BGIOSGA016968

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016968| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016968, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016968

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016968, complete gene.

LocusTag

OSJNBA0020J04.9

Ensembl Transcript ID

BGIOSGA016968-TA

Ensembl Protein ID

BGIOSGA016968-PA

Length

3214

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27884562..27887775

Sequence Coding Region

27884562..27884564,27885211..27885288,27885402..27885426,27885522..27885554,27885625..27885746
,27885847..27885977,27886073..27886299,27887006..27887262,27887689..27887775

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27884562..27887775 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27884562..27887775 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTTATGCAGGATATGGCTACCATGGGAGTAACTTTGAGCAAACATACCGTTGTTATCCAGCATCTTTCTTTGACAAGCCACACCTGGAAGGTGGCGACAAAGTAATTATGCCACCATCTGCTCTTGATCGGCTTGCTTCTCTGCACATTGAATATCCTATGCTGTTTGAGTTGCATAATGATGCAACTCAGCGGATTTCACACTGTGGTGTGCTGGAATTTGTGGCAGAAGAAGGCATGATCATCATGCCCTACTGGATGATGCAAAACATGCTTCTTCAAGAGGGTGACACTGTCCGTGTAAAAAATACAACCCTTCCCAAGGGTACATATGTCAAGTTGCAGCCTCACACAACTGACTTTTTGGACATCTCAAATCCGAAGGCCATCCTGGAGAAAACACTAAGAAACTTCTCTTGTTTAACCACCGGCGATAGTATCATGGTAGCTTACAACAACAAACAATACTACATTGACATTGTTGAAACAAAACCTGCTTCCGCAGTTAGTATTATTGAGACGGACTGTGAAGTGGACTTTGCACCTCCTCTTGATTACAAAGAACCTGAAAATCCGCAGCAACCATCAGTTCCTGCAAGTGAGGCAACTGCTGAAGATGAAAATGCTAAAGTTGGAGATGAACTGAAATTCAGGCCGTTTACTGGTTCTGGAAAGCGGCTGGATGGTAAAGCCTCAAAGCTACAAGCAACAGAGGTCCCTTCTGCCTCACGTTCTTCCCCTTCAGACTCAAACAAAAGGGTGAATCAGGAAACGTTAGCACCAGCATCTTCAGGAGCTAGCAACTCCACACGCCAGAAATCAGGAAAGCTTGTTTTCGGTTCAAGTGCAAACAACAACAAAGAACCGCAAAAGGCTTCCGTTAAGGATGATGAGTCTCCAAAGAAGGACGAGCCCAAGTTCCAAGCATTTAGTGGGAAGAGCTACTCCTTGAAACGTTAG</cdnaseq>

Protein Sequence

<aaseq>MFYAGYGYHGSNFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYVKLQPHTTDFLDISNPKAILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDYKEPENPQQPSVPASEATAEDENAKVGDELKFRPFTGSGKRLDGKASKLQATEVPSASRSSPSDSNKRVNQETLAPASSGASNSTRQKSGKLVFGSSANNNKEPQKASVKDDESPKKDEPKFQAFSGKSYSLKR</aaseq>

