BGIOSGA016969

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016969| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016969, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016969

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016969, complete gene.

LocusTag

OSJNBA0020J04.11

Ensembl Transcript ID

BGIOSGA016969-TA

Ensembl Protein ID

BGIOSGA016969-PA

Length

3181

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27898058..27901238

Sequence Coding Region

27898058..27898458,27899639..27899759,27899848..27899967,27900367..27900597,27900672..27901238

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27898058..27901238 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27898058..27901238 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCATTCCAGCTGCGCTTCGGCCTCCGGATGTCCCCCTCGCGCTCCTCCGACGAGGAGGAGGAAGACGACGAGGACGAGGAAGGGTTCGAGTACGAGGAGATGCTGAGCGACGACGGGACGGACTCGCCGCCGCCGCTGATGATGCAGGCGGAGAAGGGAGGGGGAGGATTGGTCGGGGCGGTGGTGGGGGCGCTGCGGAGGTCGCTGGTGATGTGCAGCGCCGGGAAGGTCGGGGAGGAGGAGGACAGCGAGGACGAGGAAGAGGAGGGGATGGAGATCGGGCGGCCCACGGACGTGCGGCACGTCTCCCACGTCACCTTCGACCGCTTCGGCGGCTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGAAGTTCCCAGCCCCACGCCCAGCGCCAGTGTAAATGTATTTGGTGTTTCACCAACCTCTTTGCAATGTTCATTTGATCACAAAGGAAATAGCGTGCCCACAATACTGTTGATGATGCAGAGGAAGTTGTATGAACGAGAGGGACTTAAGATCGAAGGGATCTTCAGAATTAACGCAGAGAATAGCCAGGAAATCTGTGTCAGGAAACAACTAAACAGTGGTGTGATTCCAGATGAGGTTGACTTACACTGCCTTGCAGGGTTGATAAAGGCATGGTTTCGGGAACTCCCAACCGGTGTATTGGACTCACTGACACCGGAACAAGTAATGCATTGCAACACAGAAGAGGACTGTGCTCTCCTTGCTTCAATGCTACCACCAGTGGAAGCCGCATTACTCGATTGGGCTACCAATCTGATGGCTGATGTTGTGGAGCATGAAAACTACAACAAGATGAATGCTAGAAACATCGCTATGGTCTTTGCGCCAAACATGACTCAGATGGCCGATCCATTGACTGCCCTGATACATGCAGTTCAGGTCATGAATTTCCTCAAGACATTGATCTTGAAGACTTTAAAGGAAAGAGAGGCAGCCGGAACACCTAAGACAACGGAACCATGCTCCGGTTCTCCAAACGGACAAGATAAACCTCCGACGCCAGAGAATTTGGAGAGACCCATCATTTGTTCAGATCAGAAAGGCATAGATAAACCTATGTTTGATATGGCTACTTGTGATCAGCTGCTGTTTGGACCTAAACAATTCCTTGATCATCGTGAGAACAACAAATTTGAAGGACCGGAGAAGCATGACATAGGCCAACCGAAGCGCCATAGCGAAGCTTCTCCTCTTGGTAATGATTCGAATAACCAAGTCAGCAGCCCTGGAAAAGAATTTGGCAACAGAAATGTGGAAGGCCTGTTCGACAAATTTAGTTTTAGGAAAGGTGTCGAGAGGCTTTGCAGGCACCCTGTGTTCCAGTTGAGTAGGTCCATGAAGAAGTCTGCAGACGTTGTGGTCTTTGATGCTCCTGGAGAAGCAAGACAAGCTTGGGGTTTGATATGA</cdnaseq>

