BGIOSGA016965

From RiceWiki
Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016965| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016965, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016965

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016965, complete gene.

LocusTag

OSJNBA0020J04.6

Ensembl Transcript ID

BGIOSGA016965-TA

Ensembl Protein ID

BGIOSGA016965-PA

Length

3012

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27860846..27863857

Sequence Coding Region

27860846..27861102,27861183..27861275,27861370..27861558,27861643..27861780,27862520..27862745
,27863420..27863612,27863697..27863857

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27860846..27863857 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27860846..27863857 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAACTAACCCTAATCTCGATCTCGACGGCGAGGGCGGCGCCGGCGCCGGCGCCTCGTCGGGCCGTTCTTTGCTGCCGAAAGGAAGTGGTAGGTTCCGCCGCTCGTCGGCCCGTTGTTCACTGCCGAAAGGGAGTGATAGGTTCCGCCGCTCACTATCGCCGGTGAATTCGCGGTCGCTCCTAGAAGGACGGGATGTGCGGGACGCTGTTTTCCCCAACAAACTCTTCGATAAAGCCTTCGGCCAGCCTCTTCCAGCGCCCGTAACGCCGTCTCTGGTACCATCGCCCGCTTACATCGTGCGCCCCAACCTGCCGACCCCGTCCGAGCCACACGGATTGAATTTCAATGCCCCACTTGTTGGCGATGGGAAGATGCAAATGGATGTGGAGGGTGCCCCACTTGTTGGCGATGGGAAGATGCATATGGTTGTGGAGAGTACCCCACTTGTTGGCGATGGCAAGATGCATATGGTTGTGGAGGAGGAAATGACAACAGCTCTGGCTGTTCATCAGCCTTCAAGTCAGAGAAGTCAGAGGATCATAGTGATTGAGATGATGGCAGATGTTGGCTCACCTTCCTCTCCTGGCTCCCCCTACTCCCCTAGTTCCCCTTCTTCTCATCGAGACGCTCCCTCGGTCCGCTTCTCCTCTCGAGGCATCCGTAACCATAAGATGCCTCAGTGTGATATAGACGGATCAGACACTGAAGAAGATCTATATTCATCGTGTGAGGAGGATCCCTACTTCAATAGCCTTGTGGATGATTTCATCAGTGCAGCTACCAGCACTGATCTACTTGCATCATCACCTGAAATTGACTATATGGCAGCTAATCAAAGTCAATCTCTTTTCTATGCTGAAAGTGCATTAAAACATTATAACAACAATGATGAGAACAAGATAAAGTATGAGTTAATCAGTGCCATTACAAGCAATGCAATTATAGACCGGAGTGGTTATGGTCATGTAAACTTTGTTGCAAAAGGGGATCTACCTGATTCAGTGGATGAGTTCTTTTTCGCAGAAGTACGTTGGGACATTGATTCTTATGTGCCAGTTTGCATGGTCTCCTTAGAAGGGAAGGAAAAATCTGGTGGTTACCGTGACATTGAAGTCGACTATCCAAGAGGAGGTTTTGTGGGTGTTCCCGTCGATAAGAATCATTGCTATGCTTGTGGCGATGGACTCAAGCATCCAGAGGATGGAACATTATATGAGAGTGGTCATATCGCTTCCGGCAGTTATTATGACTAG</cdnaseq>

Protein Sequence

<aaseq>METNPNLDLDGEGGAGAGASSGRSLLPKGSGRFRRSSARCSLPKGSDRFRRSLSPVNSRSLLEGRDVRDAVFPNKLFDKAFGQPLPAPVTPSLVPSPAYIVRPNLPTPSEPHGLNFNAPLVGDGKMQMDVEGAPLVGDGKMHMVVESTPLVGDGKMHMVVEEEMTTALAVHQPSSQRSQRIIVIEMMADVGSPSSPGSPYSPSSPSSHRDAPSVRFSSRGIRNHKMPQCDIDGSDTEEDLYSSCEEDPYFNSLVDDFISAATSTDLLASSPEIDYMAANQSQSLFYAESALKHYNNNDENKIKYELISAITSNAIIDRSGYGHVNFVAKGDLPDSVDEFFFAEVRWDIDSYVPVCMVSLEGKEKSGGYRDIEVDYPRGGFVGVPVDKNHCYACGDGLKHPEDGTLYESGHIASGSYYD</aaseq>

Gene Sequence

<dnaseqindica>1..257#338..430#525..713#798..935#1675..1900#2575..2767#2852..3012#ATGGAAACTAACCCTAATCTCGATCTCGACGGCGAGGGCGGCGCCGGCGCCGGCGCCTCGTCGGGCCGTTCTTTGCTGCCGAAAGGAAGTGGTAGGTTCCGCCGCTCGTCGGCCCGTTGTTCACTGCCGAAAGGGAGTGATAGGTTCCGCCGCTCACTATCGCCGGTGAATTCGCGGTCGCTCCTAGAAGGACGGGATGTGCGGGACGCTGTTTTCCCCAACAAACTCTTCGATAAAGCCTTCGGCCAGCCTCTTCCGTAAGTTCATTCATGTCCTCCCTCTCCACACCCATGAGGCCATGAGCATGACTTAACCTAAGAATCGATTGCTGCCGCAGAGCGCCCGTAACGCCGTCTCTGGTACCATCGCCCGCTTACATCGTGCGCCCCAACCTGCCGACCCCGTCCGAGCCACACGGATTGAATTTCAAGTTGTGCATGTTTACCCTTAGCTCTATTGATTGATTGAGTGATTGATTTTACTCCCCTTTATATTGATTTCCTTGTTCTTTTATTCATCTGAAGTGCCCCACTTGTTGGCGATGGGAAGATGCAAATGGATGTGGAGGGTGCCCCACTTGTTGGCGATGGGAAGATGCATATGGTTGTGGAGAGTACCCCACTTGTTGGCGATGGCAAGATGCATATGGTTGTGGAGGAGGAAATGACAACAGCTCTGGCTGTTCATCAGCCTTCAAGTCAGAGAAGTCAGAGGTACTTAGCACATCTTCTGCCATAAATCATTCATATATAATTAGAAGTAGCTTAACACATGATCTGGAAATTCCTTTAACTCAGGATCATAGTGATTGAGATGATGGCAGATGTTGGCTCACCTTCCTCTCCTGGCTCCCCCTACTCCCCTAGTTCCCCTTCTTCTCATCGAGACGCTCCCTCGGTCCGCTTCTCCTCTCGAGGCATCCGTAACCATAAGATGTAAGTTGGTTCTCCTATGTGCGTTATGTTTTTGCATATATTAGCACATACTGCTGATTATTAACATTGAAATTAAGAATAATAGACTAAAAATTAAATTCGTAATGAAACAGCACTTGACACCACCATTTTTGAGATCTGAAGTTTTATGATTCATATATGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGCATTGCCCACATATATATATATATTAATGAATCTAAACATATATATGTCTAGATTCATTAACATCTATATGAATATGGGCAATGCTAGAAAGTCTTATAATATGAAATGGAGAGAGTAGACCCTAGAGATGGTTGGTGGTAACGCAGCCGTTGCTTCACTTATTTGTGCGCTCACTTGTTAATCATGTTCACCAGCTGGCCTCATTTCTCCCACTCCGATGTGTCCATCCAAGCATGTTCTACTATCACTCTAGGCTGTGAATATGTTGGGTGGGGGATTGGCCATCTGGTCAGTTTGGGAAGTGAAAGTTACACGAACCATTGGTACTTTGGGCAGATAGTAAATGTTGGGACCTAGGAGATCCACGGATAGAACAGTTTAGTACATATAAATGTTTGATATATCTAAGGCTTATAATTTATTTAGGTCTGTAATCAAATGGTATATATGTTATTGACATGAGAAAACATTTTGTAGTCAATAATACAGAGGGGTGAGATTTATCATGTTAACCTTTGAAACTTTTGATAAAATGTTTTAGGCCTCAGTGTGATATAGACGGATCAGACACTGAAGAAGATCTATATTCATCGTGTGAGGAGGATCCCTACTTCAATAGCCTTGTGGATGATTTCATCAGTGCAGCTACCAGCACTGATCTACTTGCATCATCACCTGAAATTGACTATATGGCAGCTAATCAAAGTCAATCTCTTTTCTATGCTGAAAGTGCATTAAAACATTATAACAACAATGATGAGAACAAGGTAACTTTTTTGCATTTCTTTTGTTGTATTTTCTATTTATGTACGAATCTGGCTGCTAGAAATCTGTTTAGATTTGTTTCTTGCCTCATGCTATGGTGATTAGCCCTCTCTATTCTTGTCATGGCTTTGTCATTTATTTGTAGTTATCTCCAATTGTTCCCAGCAATAATCAGATTAACTCTTAAATTAAAAGTTGTGGTAGGTCGGTAAAATCTAATTCAATTTTAACTTAGAGCATGGACTTAGCACGCCACACAGTTGTTTGATCCTTTTGAATTTTTGAAACAATATTATTTTTTGTATTTTACTTATCTTCCAAAGTTTGTATATGGCTTTAATTATTTTGTTGTGATACCGCTATCCAAGATTCTTAGTATTTTTTTTATTTTCCTTAACTAGCAAAGTACTTGCCTTGCAACGGATTTCAAAAGATATGTCCGAAGTTCTTCACTTGGAAATTGTATTTGCCAAACATAATTTGCAAGCAAACATCCAGCAAAAAACCAAGCCACACACACAAAGATATATTTATCTAGACTTAGAAGATCTCACTAACTCCAACTGATGGCAGATTCACCACCACCACTAGGTTCTTTTATATAGTAGAGATTTTACATGTATATGTGTTAAATATTTGTTTACTGACTTTTATTGTCTTTCTATTTGAAATATAGATAAAGTATGAGTTAATCAGTGCCATTACAAGCAATGCAATTATAGACCGGAGTGGTTATGGTCATGTAAACTTTGTTGCAAAAGGGGATCTACCTGATTCAGTGGATGAGTTCTTTTTCGCAGAAGTACGTTGGGACATTGATTCTTATGTGCCAGTTTGCATGGTCTCCTTAGAAGGGAAGGAAAAATCTGGTTAGTTCGAAAGATAATCGAAAACTCTATTAATCTGTTCTTTTCTTCTAAATTTTAACATGTATATGTAATTGATGTGTACAGGTGGTTACCGTGACATTGAAGTCGACTATCCAAGAGGAGGTTTTGTGGGTGTTCCCGTCGATAAGAATCATTGCTATGCTTGTGGCGATGGACTCAAGCATCCAGAGGATGGAACATTATATGAGAGTGGTCATATCGCTTCCGGCAGTTATTATGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016965