BGIOSGA016939

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016939| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016939, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016939

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016939, complete gene.

LocusTag

OSIGBA0139P06.1

Ensembl Transcript ID

BGIOSGA016939-TA

Ensembl Protein ID

BGIOSGA016939-PA

Length

2650

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27409927..27412576

Sequence Coding Region

27409927..27410910,27411017..27411107,27411195..27411352,27411447..27411498,27411611..27411690
,27411794..27411887,27411984..27412576

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27409927..27412576 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27409927..27412576 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTGGAGGAAGAGGCGTTCTTTGACACGCGGGAGGAGCTGCTGCCGCCGTCGCCGGCGGCGGCATTGCCGTGGTCGGGTGGGCTCGACAGCGTGCGGCAGCGGAGGGAGCGGTTCATGCGAAGCATGGGCCTGGAGCGCAGCCCGAGCCTCCGCCAGGCGGATTTCGCGGACGTCGTGGGCGATGTGGAGGAGGAGGGTGAGGTGGCGGCGGAGGCGGCGGCGGCGGAGATCGGGAGGTGGTCGTCGCAGTCGGACGAGAACGAGTGCTCCATGTCGAGCTGGTCGACGGAGGAGACGACGAGCTACGACGACGGCGCGTCGGATGACAACTCCGTGAGTGGATCCGGCAAGGCGAGCAGGAGCTTCAGCTCGCTGTCGTTCATCCAGAGGCTCATGAGCCGCAATGGCAAGCCTTCTGGTGCTCCGAAGACGATCGACAGGAGGAGAAATGGGTGGCTCCGGAGGCTGGGCGTCAGTGCTTGTGTTGTGGATAGTGGGGCAGCAGATGAAGCCAGCACCAGTTCTTCAGATAGTGAGCAAATTGAGGCTGGGAGGTATGAAAGAATCAAGGTTCACTCTTACCGGAAGCGGTCGAAGGAATTGTCCGCCGTGTATCAGGGGCAAGTGATCAAAGCACATGATGGTGCCATCCTGACGATGAAGTTTAGTCCTGATGGGCAGCTTCTTGCAACCGGTGGAGAAGATGGAGTTGTCAGGGTTTGGGCTGTCATGCAGTCCGAGGACTGCAAAATTCCACTGGATGATCCTTCTTGCGTCTACCTAAAAGCGCGGCGCAAGTATGGGCTTGCTCCTGTGAATGCCGAGAGCGAGAAGAAATCAAAGATCAATGGCCTGAAAAAATCCGATTCTGCTTGTATTGTGGTTCCAACGATGGTTTTCCAGATCTCAGAGGAACCAGTGCATGAGTTCCGTGGGCACTCTGGTGATGTGCTTGATTTGTCATGGTCGAGCAATAAGCATCTACTGTCAGCATCAACAGACAAAACTGTTCGCATGTGGGAAATTGGATATGCAAACTGCATCAGAGTTTATCCACATAGCAACTTTGTGACTTGTGTCCAATTTAATCTAGCTGACGAGAATCTCTTCATTAGTGGATCAATTGATGGCAAAATTCGTGTTTGGGACATTACTAGAAGCAGTGTTGTGGACTGGGTGGATATTAGAGACATAGTAACAGCAGTTTGTTACCGGCCTGGTGGAAAGGGAGTGGTGGTTGGTACTATTACTGGAAATTGTCGCTTCTATGAAATATCTGACAATCTGCTGAAGCTAGAAACACAAATTGCTCTCAATGGAAAGAAGAAATCATCTCTCAAAAGAATCACAGGCTTTCAGTTTTGCCCAAGCAACCCAAGTAAACTAATGGTGACATCTGCCGATTCGAAGATCAGAATACTTGATGGGACCAATGTGATTCAGAATTATAGTGGACTCCGAAGTGGTTCTTGCCAGTTGTCAGCAACATTCACTCCAGAAGGGCAGCACATAATTTCTGCCAGTGAAGACTCCAACGTTTATGTTTGGAGCCATGAAAACCAGTATGAGTGTGCATGCAAACAAGCAAAAACCACACAGACATCTGAGCATTTCCGGTCCAACAATGCAGCCATTGCAATACCATGGAATGGCACAAAACCAAGAAGCCCAGTTCCGTTGTCGTCCCAAATTTTACCACCACAAGGAGATACTTTCTGGTCAATGAGCAAGGCTATCAAATACAATTCAAGCCTCTGTGGAAAGGATTCTTCCATTAAAAAAATTGTGTCAACGCCTGCTGCTCCTGGTATTTTCAATCTGAACCAGGAGTTCTTCATTGAGTCCTCTTGCAAAAGTTCAGCAACTTGGCCAGAGGAAATGCTACCATCTACCACAGCCAGTGTAAATTTGGATGAGTCACAGTTCAAGCTCTTAAGGAACTGTTTCCAAGGAACATCAAACTCCTGGGGTCAAGTGATAGTTACTGCAGGATGGGATGGCAGGATTAGGTATTTCCAGAATTTCGGTTTACCAGTGCATCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MEVEEEAFFDTREELLPPSPAAALPWSGGLDSVRQRRERFMRSMGLERSPSLRQADFADVVGDVEEEGEVAAEAAAAEIGRWSSQSDENECSMSSWSTEETTSYDDGASDDNSVSGSGKASRSFSSLSFIQRLMSRNGKPSGAPKTIDRRRNGWLRRLGVSACVVDSGAADEASTSSSDSEQIEAGRYERIKVHSYRKRSKELSAVYQGQVIKAHDGAILTMKFSPDGQLLATGGEDGVVRVWAVMQSEDCKIPLDDPSCVYLKARRKYGLAPVNAESEKKSKINGLKKSDSACIVVPTMVFQISEEPVHEFRGHSGDVLDLSWSSNKHLLSASTDKTVRMWEIGYANCIRVYPHSNFVTCVQFNLADENLFISGSIDGKIRVWDITRSSVVDWVDIRDIVTAVCYRPGGKGVVVGTITGNCRFYEISDNLLKLETQIALNGKKKSSLKRITGFQFCPSNPSKLMVTSADSKIRILDGTNVIQNYSGLRSGSCQLSATFTPEGQHIISASEDSNVYVWSHENQYECACKQAKTTQTSEHFRSNNAAIAIPWNGTKPRSPVPLSSQILPPQGDTFWSMSKAIKYNSSLCGKDSSIKKIVSTPAAPGIFNLNQEFFIESSCKSSATWPEEMLPSTTASVNLDESQFKLLRNCFQGTSNSWGQVIVTAGWDGRIRYFQNFGLPVHQ</aaseq>

