BGIOSGA016934

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016934| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016934, complete gene.| tag = OsI_170...")
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Gene Name

BGIOSGA016934

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016934, complete gene.

LocusTag

OsI_17010

Ensembl Transcript ID

BGIOSGA016934-TA

Ensembl Protein ID

BGIOSGA016934-PA

Length

5692

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27244453..27250144

Sequence Coding Region

27244453..27244709,27245153..27245220,27246026..27246428,27248935..27250144

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27244453..27250144 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27244453..27250144 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCGAATTCATCGGCTGCAGCTGCGGCGGCGTTCTTCGGGATTAGCAGGGATGGGGACCAGCATGACCAGATTAAGCCGCTGATATCACACCAACAGCACCAGCACCAGCACCAGCAGCAGCAGCTGGCAGCGTCACTGACCGGCGTGGCAACAGCGGCGCCTACTGCGGCGTCCAGCCAAGGCGCACCGCCGGCGGCGCCACCGGCCAAGAAGAAGAGAAATCTACCAGGCAATCCATCCAACCAACCCAATGCTTCATTTAAAGCTCTGTACTGTCACCTGAAAGAAAGAGAATTAATTCAGGTGAAGAATACAGAAACAGACCCGGACGCGGAGGTGATAGCGCTGTCGCCCAAGACGCTGTTGGCAACGAACCGGTTCGTGTGCGAGGTGTGCAACAAGGGATTCCAGCGGGAGCAGAACCTGCAGCTGCACCGGCGAGGCCACAACCTGCCGTGGAAGCTGAAGCAGAAGAACCCGGCGCAGGCGCAGCGCCGCCGCGTGTACCTGTGCCCGGAGCCGACGTGCGTCCACCACGACCCGGCCCGCGCCCTCGGCGACCTCACCGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGCGCTACGCCGTCCAGTCCGACTGGAAGGCCCACTCCAAGATCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCAGGAGGGACAGCTTCATCACGCACAGGGCGTTCTGCGACGCGCTGGCGCAGGAGAGCTCCAGGCTGCCGCCGACGAGCCTCAGCAGCCTCACCAGCCACCTGTACGGCGCCAGCAACGCCGGGAACATGGCGCTCAGCCTCTCCCAGGTGGGCTCCCACCTCACCACCTCGCTCCAGGACGGCGGCGGCCACCACCACCACCCGTCCCCCGAGCTGCTCCGCCTCGGCGGCGCGGGCGGTGGCGGCGGGGCCGGCGGCGGGAGCAGCATCGCCGCGCGGCTCGACCACCTGCTGTCGCCGTCGGGCGCGTCTGCCTTCCGCCCCCCGCAGCCGGCGTTCTTCCTCAACGCCGCCGCGGCGGCGGCGGCGACTGGGCAGGATTTCGGCGACGACGCTGGCAATGGGCAGCACTCGTTCCTGCAGGCCAAGCCGTTCCATGGCCTCATGCAGCTGCCCGACCTCCAGGGCAATGGCGCCGGGGGCCCCGGCGCGCCGGGACCTAACCTCTTCAACCTCGGCTTCTTCGCCAACAACGGCAACAGCTCGGGGTCTAGCCATGAGCATGCCAGCCAGGGGCTGATGAGCAATGACCAGTTCAGCGGTGGTGCAGGCGGCGGCGGCGGTTCTGACGCGTCGGCGGCGGGGATCTTCGGCGGTAACTTCGTTGGTGGCGACCATGTTTCTCCTGCAGGGCTCTACAACGATCAAGCGGCGATGCTGCCGCAGATGTCGGCGACGGCTCTCCTCCAGAAGGCGGCGCAGATGGGCGCGACGTCGAGCGCGAACGGCCCGGGCTCCATGTTCCGTGGCTTCGTCGGCTCGTCGCCGCACATGCGGCCGGCGGCGCAGCACATGGACCAGAGCGACGCGCACCTCAACGACCTGATGAACTCCCTCGCCGGCGGCGGCGTCAACGCCGCCGCCATGTTCGGCGGCACCAACGGCGGCGGCGTCCCTGGCGCGGGGATGTTTGATCCGAGGCTGTGCGACATCGAGCACGAGGTGAAGTTCAGCCAGGGCGGCGGAGGCGGAGGCGGCGCCGGCGCCGGCACCGGCGACGGGACGCGGGACTTCCTCGGCGTCGGCGGTGGCGGCATCGTCCATGGCATGTCGACGCCGAGAGGAGACCACCACCAGAGCAGCAGCGACATGAGCTCCTTGGAGGCCGAGATGAAGTCCGCATCGTCCTTCAACGGGAGAAGGATGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MASNSSAAAAAAFFGISRDGDQHDQIKPLISHQQHQHQHQQQQLAASLTGVATAAPTAASSQGAPPAAPPAKKKRNLPGNPSNQPNASFKALYCHLKERELIQVKNTETDPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPAQAQRRRVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESSRLPPTSLSSLTSHLYGASNAGNMALSLSQVGSHLTTSLQDGGGHHHHPSPELLRLGGAGGGGGAGGGSSIAARLDHLLSPSGASAFRPPQPAFFLNAAAAAAATGQDFGDDAGNGQHSFLQAKPFHGLMQLPDLQGNGAGGPGAPGPNLFNLGFFANNGNSSGSSHEHASQGLMSNDQFSGGAGGGGGSDASAAGIFGGNFVGGDHVSPAGLYNDQAAMLPQMSATALLQKAAQMGATSSANGPGSMFRGFVGSSPHMRPAAQHMDQSDAHLNDLMNSLAGGGVNAAAMFGGTNGGGVPGAGMFDPRLCDIEHEVKFSQGGGGGGGAGAGTGDGTRDFLGVGGGGIVHGMSTPRGDHHQSSSDMSSLEAEMKSASSFNGRRMP</aaseq>

