BGIOSGA016927

From RiceWiki
Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016927| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016927, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016927

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016927, complete gene.

LocusTag

OSIGBA0158F05.1

Ensembl Transcript ID

BGIOSGA016927-TA

Ensembl Protein ID

BGIOSGA016927-PA

Length

1788

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27111500..27113287

Sequence Coding Region

27111500..27111865,27112336..27112539,27112820..27113014,27113108..27113287

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27111500..27113287 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27111500..27113287 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCATCGCGGCGTGGGCATGGCAGTCCCAACCTGCGCACCGCCTGCTCCTCCTCTTCAACCGCGACGAGTACCACTCGAGGTGCGCCCCCTGCTCTGTTCCATCCATCCCCACTCCGTATAACTCTCATCTTTTGACACGAGCACGCCGCGATTTTTTGTCAAGGCCGACGCAACCGGCGGGGTGGTGGGCCGCCGGGAAGGCGGAGGTAAAGTTGATCCTTGGGGGTAGGGATGAGCTCGGCGGCGGCACGTGGCTGGGGTGCACGAGGGACGGGAAGCTGGCCTTCCTGACCAACGTCCGGGAGCCCGGCACGCTGGTCGGAGCCAAGTCCAGAGGGGAGCTCCCCGTCAGGTTCCTCCAGGGAAACCAATGTCCGTTGGAGTATGCGGAAGAAATAGCCAAGGAAGCAGATCAGTACAATGGCTTTAACCTTGTATTGGCTGATGTGCAGTCGGGAAATATGGCTTACATATCTAATAGACCTGAGGGTGATCCAGTGGTTCAGAAAGTTCTCCCTGGGTTCCATGTGCTTTCCAATGCTGCAATTGACTGCCCTTGGCCAAAGATGTTGCGCTTAGGACAAAGTTTCAACAGATTTCTTGCAACACAGGATGGTGCGGAAGTCTCTTTACAACAGATGGTTGAAGAGTTGATGATGGATCCTGTCAAGGCTGATAAATCTGCAGTGCCAGATACTGGTGTCGACCCTGACTGGGAATACCAGCTAAGCTCTATATTCATTGACACTGAGAAAGGACAGGCACGATATGGAACACGAAGCATGACTGCTCTTGCTGTGAAGTTCAACGGCGAAGTAACTTTCTATGAAAGGTACTTGGAGAGCAATCTATGGAAGGAGAATCTCATGCAATTTGAGTTGGAGATGTCACAGTGGGAGGATCTGAGAGGAACTTCAAATATTTCTCCAAAGAGTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MCIAAWAWQSQPAHRLLLLFNRDEYHSRCAPCSVPSIPTPYNSHLLTRARRDFLSRPTQPAGWWAAGKAEVKLILGGRDELGGGTWLGCTRDGKLAFLTNVREPGTLVGAKSRGELPVRFLQGNQCPLEYAEEIAKEADQYNGFNLVLADVQSGNMAYISNRPEGDPVVQKVLPGFHVLSNAAIDCPWPKMLRLGQSFNRFLATQDGAEVSLQQMVEELMMDPVKADKSAVPDTGVDPDWEYQLSSIFIDTEKGQARYGTRSMTALAVKFNGEVTFYERYLESNLWKENLMQFELEMSQWEDLRGTSNISPKSC</aaseq>

Gene Sequence

<dnaseqindica>1..366#837..1040#1321..1515#1609..1788#ATGTGCATCGCGGCGTGGGCATGGCAGTCCCAACCTGCGCACCGCCTGCTCCTCCTCTTCAACCGCGACGAGTACCACTCGAGGTGCGCCCCCTGCTCTGTTCCATCCATCCCCACTCCGTATAACTCTCATCTTTTGACACGAGCACGCCGCGATTTTTTGTCAAGGCCGACGCAACCGGCGGGGTGGTGGGCCGCCGGGAAGGCGGAGGTAAAGTTGATCCTTGGGGGTAGGGATGAGCTCGGCGGCGGCACGTGGCTGGGGTGCACGAGGGACGGGAAGCTGGCCTTCCTGACCAACGTCCGGGAGCCCGGCACGCTGGTCGGAGCCAAGTCCAGAGGGGAGCTCCCCGTCAGGTTCCTCCAGGTGACCATTCCAACTTTTTCTGCTGTTTTGGCCATGGTTTGTGTCAAGAAGCTTACGGATGCTATGAGGCGCGTGGAGCAGGATCATGTGACCGGCTAATTGTGAGATGCATCATGCATATGCTACAATTGGATGAACACATCTTGTGTTCAAACAAATATATTCATACGAGTTTATATGTGCAATTTATCAACTCCTACATAACACCATTGAGGCATGGTTGTATCTGAACATTAAGCTGCTATACAAGTACAATAATGATCCAACGTTTCATACTCATCTCCGAGGAAGGCAATATTGTTGTTAAATGTTGTGACTTTAAGAACTAGCTATCAGTTGCCAATTTGACTTGCTTCTTATGTGAGGCTGCATTACATGTTCTACAGCTCCTTCTTAGATTAGCTTCCTACAATTGATCCTTGCTTAATTATTGATAATGTTTCTTTTACTTCAATGAATCTATGATACAGGGAAACCAATGTCCGTTGGAGTATGCGGAAGAAATAGCCAAGGAAGCAGATCAGTACAATGGCTTTAACCTTGTATTGGCTGATGTGCAGTCGGGAAATATGGCTTACATATCTAATAGACCTGAGGGTGATCCAGTGGTTCAGAAAGTTCTCCCTGGGTTCCATGTGCTTTCCAATGCTGCAATTGACTGCCCTTGGCCAAAGGTAAGCAGTTCGGTTCTTTCACTAGGAGTCACATGTTTTCTTGGAATTTGCGATATACTCGAGATAAAGGTCTCCTGTGCAAGTTAAATACCATGATACTGTGTGTATAGCTAAAGGAATCAACAAGTTCATGCAAAGTCACTCCTTGCATTTGCTCGCTTCATTTATCTTAAGATACTTTATTGTTTTATGAGTAGTTTCACTTAAAGTTCTTCTAGTTTTACAATCAAAACTATATTTTGATGATTTTTTCCTTGTGCAACTCATTTTCATCCTACAGATGTTGCGCTTAGGACAAAGTTTCAACAGATTTCTTGCAACACAGGATGGTGCGGAAGTCTCTTTACAACAGATGGTTGAAGAGTTGATGATGGATCCTGTCAAGGCTGATAAATCTGCAGTGCCAGATACTGGTGTCGACCCTGACTGGGAATACCAGCTAAGCTCTATATTCATTGACACTGAGAAAGGACAGGTAAAATTAGAAGATTCAGTATTGGGTATATACTGTCCTGTTTCTTGATCCTACCAAATTAGTGACAGGTACAAAATTTCCTTCTGGTTTCAGGCACGATATGGAACACGAAGCATGACTGCTCTTGCTGTGAAGTTCAACGGCGAAGTAACTTTCTATGAAAGGTACTTGGAGAGCAATCTATGGAAGGAGAATCTCATGCAATTTGAGTTGGAGATGTCACAGTGGGAGGATCTGAGAGGAACTTCAAATATTTCTCCAAAGAGTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016927