Gene Sequence

<dnaseqindica>1..984#1091..1181#1269..1426#1521..1572#1685..1764#1868..1961#2058..2650#ATGGAGGTGGAGGAAGAGGCGTTCTTTGACACGCGGGAGGAGCTGCTGCCGCCGTCGCCGGCGGCGGCATTGCCGTGGTCGGGTGGGCTCGACAGCGTGCGGCAGCGGAGGGAGCGGTTCATGCGAAGCATGGGCCTGGAGCGCAGCCCGAGCCTCCGCCAGGCGGATTTCGCGGACGTCGTGGGCGATGTGGAGGAGGAGGGTGAGGTGGCGGCGGAGGCGGCGGCGGCGGAGATCGGGAGGTGGTCGTCGCAGTCGGACGAGAACGAGTGCTCCATGTCGAGCTGGTCGACGGAGGAGACGACGAGCTACGACGACGGCGCGTCGGATGACAACTCCGTGAGTGGATCCGGCAAGGCGAGCAGGAGCTTCAGCTCGCTGTCGTTCATCCAGAGGCTCATGAGCCGCAATGGCAAGCCTTCTGGTGCTCCGAAGACGATCGACAGGAGGAGAAATGGGTGGCTCCGGAGGCTGGGCGTCAGTGCTTGTGTTGTGGATAGTGGGGCAGCAGATGAAGCCAGCACCAGTTCTTCAGATAGTGAGCAAATTGAGGCTGGGAGGTATGAAAGAATCAAGGTTCACTCTTACCGGAAGCGGTCGAAGGAATTGTCCGCCGTGTATCAGGGGCAAGTGATCAAAGCACATGATGGTGCCATCCTGACGATGAAGTTTAGTCCTGATGGGCAGCTTCTTGCAACCGGTGGAGAAGATGGAGTTGTCAGGGTTTGGGCTGTCATGCAGTCCGAGGACTGCAAAATTCCACTGGATGATCCTTCTTGCGTCTACCTAAAAGCGCGGCGCAAGTATGGGCTTGCTCCTGTGAATGCCGAGAGCGAGAAGAAATCAAAGATCAATGGCCTGAAAAAATCCGATTCTGCTTGTATTGTGGTTCCAACGATGGTTTTCCAGATCTCAGAGGAACCAGTGCATGAGTTCCGTGGGCACTCTGGTGATGTGCTTGATTTGTCATGGTCGAGCAATAAGGTTAGTTAATGAAATGCTCTTTTGTCCATGTATTGGCATTGTTCCTTTGCGTTTTTCCTTATGCAGTACTTTTTGGTTCTGATAATTAATATTTGCTACTTTACAGCATCTACTGTCAGCATCAACAGACAAAACTGTTCGCATGTGGGAAATTGGATATGCAAACTGCATCAGAGTTTATCCACATAGCAACTTTGGTAGGTTTATGTGATCCTACTTAGCTGCCTCAAAGGTCTTCACTTTCATCTATAAATTTGAGCTAACTTTTTTTTCTTGTTTTACAGTGACTTGTGTCCAATTTAATCTAGCTGACGAGAATCTCTTCATTAGTGGATCAATTGATGGCAAAATTCGTGTTTGGGACATTACTAGAAGCAGTGTTGTGGACTGGGTGGATATTAGAGACATAGTAACAGCAGTTTGTTACCGGCCTGGTGGAAAGGTATGATTATCAGCGGCCATCTTAGCTGTTTTGACTAACTTGCTGCGTCAGTAATTTGTGATACTGATGTCCTTTCTTTTCGAATATCTTGCAGGGAGTGGTGGTTGGTACTATTACTGGAAATTGTCGCTTCTATGAAATATCTGGTTAGTACTAAACACTAAATTGCCAAATGATTATTAGCTTTAAAATATATTTTTGATAGGCAGAATACGTGTTTATACTTATGCTTATTTCATCTGTTTTGCATTGGATCAGACAATCTGCTGAAGCTAGAAACACAAATTGCTCTCAATGGAAAGAAGAAATCATCTCTCAAAAGAATCACAGGCTTTCAGGTAACATCTTGGGCAAGGAAGAGGCATGCTGTAATCAATAAATTCATCAGTCCTTTTTCACTAGAAATCCTTCCGACTCTTTTTTTCCTCATTCCCATTGCAGTTTTGCCCAAGCAACCCAAGTAAACTAATGGTGACATCTGCCGATTCGAAGATCAGAATACTTGATGGGACCAATGTGATTCAGAATTATAGTGGTACACCCAAATACTCGTTTATTATTTCTGCTCTATCTAGTCATTTCCTGGGAATTCGGATGGATAATTTTTTTTTTATTTTTGCTAATCTATCAGGACTCCGAAGTGGTTCTTGCCAGTTGTCAGCAACATTCACTCCAGAAGGGCAGCACATAATTTCTGCCAGTGAAGACTCCAACGTTTATGTTTGGAGCCATGAAAACCAGTATGAGTGTGCATGCAAACAAGCAAAAACCACACAGACATCTGAGCATTTCCGGTCCAACAATGCAGCCATTGCAATACCATGGAATGGCACAAAACCAAGAAGCCCAGTTCCGTTGTCGTCCCAAATTTTACCACCACAAGGAGATACTTTCTGGTCAATGAGCAAGGCTATCAAATACAATTCAAGCCTCTGTGGAAAGGATTCTTCCATTAAAAAAATTGTGTCAACGCCTGCTGCTCCTGGTATTTTCAATCTGAACCAGGAGTTCTTCATTGAGTCCTCTTGCAAAAGTTCAGCAACTTGGCCAGAGGAAATGCTACCATCTACCACAGCCAGTGTAAATTTGGATGAGTCACAGTTCAAGCTCTTAAGGAACTGTTTCCAAGGAACATCAAACTCCTGGGGTCAAGTGATAGTTACTGCAGGATGGGATGGCAGGATTAGGTATTTCCAGAATTTCGGTTTACCAGTGCATCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016939

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016939&oldid=65833"