Gene Sequence

<dnaseqindica>1..257#701..768#1574..1976#4483..5692#ATGGCATCGAATTCATCGGCTGCAGCTGCGGCGGCGTTCTTCGGGATTAGCAGGGATGGGGACCAGCATGACCAGATTAAGCCGCTGATATCACACCAACAGCACCAGCACCAGCACCAGCAGCAGCAGCTGGCAGCGTCACTGACCGGCGTGGCAACAGCGGCGCCTACTGCGGCGTCCAGCCAAGGCGCACCGCCGGCGGCGCCACCGGCCAAGAAGAAGAGAAATCTACCAGGCAATCCATCCAACCAACCCAAGTACCCTTTTACGATTTCAGCCATGCATGCATACATATCTGTTCTCCGAGATCTTGTCTCGATTGATTGGAGTCTTATCATTTGGTTTCTGACAGTGAAAGCATCTTATCGATCTCACAGGCGCGCTTGATGATTTTCTTTTTCTCTCTCTATCTAGTCTCTATACTTAATTGTTGCATCTGTTCTTTGGTTTCTTGCTTCCGAAATATCATTCCTCATCAGTGCTGAATTGCCTGTTTCTTTTTTATGTAGACTGAATTTTGTGAACTGGTTCTTTGTCTTTTTGTTTTTTTACCCAGTTCGTACTTCGTCATCTATCTTTTCCTTATTCCATTTCTTCAGTCTGGAATCTGGATCCCTTCCCTACCATGCATCTAGGCGTCTACCAGTTCAATAAAAGCGAATAGACATGAACAACTTGGCTTTCATCAGTTTGCTCCTAGTGCTTCATTTAAAGCTCTGTACTGTCACCTGAAAGAAAGAGAATTAATTCAGGTGAAGAATACAGAAAGTACTCCGTCTTTCATGGTTAAACTATTCTTTTTTTTCCCTTGTCAAGGAGTATCGATCTCTTGCGTTTTAGTTAGATCAATCAGTAGTCCCAGAATTCCCAGTTCTTCCATGAGAAGTTTTAAGAGCATGGGCATAGTTCCATATATTTCGCAAGATAAAACAAAATCAGTTCATTTTTCAAGATTCCATGCATGTACATGAGCTGTTATCCTCTTCAGTAGTATAGATCAATATTCTTTTTTCTTCCCCCAATTATGAGAAGCAAATAGGAGCCATGGCACACAATCCATGTCTATTCCCTTGTTCTCTATATCTCTTCAAGCAAAGTTCTTTTTTCCTAAAATCTCATGCAAATATTCCCTTCTCCATGGTCTAGTTTGTCTCTACCTCTCAGCCCCACCAACAGAAAGAAAAAAAAAACATCTTCCCCAAATTAATCCATCATCAGTACTAGCTCCCACCACCATTAGTTAATCATGCATGCCTAACTTATAAGCAAACAAATCCAATATAGATAATTGTCGTGAGATAATTAAGACCCATACTTGTGATAATATATCCCTTCATCGCGACTACTGTTCGATATGCCTCTTTCCTAATCCACACAAAATGTTGACGACTGCCACTACCTCCATTAACTCCATGCTTGTGTGTAAATGGATGCATTGTTTAATTTCTTTGCAAAGTGTCACGCACATATACATATATCTGAAGCGAAATGTAATATACACATTGATCATCAAGGAATTAATGAGCTGATTAACTGAACTTTGTGTGTCTTGGTACTGGTTTTTGATTTTCAGCAGACCCGGACGCGGAGGTGATAGCGCTGTCGCCCAAGACGCTGTTGGCAACGAACCGGTTCGTGTGCGAGGTGTGCAACAAGGGATTCCAGCGGGAGCAGAACCTGCAGCTGCACCGGCGAGGCCACAACCTGCCGTGGAAGCTGAAGCAGAAGAACCCGGCGCAGGCGCAGCGCCGCCGCGTGTACCTGTGCCCGGAGCCGACGTGCGTCCACCACGACCCGGCCCGCGCCCTCGGCGACCTCACCGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGCGCTACGCCGTCCAGTCCGACTGGAAGGCCCACTCCAAGATCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCAGGTACCCGATCTCCCTCTCCTTCATGCTGCACTGCAAATGCTCCATATATATACATTGCCGTCGTCAGTGTGCGTCGCCATATATAGGCTTTCGCATGGCCTCTGATCGATTCATCAGATCACCTGCTTGCTGGATGTGTTCGGTGAGCGGAGTAAAGTAGTAAACAAGGGTGTGGCCGGCTACTGTTGTGTAGTGCGTTTGGTTTGTTTCTTTAGGGTTAGGGTTTTTGTTTGGGCGTGCACAGTGGGTGGCATGGCTGTTAGTTCGTTCGTGCGATCGAGCTAGTGGCCGCGTCTAGCTAAGCCTGAGGAAGGAGGAGGAAGATGCACCGGCGATGGAGAACTGCTCGCACGTGAAATGGCATTCTTATAAAAAACCATTTTTTCTTTTCTTCTCCTCTCTTTTTGTCCTTTGGCATTTGCTCACAAGACCCTCATACTTGGCTCTTCTCTCCCTTGGGAAGCTGGAACCAGCAACTCTTCTTCTCTCTCTCTCTCTCTAGCCAAAAGCTTGGTATGTGTAAGCATTCTGTTACACTGTCCTGTGGGCCCGCATTTATCATGGGCCAGCGTGTCAGTAGCAGTCCAGTTGTAAGGAGGAGCGGCAATGCAGGCCGGCTTCCTCTCTCCTGTCTACAGTTTTCTCTTCTCACTCTCTCTCTACTGAATCACTTGGCTGCCATGTAAGCCTAGCTTGTTCTCATGTGAGTTGGCTGGCTGGCTAGATGTGGCAGAACCGTTCTTTGGCCGTGGCAGTGAGCCAGGCTTGGCCAGGGGCCACGCACCTTTTCATGGATTCGTTGCAAACGCCCGGCCCTCACATATATCTCATCACTCATCAGGCACCAACTAGGTGTAACTTTTAGGAACTCTTCATTTATTGATGGAATTAAACAGGCGTGTTCAATGCTGGCTAGTGGTCACTCCTACTTCTTCTTTCATGAGTTTGGCAAAAAATTCTCCAATAGGGAGTTGACACATTTAGAATTAGAGTATCAACAGGAGTTGCATTGATGAGCCTTCGTGTTGAGTTTGTTCACTGTTTCTGCAAAAAGGAATCCATTCATGCATGTGTGTGAGTGATTTTGGGTTCCTGAAAAGGAGCACAGGAATTCTAGGCTCATGTAGAGTTTTTTGTTGTTAGTGTATGACCTACTTTAGCATTCTTTTTTCCTAGTAGGAGTAGTAATTGTTTTGTGAAAACTATGGTCATTTCGGACAGGTGAATGAGCTCTACTTTAGCAATCTTTTTCCTAGGAGTAGTAATTGTTTTGTGAGAACTATGGTAATTTCGGACAGGTGAATGAGCTCGATCATATATAGCATTTCAAGTGGAATTGATGGACCCCTTGCTATATAGGAGTATAATTTTTTTAGGGATCTTTTAATACCTTGCATCTATACCCTCTCATCTTCAGATTCTAATAAAATTTCTGGGTGGGGCGCAACCAAGCACTGGTTTGAACCATTTGTTCAATTTCATATCACAGCTCAATTTTTTTTATGTTCATATGATTTTCAACTGCAATCGTATCAGTCCTCAAGCTTTTTCTTTTTCCTTGTGTGTTGGTTTCTAGGGAAGTGAGCTTACCAGCCCACTAAGTTTTCTGATCTCCTTGGTGTGTGTGTTGGTGTGCATGACAACGTCTGATGTCTTTGTCTTCCTGGCTTAAAACAGTTTCCCCTTCCTGGCTTTCTCTTTTGAAGCTTCCTACTAGTGGGAACCTATGAGCGGCACATCACGGCAAGCTAGGATGAGATTTACCTCCTTTTTTACGCTCCCTTTGATTGACATGGGTTTCTGGGATCTTGGGCTAGCTTTTGTGCGTGGGTTGCATACCTCTCTGCATGCATGGATACCTAACACCCTTGACAAAAAGTGGTACTAGTTCGTTCTTCTCCTTTTTGAACAAACAAGTATGAATTGTCAAACCCTATCCTTTACTAGTAGTAGCATCATTAATGATTTCAGGAAGTAATATGACATCTTTTTTTAACTTAGATAATGTGAGTTAATAATTTGACGTGGTGTGGAACATTTTTAATTACCAGTAGCTACAGAAAGGGGGGAATGCATGCACAGCCCTGTAGAAAGTAAAGTTACTGTTCAGGTTCATGAAAACAACAGCTGCAAACACAACATTCAGCGGCACAGGCTCGCAGCGCCCAGTTGCAGCAGTGCAGCGCTCACATGCTGACCAGAAAACAATAACTTAACCCGAGATGCCGCTCCTCCTCCTCCTCCTCCTCGGTGTGCGCGCCGCCCATGCACGGCCGTCTCTTGCAAGCTGCGGCTGCAGCTGCTACTGCTAGCACCTCTCACATCAACTTTTTACTGTTCACTTTTACTGCACACTCGAGAGCTCGTTGTCATGCATGGCAATGTCACGGCATGCAGAGGTCGAGTAGAGGGATCACTGGATCAAGTTGCACTCTAACCTAAGATTTCTTTTCTTTTTGTTTTGTTTTGCTGAATGCTTGTGTACTCGTGTCCATGGCGCGTGCAGGAGGGACAGCTTCATCACGCACAGGGCGTTCTGCGACGCGCTGGCGCAGGAGAGCTCCAGGCTGCCGCCGACGAGCCTCAGCAGCCTCACCAGCCACCTGTACGGCGCCAGCAACGCCGGGAACATGGCGCTCAGCCTCTCCCAGGTGGGCTCCCACCTCACCACCTCGCTCCAGGACGGCGGCGGCCACCACCACCACCCGTCCCCCGAGCTGCTCCGCCTCGGCGGCGCGGGCGGTGGCGGCGGGGCCGGCGGCGGGAGCAGCATCGCCGCGCGGCTCGACCACCTGCTGTCGCCGTCGGGCGCGTCTGCCTTCCGCCCCCCGCAGCCGGCGTTCTTCCTCAACGCCGCCGCGGCGGCGGCGGCGACTGGGCAGGATTTCGGCGACGACGCTGGCAATGGGCAGCACTCGTTCCTGCAGGCCAAGCCGTTCCATGGCCTCATGCAGCTGCCCGACCTCCAGGGCAATGGCGCCGGGGGCCCCGGCGCGCCGGGACCTAACCTCTTCAACCTCGGCTTCTTCGCCAACAACGGCAACAGCTCGGGGTCTAGCCATGAGCATGCCAGCCAGGGGCTGATGAGCAATGACCAGTTCAGCGGTGGTGCAGGCGGCGGCGGCGGTTCTGACGCGTCGGCGGCGGGGATCTTCGGCGGTAACTTCGTTGGTGGCGACCATGTTTCTCCTGCAGGGCTCTACAACGATCAAGCGGCGATGCTGCCGCAGATGTCGGCGACGGCTCTCCTCCAGAAGGCGGCGCAGATGGGCGCGACGTCGAGCGCGAACGGCCCGGGCTCCATGTTCCGTGGCTTCGTCGGCTCGTCGCCGCACATGCGGCCGGCGGCGCAGCACATGGACCAGAGCGACGCGCACCTCAACGACCTGATGAACTCCCTCGCCGGCGGCGGCGTCAACGCCGCCGCCATGTTCGGCGGCACCAACGGCGGCGGCGTCCCTGGCGCGGGGATGTTTGATCCGAGGCTGTGCGACATCGAGCACGAGGTGAAGTTCAGCCAGGGCGGCGGAGGCGGAGGCGGCGCCGGCGCCGGCACCGGCGACGGGACGCGGGACTTCCTCGGCGTCGGCGGTGGCGGCATCGTCCATGGCATGTCGACGCCGAGAGGAGACCACCACCAGAGCAGCAGCGACATGAGCTCCTTGGAGGCCGAGATGAAGTCCGCATCGTCCTTCAACGGGAGAAGGATGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016934