Protein Sequence

<aaseq>MAPFQLRFGLRMSPSRSSDEEEEDDEDEEGFEYEEMLSDDGTDSPPPLMMQAEKGGGGLVGAVVGALRRSLVMCSAGKVGEEEDSEDEEEEGMEIGRPTDVRHVSHVTFDRFGGFLGLPADLEPEVPSPTPSASVNVFGVSPTSLQCSFDHKGNSVPTILLMMQRKLYEREGLKIEGIFRINAENSQEICVRKQLNSGVIPDEVDLHCLAGLIKAWFRELPTGVLDSLTPEQVMHCNTEEDCALLASMLPPVEAALLDWATNLMADVVEHENYNKMNARNIAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKTLKEREAAGTPKTTEPCSGSPNGQDKPPTPENLERPIICSDQKGIDKPMFDMATCDQLLFGPKQFLDHRENNKFEGPEKHDIGQPKRHSEASPLGNDSNNQVSSPGKEFGNRNVEGLFDKFSFRKGVERLCRHPVFQLSRSMKKSADVVVFDAPGEARQAWGLI</aaseq>

Gene Sequence

<dnaseqindica>1..401#1582..1702#1791..1910#2310..2540#2615..3181#ATGGCGCCATTCCAGCTGCGCTTCGGCCTCCGGATGTCCCCCTCGCGCTCCTCCGACGAGGAGGAGGAAGACGACGAGGACGAGGAAGGGTTCGAGTACGAGGAGATGCTGAGCGACGACGGGACGGACTCGCCGCCGCCGCTGATGATGCAGGCGGAGAAGGGAGGGGGAGGATTGGTCGGGGCGGTGGTGGGGGCGCTGCGGAGGTCGCTGGTGATGTGCAGCGCCGGGAAGGTCGGGGAGGAGGAGGACAGCGAGGACGAGGAAGAGGAGGGGATGGAGATCGGGCGGCCCACGGACGTGCGGCACGTCTCCCACGTCACCTTCGACCGCTTCGGCGGCTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGAAGTTCCCAGCCCCACGCCCAGCGCCAGGTGAGCTCGCCGGCGCTAACTCTCTGCAATTCCTCTGTTTCTTCTACTCTTCGGTCTCTCTCTTTCAGTTTTCTGAGGATTTTACCTGAAAGAAGCTAGTAGCTACGTACTCTACATACCCAAATATTCTTTGGTACTTGTATTTTTCAATTTCACGCAGAAATATGTGTTAGTAAATTTGTTGTTTTATCCTTCTCTGTTCTGTGTTCTCCAATGCAATTAGCGTATAACCTCTTTACAAAATATATTGTGTTCATAGAAAGGCTCCCAAGAAAGTTGATAGTACTAATATGATGTTTCAGAACGATGATAGTGAGCTTTGGTTTCTTTTCTGGTATGTTTAGTTGATCGCTCAGATGATACAGGGTAGAAAGAGGGCGATTTGTTTAAGGATGTAAGATTAATTTATTCCACAAGTGGATCTAGTAATTAAAAAAGGACAAGTAGTACCTTTTTAATAAAAAGTTCAGTTCTTAATTCTAGTATGCGGTTATATAGTTAGATTGCTGAGTCAAGAAGTACATGCCATCAAACAAGGAATGGAAGTATGGAACACTATGAAGGTATGTGAAGGTATACGATTCTGAAGATATATGAGGGCATAAGAGAAGAATAACTCATATGTAGGATTTGGTACAATACTACCATATGACGGCCATGGGTTGAACTTTCAACGGATCAGACTTGAGTTACTTCGTTCTGTGCTTGAGCTTTAAGCAACGGGGCTGTTTGAGGTGGTTGGCCAGCATGAGCAACAAATGGGAATCTTCAAACCTATCTTTTTTATTTTGGATTAGTTCTCCTGTACTTTGCATCATCATATATAGTAATGTTCTGTGAAGTTTGTCCTTTTGCATTTACAAATATCATTTACACCATCTTTTTAAGGTTGTTAACGTCAAATCAGTATTTGATGTACAACCTAGTTAAATGAGCTAGGAATATAAGACATTGTCCTGTTGCTACTGCTGTTATGTCATAATCTCTTTTTTACCCCTTTAACTTGTAGTGGTTACAGAAGTGAAGATTCAAAGTTTATTCACCTTAACTACGATCCTTCCCTCCTTTTTCTTTTTCTTTTTTACCGTGAAACAGTAGGGGAGGCCTCTACCGTATATTAATTTTCGAAAAGTTTATGTACATGATACTTAACAATTTCCATGTCTAATTTTCCATGCAGTGTAAATGTATTTGGTGTTTCACCAACCTCTTTGCAATGTTCATTTGATCACAAAGGAAATAGCGTGCCCACAATACTGTTGATGATGCAGAGGAAGTTGTATGAACGAGAGGGACTTAAGGTATGGCCACCGCAACCTAACGATTAGCATTAGAAAAGTCAGTATTCAAGCCTTCGGAATACTTATCCATTGTGTTCTTACTTCTTAGATCGAAGGGATCTTCAGAATTAACGCAGAGAATAGCCAGGAAATCTGTGTCAGGAAACAACTAAACAGTGGTGTGATTCCAGATGAGGTTGACTTACACTGCCTTGCAGGGTTGATAAAGGTAGCATGAACTTCCTCATCTCTCCTTAATTTTTCCGGTCCACGGCCTGAGCTGTATGAGGCAAAAAAGATCGTTATTATTTATCTGCAATTTGCTCTTGTTTGTTTAGTTTTTCAGTACTGAGCATTACCTCAGATTGACAGACGACTAGGCAGTTGCATCTATGTATGTGCATCCCCTTTTTATGCAATCTGAACATTTCAGAACCTGAAATGTTTGCAGACATGAAGGAATACAGAATAATTGGTGCAAGGAACAGTACTTTTTAAGTAAAAAGTCGAATAAGTATTTGCAGGCAACTGACTATTAGATGTGCATGCTATTAGTCATATTTCTTGTACATGGGTTATTGGCTTACTGGAGGATCTATTCCATGATCACTATATTCCCTTTTTATAGGCATGGTTTCGGGAACTCCCAACCGGTGTATTGGACTCACTGACACCGGAACAAGTAATGCATTGCAACACAGAAGAGGACTGTGCTCTCCTTGCTTCAATGCTACCACCAGTGGAAGCCGCATTACTCGATTGGGCTACCAATCTGATGGCTGATGTTGTGGAGCATGAAAACTACAACAAGATGAATGCTAGAAACATCGCTATGGTCTTTGCGCCAAACATGACTCAGGTATTAGAAACAACTCTGGATTCTTTCGTTAGAAAAGCATACACATACACTAACCTGCAATGTTTGTTTTCCAGATGGCCGATCCATTGACTGCCCTGATACATGCAGTTCAGGTCATGAATTTCCTCAAGACATTGATCTTGAAGACTTTAAAGGAAAGAGAGGCAGCCGGAACACCTAAGACAACGGAACCATGCTCCGGTTCTCCAAACGGACAAGATAAACCTCCGACGCCAGAGAATTTGGAGAGACCCATCATTTGTTCAGATCAGAAAGGCATAGATAAACCTATGTTTGATATGGCTACTTGTGATCAGCTGCTGTTTGGACCTAAACAATTCCTTGATCATCGTGAGAACAACAAATTTGAAGGACCGGAGAAGCATGACATAGGCCAACCGAAGCGCCATAGCGAAGCTTCTCCTCTTGGTAATGATTCGAATAACCAAGTCAGCAGCCCTGGAAAAGAATTTGGCAACAGAAATGTGGAAGGCCTGTTCGACAAATTTAGTTTTAGGAAAGGTGTCGAGAGGCTTTGCAGGCACCCTGTGTTCCAGTTGAGTAGGTCCATGAAGAAGTCTGCAGACGTTGTGGTCTTTGATGCTCCTGGAGAAGCAAGACAAGCTTGGGGTTTGATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016969