BGIOSGA016922

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016922| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016922, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA016922

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016922, complete gene.

LocusTag

OSJNBB0078D11.3

Ensembl Transcript ID

BGIOSGA016922-TA

Ensembl Protein ID

BGIOSGA016922-PA

Length

2642

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26968745..26971386

Sequence Coding Region

26968745..26969909,26969994..26970157,26970875..26970937,26971135..26971386

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26968745..26971386 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26968745..26971386 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGCAAGGGGTCCAAGCTGGAGGACCAGGAGGCCGTCGCGCTGTGCCGCGGCCGCGCCGAGCTGCTGGCCGCCGCCGTGCGCCACCGGTACGCGCTCGCCGACGCGCACGGGGCGCTCGCGGACTCGCTCCACTCGATGGCCGCGCCGCTGCACCGCCTCCTCCTCCTCCAGCTCCAGGCCTCCTCGCCGCAGCTCACGCTGCCTACGGCACGCAAGGGCGGTCGTCCGCGGACCGCCGCCGCCGCCGCCACGTTGTCGCTTCCTCACGGCCGTTCGGCGCACCTCGACGACCTCGGGTCGCCGTCCGGATCCGAGACGGCCTCGCCGGCCGACTCGCCCCTCCGCGCATTCCCCGAGCAGCAGCTCCCTTACCCGCATTACGCGTACGGGTACGGGACGGGGCCCGCGTTCGCGTACCCGCCGCCTCCGGCGAGCTCCCTGCAGTTCTACTACGCGCGCAGCCGCCCTCCGCCGCCGTCGGTCGGCGTCGCGCAGCGCGCGCCGGTGTCGACGGAGCGCGTGTACTACGGCTCGTTCGACCCGACCAGCGGTTACCCGCAGTATTACGCCAACGGCGGCGTGCCGGCCACAGCCGCGCCGCAGCGGATGGCGGCTCCCGCGCCTCCTCGTTCGCCGCCAAGGGAGAGCTCCTGGGCCTTCTTGAACGTGTTCGCGAACTACGAGCCGTACGACAACTACTACTACGACTCCACAGCCGCAGCGGCCTCTGCCGCGGCGTACACGCCGAGCAGGAGCTCCCGGGAGGTGCGGGAGGAGGAGGGCATCCCGGAGCTGGAGGAGGACGAGGACGACTGCGTGTTCAAGGAGGTGGCCAGCGGCGGGTACTCGGCTGGGAGCGGCGGACACCGCAGCCGGCGCAGCTCGATTGGTAGCCTGAGCAGCGTCGCCGAGCAGGAGAACGCCGTCATTGACAATGACGTCGTAGCTAGCACCAGTGAGATATACCGGAGGCCACTGGCACACCGGAATGTCGCCATGCGCGCGCCAGCACAGGCAGCGCAGAGGGTCGCCGGCAACGGCGGCAATGTGGATGTTGCCGGGGAGATCAAGGCCCAGCTTGTTCGGGCAGCAGAAGCAACAAGGGAGCTCGCGCCATTGCTGGAGGTCGGGAAGCCGAGCTACCAAGAACACAGCCATGCTTCATCACGGCTGATGTCGTCAATCCCTGTGCCTAACTTGGGGTGCAAAGGCGTGGACTTGGTGGACATTAGAGGAGGAGGGGTAATGGTGGACTCGAAGAGCCTATCCTTGACACTGGAGAAGCTCTATTTCTGGGAGAGGAAGCTGTATGGTGAGGTCAAGTTTTATGCAATTATGACCTGCTGTAGACTGGTGCAGAAGAAGTTTGGTCCTGGATGGCGGCAGGCCGAGGAGAAAATGCGTTTACTTCTTGCCAAGAACTCTAAACGACTCAAATTATTGGACCAAAGGGGTGCTGAGGCTCATAAGATCGATGCAACAAGAAATTTGCTGAGGAAATTGTCAACAAAGATTAAAATAGCTGTCCGTGTTATTGCCAAGGTTTCAAGAAAGATAAACAAAGTGAGGGACGAGGAATTAGGGCCACAAGTTAATGCCTTGATCCAAGGGTATGTCCCCCTTTTAACTCAAGGATAG</cdnaseq>

