BGIOSGA016957

From RiceWiki
Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016957| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016957, complete gene.| tag = OSRPT2B...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016957

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016957, complete gene.

LocusTag

OSRPT2B

Ensembl Transcript ID

BGIOSGA016957-TA

Ensembl Protein ID

BGIOSGA016957-PA

Length

3954

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27707386..27711339

Sequence Coding Region

27707386..27707874,27709917..27710162,27710327..27710713,27710806..27710946,27711256..27711339

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27707386..27711339 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27707386..27711339 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCAGGGCACCCCGGGAGGCATGGGCAAGCAGGGCGGCGCCCCCGGCGACCGCAAGCCTGGCGGCGACGGCGACAAGAAGGACCGCAAGTTCGAGCCCCCCGCCGCCCCCTCCCGCGTCGGCCGCAAGCAGCGCAAGCAGAAGGGCCCCGAGGCGGCCGCTCGCCTCCCCAACGTCGCCCCTCTCTCCAAGTGCCGCCTCCGCCTCCTCAAGCTTGAGCGGGTCAAGGACTACCTCCTCATGGAGGAGGAGTTCGTCGCCGCCCAGGAGCGCCTCCGCCCCACCGAGGACAAGACCGAGGAGGACCGATCCAAGGTCGACGACCTCCGCGGTACCCCCATGAGCGTCGGATCCCTCGAGGAGATCATCGACGAGAGCCATGCCATCGTCTCCTCCTCCGTCGGCCCCGAGTACTACGTCGGCATCCTCTCCTTCGTCGACAAGGACCAGCTCGAGCCCGGCTGCTCCATCCTCATGCACAACAAGGTTCTGTCTGTGGTCGGAATTTTGCAAGATGAAGTTGATCCTATGGTTTCTGTGATGAAAGTTGAGAAAGCTCCGCTGGAATCCTATGCTGACATTGGTGGGCTAGATGCTCAGATCCAAGAAATCAAAGAGGCAGTTGAGCTTCCCTTGACCCATCCTGAGCTATATGAAGACATTGGCATCAGGCCACCCAAGGGAGTCATATTATACGGAGAACCTGGAACAGGGAAGACACTACTTGCCAAGGCTGTTGCTAACTCCACATCTGCAACTTTCTTGCGTGTTGTTGGAAGTGAGCTTATTCAAAAGTATCTTGGTGATGGTCCCAAACTAGTCAGGGAACTGTTCAGAGTTGCTGATGAGCTTTCTCCCTCAATAGTCTTTATCGATGAGATTGATGCTGTTGGAACAAAGAGGTACGATGCTCATTCAGGAGGGGAGCGTGAGATTCAGAGAACTATGTTGGAGCTTCTTAACCAGTTAGATGGTTTTGACTCTCGTGGTGATGTCAAAGTTATACTAGCAACAAATCGCATCGAAAGTCTTGATCCAGCATTGCTACGCCCTGGTCGCATAGATCGGAAGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGA</cdnaseq>

Protein Sequence

<aaseq>MGQGTPGGMGKQGGAPGDRKPGGDGDKKDRKFEPPAAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLLKLERVKDYLLMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEKVMFKKKEGVPEGLYM</aaseq>