Gene Sequence

<dnaseqindica>1..3#650..727#841..865#961..993#1064..1185#1286..1416#1512..1738#2445..2701#3128..3214#ATGGTATGCATCACTTGTTATTGCCATTAAAATTTATTGATTTTTTGTGTCGCAATTTGGTGCATGTATATTATGCTTGCTGGGTTATTTCTCCCGCATGTGGAATTTCTTCTAGACTAGAGAAATCACCTAATATATGTTGAAAGTTCATGTTTACACCTAAAGGAAATGTGTACTCTCATGTTGTCTAAGGGGATCAAGTGGAACAAAAGAGCAGGTAATAACTAGCCTTATCAGAAAGGATCTCTTTGGAATTTGAAATATATTAGTCATTGCTACATGTTTAAAAATACTGGAACTTCCTGGTGTATTATTGCTGGCTGAACTATGGAATAGTTAGCCCCAAAAATGAAGTTCATAGTGTACACACAATACACAATGTTTTCCTGAGATTATCCCCTAGCAACATCACACTGCAATAAAATTCCCTCTGGTGTTTGCATTTCTATTTTTCAGTCCTGTTTGTAACTTTGTATATCTTATGTTTCGTTCCTTCCTCATCCTTACCTTTCTACTGAGCTTTTCAATTTAAGAGATGCCAAAGATAAAAATCACTACTTATTCTTCTGTGTGTGTGATGCTTGTCTTTTCAGGTTGCACTATGTAATTGGCATAAGCTTAACTAATCCTTTTATTTTTGCTTCTGTAGTTTTATGCAGGATATGGCTACCATGGGAGTAACTTTGAGCAAACATACCGTTGTTATCCAGCATCTTTCTTTGACAAGGTATCCTTCTCCCCTGTGCTGTTATTGAAATATCTAGCATTGTTTTATCCTTTTACATGATGAACTGGATTTAACTGTCTTTTTTTTCCTTTTTTTTTGCTTCATTTCTTCAGCCACACCTGGAAGGTGGCGACAAAGGTATGTCTTCAGACCCCTCCCCCCTCCTTCTCTCACACACACAAACAATTCAAACCGCATGCCACTGACATTATATTTTATCATCATCAATGCAGTAATTATGCCACCATCTGCTCTTGATCGGCTTGGTAAGCTCAATCTCAGCTCTTTTATACTCTGGCCTTAGATTTACATTAATTGTTTTGGCTCCTCTAACAGCTTCTCTGCACATTGAATATCCTATGCTGTTTGAGTTGCATAATGATGCAACTCAGCGGATTTCACACTGTGGTGTGCTGGAATTTGTGGCAGAAGAAGGCATGATCATCATGCCCTACTGGGTATGTAATATGCAGTGGATTTTCTTTACTGATATCTGCAATTATATTCCAAAGAAACATATTGACTGATTTATGCTATAATTCTTTCATATATGTGCAGATGATGCAAAACATGCTTCTTCAAGAGGGTGACACTGTCCGTGTAAAAAATACAACCCTTCCCAAGGGTACATATGTCAAGTTGCAGCCTCACACAACTGACTTTTTGGACATCTCAAATCCGAAGGCCATGTGAGGATATGATAAAAACGCTCCATATTAAAACCATTCCGTTTCTTGGGGAAATCATCATTCTAATGATAATGCTTTGCTTTGTGACATTGCAGCCTGGAGAAAACACTAAGAAACTTCTCTTGTTTAACCACCGGCGATAGTATCATGGTAGCTTACAACAACAAACAATACTACATTGACATTGTTGAAACAAAACCTGCTTCCGCAGTTAGTATTATTGAGACGGACTGTGAAGTGGACTTTGCACCTCCTCTTGATTACAAAGAACCTGAAAATCCGCAGCAACCATCAGTTCCTGCAAGTGAGGCAACTGCTGAAGGTTTGTCTTTAGATTAAGTGCACTTTAGTTTTCAGATGAACTTGTATTGAAAGGCTGAATTTTATCCTCCTCTTCTATAGCAATTTTTCAAGTGTGCTGCCATCTGGGAGCATATACTCCACACCCTGAACTAGTATTTTCATCTACTCCCATAGTCCTGTATTTTGCATAGTAAACTGCAACATAAGTTAAACAAAGAACAATAGAAGGAAAACTAGAACTGGAAGACATGCTTGAATCAAAGACGTCAAGCACTCTGTCCAGTGGTGTGAAGTGGCACTGTTCTGGATTGCTTGGTTTTGGGGTTGACAGCCTTTCTGTCAACTTCTTGTATGCTACTAGTTTGTTTACTGGGTTGTCAGCCTTTCTGTCAACTTGTATTCTATGGTTTGCTTCTTTCTTACTAAAATTCAGCCGGTCATATTTGGCTTGCCTGGCTAAAACTACATAAAAAAAATTCATTCTTTTTCATGCTTATGTATTGAAATTCTATATAAGGTGTATTTTCGTCATATCAAGTGTGAACGATCTGCAATGTTAACGTTTCTATAAAAGAAAATATGTGCTGTTAACATGTATTCCACATGCATGTTTGCATATGTTTATCAAGTGCATTCAATACAAGATTCCAGCTGCCAAGGTGTGTAGTGGTGGCATTTTTGAATTTCTCCTTTTAAAACTATCCTTTTGGCGACCTTCCCACCAGATGAAAATGCTAAAGTTGGAGATGAACTGAAATTCAGGCCGTTTACTGGTTCTGGAAAGCGGCTGGATGGTAAAGCCTCAAAGCTACAAGCAACAGAGGTCCCTTCTGCCTCACGTTCTTCCCCTTCAGACTCAAACAAAAGGGTGAATCAGGAAACGTTAGCACCAGCATCTTCAGGAGCTAGCAACTCCACACGCCAGAAATCAGGAAAGCTTGTTTTCGGTTCAAGTGCAAACAACAACAAAGAACCGCAAAAGGTATTACATTTTTCTCGCACTTGAACACCCTCCTTTCCTTTCTTTTCATGCTTCATTTTTTCCCTACTGAATCTGTTTTTTTTATCTAATAAATGCGTTACTAAATGTGAATAAATTTGCAAGAATGATGAGCTTGTTTTCTCTGCATATGTTCACAGAATCACCGGCCAGGATGGCCAGCTAATTGAAGGGTTAACCTTATAAATTCTATGTATTGGCCTTTTGGGCGACAAACAGAGGATGCTAGCCGGAACTTAGATTCATCTATGATCTAGAACTCAAATATATTTAGATATTTTTTGTTCTGTCAGTTGCTTTCCTAGTTAGTGAGCAGAGTTTTGATTGAGTGGAATGACATGTTTATGCTGCCTGCATTATGGATATGCCGACTAGTTATTGATTCTTTTTTTTTTTTTTTGTGAACAGGCTTCCGTTAAGGATGATGAGTCTCCAAAGAAGGACGAGCCCAAGTTCCAAGCATTTAGTGGGAAGAGCTACTCCTTGAAACGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016968