Os08g0116500

From RiceWiki
Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0116500| Description = Similar to 60S acidic ribosomal protein P1 (L12)| Version = NM_001067389.1 GI:115474514 GeneID:4344516| Length = 148...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0116500

Description

Similar to 60S acidic ribosomal protein P1 (L12)

Version

NM_001067389.1 GI:115474514 GeneID:4344516

Length

1482 bp

Definition

Oryza sativa Japonica Group Os08g0116500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:903130..904611

Sequence Coding Region

903317..903385,903495..903618,904158..904243,904343..904396

Expression

GEO Profiles:Os08g0116500

Genome Context

<gbrowseImage1> name=NC_008401:903130..904611 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:903130..904611 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtccagcgaggtcgcctgcacgctcgccgccctcatcctccacgacgatggcatccccatcacctctgagaagatcgccaccctggtgaaggcggccaacatcaaggtcgaggcctactggcccggtctcttcgccaagctcctcgagcaccgcagcgtcgatgacctcatcctctccgtcggatctggtggtggtgctgctccagttgctgctgctgctgcccctgctgctggcggtggtgctgctgctgccccagctgccgaggagaagaaggaggaggcgaaggaggagagcgacgatgacatgggtttcagcttgttcgactaa</cdnaseq>

Protein Sequence

<aaseq>MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPG LFAKLLEHRSVDDLILSVGSGGGAAPVAAAAAPAAGGGAAAAPAAEEKKEEAKEESDD DMGFSLFD</aaseq>

Gene Sequence

<dnaseqindica>188..256#366..489#1029..1114#1214..1267#tagaagcccccctgcctcctgcgcctccgccgccgccgccttcttcgtctgctggtacgccgcccttcgccgccgccgcctccgcatccaatctgcgttgttcttccgccgatttcgattgcctcacccttcgttttgtttcttgattgatctcgcagagttcgtagatcagctcgagctcgccgccatgtcgtccagcgaggtcgcctgcacgctcgccgccctcatcctccacgacgatggcatccccatcaccgtgcgttactacaccttcacccctatcttgattttgcttttcttggcttggggtggatttggtgtgtgagattgattatttattttgttggtgatttggtgacgagcagtctgagaagatcgccaccctggtgaaggcggccaacatcaaggtcgaggcctactggcccggtctcttcgccaagctcctcgagcaccgcagcgtcgatgacctcatcctctccgtcggatctggtaaaacctcccggccccttgtcccctgcctccttgctatgccactgcgtgattgtcgatgtagatttgattgaacctagtttatctcatgagggaaattaccatagatttatatagggtttgtcatgaagatgtaatcctattagttggttgcttcggttaacctttgtgcaatttagtaattgtagttatacatctgttatctcatgaacattgcgattgccatcggaattatatagtttggtgtagattattacaacttagttactagttatgccgtggaattgtcttgatcatgtgttctattctaatcgtgtcaatgttgtttggaagttaaaagctgttttgagctgttgtcatgtttcatctttgccatatttaactaggaaacttgagcatgtcaattctgttaatattatgttgtgtatgagttctggttctaggattacttgtttcattctgttaataaatcgttatatacatgtttgtgatcttaaaacaaatattgtatttactttgtgcatcgattatggttgtaggtggtggtgctgctccagttgctgctgctgctgcccctgctgctggcggtggtgctgctgctgccccagctgccgaggagaagaaggtgagctatacatacaatttgcttgttatttttgtcatgacacatgtatgttttgttttgttttgtaacttacaaatgtcttggttttcctcttatcaggaggaggcgaaggaggagagcgacgatgacatgggtttcagcttgttcgactaagcagtccacagatgttagccagtccgcctatgctttgcaagactatcttatgttgtgtcttttaggttcacttaaagtactctcaagttttgagttttgatatggtgttatcgagaatctgtgtctgtgggatgagaacctcaaacctccttggatggtcctattagaatgaaaccgttctacattcttatatctagctcttttattctgtggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0116500, RefSeq:Os08g0116500