Protein Sequence

<aaseq>MGCKGSKLEDQEAVALCRGRAELLAAAVRHRYALADAHGALADSLHSMAAPLHRLLLLQLQASSPQLTLPTARKGGRPRTAAAAATLSLPHGRSAHLDDLGSPSGSETASPADSPLRAFPEQQLPYPHYAYGYGTGPAFAYPPPPASSLQFYYARSRPPPPSVGVAQRAPVSTERVYYGSFDPTSGYPQYYANGGVPATAAPQRMAAPAPPRSPPRESSWAFLNVFANYEPYDNYYYDSTAAAASAAAYTPSRSSREVREEEGIPELEEDEDDCVFKEVASGGYSAGSGGHRSRRSSIGSLSSVAEQENAVIDNDVVASTSEIYRRPLAHRNVAMRAPAQAAQRVAGNGGNVDVAGEIKAQLVRAAEATRELAPLLEVGKPSYQEHSHASSRLMSSIPVPNLGCKGVDLVDIRGGGVMVDSKSLSLTLEKLYFWERKLYGEVKFYAIMTCCRLVQKKFGPGWRQAEEKMRLLLAKNSKRLKLLDQRGAEAHKIDATRNLLRKLSTKIKIAVRVIAKVSRKINKVRDEELGPQVNALIQGYVPLLTQG</aaseq>