Gene Sequence

<dnaseqindica>1..489#2532..2777#2942..3328#3421..3561#3871..3954#ATGGGGCAGGGCACCCCGGGAGGCATGGGCAAGCAGGGCGGCGCCCCCGGCGACCGCAAGCCTGGCGGCGACGGCGACAAGAAGGACCGCAAGTTCGAGCCCCCCGCCGCCCCCTCCCGCGTCGGCCGCAAGCAGCGCAAGCAGAAGGGCCCCGAGGCGGCCGCTCGCCTCCCCAACGTCGCCCCTCTCTCCAAGTGCCGCCTCCGCCTCCTCAAGCTTGAGCGGGTCAAGGACTACCTCCTCATGGAGGAGGAGTTCGTCGCCGCCCAGGAGCGCCTCCGCCCCACCGAGGACAAGACCGAGGAGGACCGATCCAAGGTCGACGACCTCCGCGGTACCCCCATGAGCGTCGGATCCCTCGAGGAGATCATCGACGAGAGCCATGCCATCGTCTCCTCCTCCGTCGGCCCCGAGTACTACGTCGGCATCCTCTCCTTCGTCGACAAGGACCAGCTCGAGCCCGGCTGCTCCATCCTCATGCACAACAAGGTACTACTGCTCACCCCCCATCGCTTTCCGCATCGATCTACTTCGGTTCATACACATACTTTAGGCCGGCCTCTTCCACATAATCAAAAGTATTAAGATCTATCTATCCCCATTAGTTGCCTACAATTGGGGATTTGCGTTCAAATCAGGTGGATTTCACTTGCTCAAAATTTGGACATATATAAACTTCTGAAACACCTGATTTTCCGGACTATAAGCATAACGACAACATACGGAATTGGGGATTTTATATTTTATATTGTTGAACTGATAATTCATTCAGTAGAACATCATACTATATGTTTTATTATGGATCTGGGATGTGATTGAATTGAGTTTTTCTGCGATTTATACGGCATGGGCGTAGGAAGACTGAAAGGTTAAATGATTTTCTTCTTTTTTTTAAATAAAAAAAGTTCCAGGAGAACTGATCATGAGTGATTACAAGATGATGATACAAACACCATTTGTCTCACTGGTCACTGCCCAAATTTCTTGTTTTTTTTTTGTTTGGCAATTTGTTTTCATGAACCAGATGGCTGTCAGATGCCAATGCTTGTATAAGGCTGCTTTTCAGGTGTAAACAAACATCCTCTTGTTTCTACGACGTGTTTGCAGTCTCCTATTCTGCTGCCTGTCTCTTAGGCTAGTCTATGCTATATGATATATCGATGAGCCATGTAGAAGGCTGAGCTAGTTTCAACTGTAGAACATTGAACCACCTTAATGTCCTTTCATTAAAGGTTTCTTCGATACCCAGTTGTTTCACACAGTGAAGAACCACAGAGCATTAAGATCCCTCCCCATTTGGTTGATTGGTATTGAGGATAATTTCTGCTCAGACCAGGTGGATTTGGCTTTCATTTGGTCTAATCTAAATTGATCGAATCTGTGGCTAAACTAAACTTAAATCTTATCAGTTATCATGCTGTCCTTCTGAAAATTTGTACACCCAATTTTCACAAAAACCTTACACTTGCACATATGAACTTCTGTAAACTTTGATACATGATTTTTCACACTAGAAGCATAGCAAGGACATGGGGATTGGGGTTTTGATTGTTTATATCGTTGAGCTGATAATTCAGTACAGCATCATACTCCCTCCGTCCCATAAAAAAATCAACTCCTAGCATCCCGAGGTGGAATTAGTGGAGATGGAGAATGACTAAAATGCCCTTAATCATTGGAAAAAGTAGTAAGAGTGATAGGTAGGTAAAGGGTATTAAAGGGATAAAACTTCTCGTTTTAAAATGAGCTGAGGGTAGGTAGAATGATAAAAGTTGGTTTTTTGTGGGGCAAAATTCGAACTCTAGAAGTTGAGTTATTTTGGGACGGAGGGTGTATCTGTTTTGTTCTGGAACTAGAATGTGACTGAAAGTCATGTGTTTCTGGCATTCTGTGATTTGTTTGGCACTGCCTGTAGGAAGACTGAAAGATTAAGGCTTTTCCTTTTTGAAATCCGGGAGAACTGATTATGAATTATGACAAGGTGATAATCCAAACACCAGATATCTCACTGCCCAAACTTGTTCTTTTTGGGGGGCAACTGTTGTGTTATGAACCTGATGATTGTCATACAAATGCATCTATATGGGTATATTTTGGGTGCAAAGCAACCTTCTGCTGTTTCTATGATGCCTTTGAAGTATATTATTCTTCTGCTTCTATCTTAGGCTAGATGTGTTATGATATTTTGAGGAGCAATACAGAAAGCTACTTTTCAACTATAGAACATTAAACCATCTTAATACTATGCTGTGATTATACTTCCTCCGTTTCATATTATAAGACTTTCTAGCATTGCCCACATTAATATATATTAATGAATCTAGACATATATGTGTGCCTAGATTCATTAACATCTATATGAATGTGGGCAATGCTAAAAAGTCTTATAACCTGAAACGGAGGTAGTATTATACATTTCCATATATATGAATATCATTTTCTTATGATCGAATAAGTGACTCAACCGTACATCCATGTGGCTAGTAATTTTAATGCTCTAGCAAGCTTGCTCACTAAATCCCTATTTCCAGGTTCTGTCTGTGGTCGGAATTTTGCAAGATGAAGTTGATCCTATGGTTTCTGTGATGAAAGTTGAGAAAGCTCCGCTGGAATCCTATGCTGACATTGGTGGGCTAGATGCTCAGATCCAAGAAATCAAAGAGGCAGTTGAGCTTCCCTTGACCCATCCTGAGCTATATGAAGACATTGGCATCAGGCCACCCAAGGGAGTCATATTATACGGAGAACCTGGAACAGGGAAGACACTACTTGCCAAGGTTAGTGTTCTGGTTTGCGTATTGGGAGTCAATATAGCTTATGGCAGTAATGCAGGCTTCAGCCCTCCATTTATGGCTTGTAATAATTAAGCAAAGCATTGCAATATTTGTCATTCTGTACCTCTCAGTTCTCTGACCACTGATTACTTGCATTGTTGTTGCAGGCTGTTGCTAACTCCACATCTGCAACTTTCTTGCGTGTTGTTGGAAGTGAGCTTATTCAAAAGTATCTTGGTGATGGTCCCAAACTAGTCAGGGAACTGTTCAGAGTTGCTGATGAGCTTTCTCCCTCAATAGTCTTTATCGATGAGATTGATGCTGTTGGAACAAAGAGGTACGATGCTCATTCAGGAGGGGAGCGTGAGATTCAGAGAACTATGTTGGAGCTTCTTAACCAGTTAGATGGTTTTGACTCTCGTGGTGATGTCAAAGTTATACTAGCAACAAATCGCATCGAAAGTCTTGATCCAGCATTGCTACGCCCTGGTCGCATAGATCGGAAGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGGTAAATATCCATTAGTATCTTTTAGAACTTCAGAATGCATGATAACTGATAAGCAGTTCCTTTGGTTCTCATGAATGTTGTGAATCGTGCAGATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGGTATGAGTGAACCTTTTTGTCTCTAATTGAAATAATCAAACCTTTTATGAGAGCCCAATTTAGACCGTTTTGTCTACTGACCTATATACCAAACAATGTCATTTTTAGTTTTTCTATATGAGTATGTGATACAGTCATACAGATAACTAGATTTTTATTTCATTATCAGCTCGACCTTTCAGCGAGATCATTATGTTTTGCTCTGAGCTTTTATAATGTGCTCGCTCATTGATTATGTCTGGAAGAAACAATTTGCATGGTCCTCACTTCCACATTCTTACCGTGGTGTGCTGTTTTATGATTTCACAGGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016957