATAACGGTTATATGCCTTTTGCCTAATTATCAAACCATGCCCTCACACTTTCTTCATCTTGATTCTTATCAAGGATTTATTTGGCTGCAATTAACTGTGCACGGAAGCTGTGCTAAATCATTGCCATGCCTTTCCTTTAATATTGATCTAGTAGGAATTAGCAGGACTGTGTGTTCCCAGCAATTCATTCAACCTATACCTCCCATCTTCCATGGTCCAGAATTCTAGAAGTCTGATGCTTGTTATTGTGTTACATTTTCTTGAGGAGGTTGGTCAGGGATCATGTTAGTCTTAATTCTTAGGCATCCTAAATGGAAAAAAAAAAAGGAGCTAACATGCCTCATTGAAATGTACATATAACAATCTAATGTTGTTCTATTATATGACTCATCGAAAGTCTTGGCAGCTATCCTCAGGACATATTAATGTTTTTCAGGTGGTACATATTCGAACAAACAGTTTTAACTGTCTGGACTGTTGCTTTCTACATTCAGTTCTTTTATTTGGGCATCGTTGTATCCTGGTATGTATTTTACCCCTTTTAGACCCTATATGCACAAAGATTTTTCAGTTGTGCCTTTTAGTTGGTCTCCAGTTTGATTCGCCAGACATCTCATCTGAGTATATTGGTTATTTTTCATGGACAGGTGGAAGTTTGCTATTGGTATTGTACTTTTGGTAGCATTGATATTAATCCTCGTGGTCCTGCTGCCCTTGTTGATATTCCATGCGTAAGCTTCTAGTTTATATGCCTGACACCAAAATAGTTGAAGATCTGAATGTCTTATGTGTCATAAATACACAAACCAACCGTGATCCAGGGTTTACTACTTCGGTATGCACAAAGCTACTGCATGCAGGGGCGCCAGGAGGGGGGTGGGGGCTGAAATTTTGGAATGAAAAAAGTGAAAACTGAACAACTTTTGACTAAATTTGAATAATTCACAAAGAAAAACAAATGAAAAAGTGAAATTTTCGGACGAAGGGATGTGAAATTTTGGAAATTGCAAACCCTACCGTGAACCTTCTGTACAACTCTTGCTGGTTCTGGTAGTTGTATTGATGAGCTTGTTTATATGTCTGCAGTTATCTTGCTCTTACGAACCAAACAACATATGAAATTGCCAGAAGGAAGCGGATTTCTTACCTAAGGTATTAGAATGGCTGAAGATTAGCAATTATGCTTGTGTATATGTATTTGCTTGTCATTACAACACAAGTAATGAATCATTGGAATTGTGCCACTTTCAGGGAGGTTCCTAGCAGGGTTCATCCATTCAGCAAAGGCATTTGCAGAAATCTGTATGATCTTTGCATCTCTAAACAGAGGGGATTTTTTCTGGAAGCAGTGCCCCCGCTGGAGGTACTACAAGCCAGAGCTAGACCTTACACATGCCGAGATGTAATCTCCTGCCGGTGCTGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016920