Gene Sequence

<dnaseqindica>1..1165#1250..1413#2131..2193#2391..2642#ATGGGGTGCAAGGGGTCCAAGCTGGAGGACCAGGAGGCCGTCGCGCTGTGCCGCGGCCGCGCCGAGCTGCTGGCCGCCGCCGTGCGCCACCGGTACGCGCTCGCCGACGCGCACGGGGCGCTCGCGGACTCGCTCCACTCGATGGCCGCGCCGCTGCACCGCCTCCTCCTCCTCCAGCTCCAGGCCTCCTCGCCGCAGCTCACGCTGCCTACGGCACGCAAGGGCGGTCGTCCGCGGACCGCCGCCGCCGCCGCCACGTTGTCGCTTCCTCACGGCCGTTCGGCGCACCTCGACGACCTCGGGTCGCCGTCCGGATCCGAGACGGCCTCGCCGGCCGACTCGCCCCTCCGCGCATTCCCCGAGCAGCAGCTCCCTTACCCGCATTACGCGTACGGGTACGGGACGGGGCCCGCGTTCGCGTACCCGCCGCCTCCGGCGAGCTCCCTGCAGTTCTACTACGCGCGCAGCCGCCCTCCGCCGCCGTCGGTCGGCGTCGCGCAGCGCGCGCCGGTGTCGACGGAGCGCGTGTACTACGGCTCGTTCGACCCGACCAGCGGTTACCCGCAGTATTACGCCAACGGCGGCGTGCCGGCCACAGCCGCGCCGCAGCGGATGGCGGCTCCCGCGCCTCCTCGTTCGCCGCCAAGGGAGAGCTCCTGGGCCTTCTTGAACGTGTTCGCGAACTACGAGCCGTACGACAACTACTACTACGACTCCACAGCCGCAGCGGCCTCTGCCGCGGCGTACACGCCGAGCAGGAGCTCCCGGGAGGTGCGGGAGGAGGAGGGCATCCCGGAGCTGGAGGAGGACGAGGACGACTGCGTGTTCAAGGAGGTGGCCAGCGGCGGGTACTCGGCTGGGAGCGGCGGACACCGCAGCCGGCGCAGCTCGATTGGTAGCCTGAGCAGCGTCGCCGAGCAGGAGAACGCCGTCATTGACAATGACGTCGTAGCTAGCACCAGTGAGATATACCGGAGGCCACTGGCACACCGGAATGTCGCCATGCGCGCGCCAGCACAGGCAGCGCAGAGGGTCGCCGGCAACGGCGGCAATGTGGATGTTGCCGGGGAGATCAAGGCCCAGCTTGTTCGGGCAGCAGAAGCAACAAGGGAGCTCGCGCCATTGCTGGAGGTCGGGAAGCCGAGCTACCAAGAACACAGCCATGGTAAGCTACCACCTTTTCTATTCTTTTCTGTGCTGCATTATGTGCTGCATTATGTGACTTGCATTGTTAATTCTTTGGGGTTAGCTTCATCACGGCTGATGTCGTCAATCCCTGTGCCTAACTTGGGGTGCAAAGGCGTGGACTTGGTGGACATTAGAGGAGGAGGGGTAATGGTGGACTCGAAGAGCCTATCCTTGACACTGGAGAAGCTCTATTTCTGGGAGAGGAAGCTGTATGGTGAGGTCAAGGTATGCTCATCTTTGGGACATGATTTGGTGATTGATGATAATGTGCACCGAAATTAGGTGAAACCATAATGCTCGTACATATGCATTCTGTTTTGGTGTCAAACATATAGAGGTAATGCAGAACAAGTTACGACTCTGTTGCTCACAGTAGTGTCACTAGGTCCTCTGGTTTGTATCTTAAAGTTAGTTCTACGCTAGCTCTGGAACTTTGATAGTGTTTTATGTATAGTCCAAATGCCCTTCTGCTTGAACAAAAGTAACAGTATCTGAATATAGCATTGGCATCCTACTAAAGAATTTTGACCCCCAATTTCTTGAGATGTCACGCAATACATTACCTAACTTTCAGGTATCTAAAAGGTTGCAAATGCTGAAAAAAATGTGATATCCATCTGTTGCTAGTCATAGTGTTACTTGATTTGTTTTGCTGGTGGAGGAGCTTTGTTAGCATTTTCTTATTAATTGATCTTGGCATGAAAGGGTCCACTAGATTGTACCTGGTATTATGGGAATTGACTTTGCAGGCTAACGGCCAGATCTTAAGCACTCCTGTGACTAATAGCTAAAAATATAATTACTCTGTTGAGCTCCAACACCGTCTCATAGGTAGCTTGTGGAACCCAGAAAAACACATGAATATGGTTCTGAGGTACCTGTCGGTTTTGTTTCAGTGATGGGGATTTGGCATACTTTTTTCTTTTCTGTTTTGTGTCACAGTTTTATGCAATTATGACCTGCTGTAGACTGGTGCAGAAGAAGTTTGGTCCTGGATGGCGGCAGGTCCATTTAAGCGCTATGTCTAAGCTTTTCAGACCAAAATTCAGTGTAACTGGATAGTTTTGTTCCCTGGGATGCTAGGTTTATAGTTGTTGTAGAGCTGCTTCATGTGAACCAGCGTTGGCCATGTCCATGGATGTGTTCAACCCAATATCCTCTTTGCATAGTATTCTTACTGCTCTATTATATTTCTCTCGCAGGCCGAGGAGAAAATGCGTTTACTTCTTGCCAAGAACTCTAAACGACTCAAATTATTGGACCAAAGGGGTGCTGAGGCTCATAAGATCGATGCAACAAGAAATTTGCTGAGGAAATTGTCAACAAAGATTAAAATAGCTGTCCGTGTTATTGCCAAGGTTTCAAGAAAGATAAACAAAGTGAGGGACGAGGAATTAGGGCCACAAGTTAATGCCTTGATCCAAGGGTATGTCCCCCTTTTAACTCAAGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016922