BGIOSGA016991

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Revision as of 04:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016991| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016991, complete gene.| tag = OS04G05...")
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Gene Name

BGIOSGA016991

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016991, complete gene.

LocusTag

OS04G0583700

Ensembl Transcript ID

BGIOSGA016991-TA

Ensembl Protein ID

BGIOSGA016991-PA

Length

5030

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28305898..28310927

Sequence Coding Region

28305898..28305945,28306296..28306382,28306958..28307047,28307325..28307519,28307834..28309861
,28309991..28310137,28310303..28310706,28310798..28310927

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28305898..28310927 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28305898..28310927 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGGAGTTTTGATGGGAGGATGCCAACAAGAGGAGTTGAGCAGGCCATTGTTGCTCTGAAGAAGGGAGCACATCTCCTGAAATTTGGAAAGAGAGGGAAGCCCAAATTCTGCCCATTCAGGCTATCTTCAGATGAGAAAACATTAGTCTGGTACTCGAAGGACAGGGAAAAACACCTGAGCTTAAATTCCGTTTCCACTGTTGTTCTTGGGCAGAAGACTATCTGCAGAGACAGAGATCAAGCTGAATGCTGGTTTCTTGGTTTGACTGCCTTAACATCTTCTCCTTATAGTCCACTTCCATTGGCTGGCTCAAAGAGCGGTAGACAGATAAACAGTTGCGCAATCAGTCCCCGCAGCTATCTTCAGCGAAAGTGCAGGTTATCAGCTGCCCTTGACACACCAAGGCACACCCAGGTATACCCATCATACGGGAGTCCCAAGATCATACAGAAAAAAATCTTTGGTGGTAATCTGGATAGCTCAGAAGCATTATTTTATCCAAGGCATCCAACCTTTTGTGACATTGATTCTTACATCGAGAAGCTTAACCCCAAGATAGCAACTCCAGTAAAACATGGTCTGAAGGACATCATGGTTGCTAACAGAAGGGCACAGAATATTACACATACACCTAAACTGAAGACTTTTGAAGGGCCCCGTGTGGCATGTAGGTTGGATTCACTTAAGGATGTTTTTCTCTGGGGTAGTGTTCTTGGCAGCATGTTAGGCAGTGAAGACATTCCAAAATCCCTTCCGAGATTGGTAGGCTCAGCTAAAATGCTTGATGTACAAAGCATTGCTTGTGGGGAGAATCATGCAGCCATAATCACTAAGCAAGGGGAGGTCTATACCTGGGGCAGTTATAGCAGTGGGAGATTGGACCAAAAAGTAAATGTCAATGCCTCCTGTCCCAAAATGGTCGAGTCTCTTGCCTCTGTACATGTCAAGGCGGTTGCATTTGGATCAAAGCACACGTGTGCAATCACGGTTTCAGGCGAACTTTTTGAATGGGGTGAAGGAGCTCATAGCTTGGGATTGATGAATGACTGGTATGGAAGGAACCAATGGTTTCCACATAAATTTTTGGGTCCTATGGACAATATTTCTGTGTCAAAAATTGCTTGTGGTGAGTGGCACACAGCTATTATAACATCTTCTGGCCAGTTATTCACATACGGTGACGGAACATTTGGTGTTCTTGGGCATGGAGATACTCAAGGAGTTGCTCGGCCAAAAGAAGTAGAGTCCTTAAAAGGATCAAGAGTGAAATCGGTAGCATGTGGTCCATGGCACACGGCTGCCATCGTGGAAGTAATGAGCAGTTTCAAGGGTAATGCTCCAAGTGGTAAGCTCTTCACCTGGGGTGATGCGGATAGAGGAAAGTTGGGTCATGCTGACAGAAAAATGAAGCTTCTACCAACATGTGTTGATTCACTTACTGCTTATGATCTTATTCAGGTATCCTGTGGGACAGCAGTAACTGTGGTACTTACTGTTACTGGAATGGTATTTACTATTGGAAGTTCTAGGCATGGGCAACTTGGGAACCCCAAAGCAGATGGTGAATCTATTTGCAGTGTTGAAGGGCCACTTAAAACTGAGTTTGTCAGAGAGATATCATCGGGGTCTTCGCATGTAGCGGTGTTGACTATGAGTGGGAAGGTTTTCACATGGGGTAAAGGTGCGGAAGGGCAACTTGGTTTAGGCGATTACAGTAATAGGAGCTCTCCAACTTTAGTAGAGGCATTAGAAGGCAGGGATGTTGAAAGTGTAGTTTGTGGGTTCAATTTTACTGCTGCGATCTGTTTGCACAAGACGATGTCAATGAAGGACCAATCTGTATGCAGCAGTTGCCAGATGGTTTTTGGTTTTACTAGAAAGAAGCACAACTGTTACAACTGTGGTTCCATGTTCTGCAGTTCCTGCACTAGTAACAAGATCACGATGGCAGCACTTGCACCAGACACAAACAGAAGGTACCGTGTTTGCGATGCCTGTTTCTATCAGTTGCAGAAAGTTGTGGATTCTAGCAAAGATAAGTCTAGGCTAAAGATCAGCAAAGGAGAAATGTTTAAATTGGAATTAAAGGCATACACACCTAAATTGTCACGCCTATTCAAGGAAGCAAACTTTTTTGCAGAAAAGATGGCTTCAGTACAAGGTACTAATCAGAGAAATGAGGAACCTGCCACTGCAGTGCAGACAAAAACTGAAAGATGGGGGCAAGTTGAGTGCCCTGCTCTATTCATATCTGCACAAGACAGTTTTCAAACTCAGCCGGTATCAAATAGTGAGGGGTGTGCTATCTCTTTTTCACAAAGAATGCATGATTCTGCGGTGCTTAAGTCTGGCGTCTCTTTACGGTTTACTGACGCTCAAAGAGAAGAAATAGAAATGATGCAAACAGAACTTCAAGGACAAGTGAAACAACTTCATTCACAGGTAGCTGTTCTCACAGAGCAGTGTCAGCAAAAAAGTGTTATGGTTCAGCTATACAAACAAAAACTGGATGATACATGGTTAGTTGTTAGGGATGAGGCCGCAAGGTGCAAAGCTGCCAAAGATATCATAAAGGTTCTAACTGATCAGTGCAATGCCTTGTCAGAGAAACTTTCAATTGGTCAGCTGTCAGAAAACTCCAAGATAACACCTAATAGCATCCCAATGCAACCGACGAAAATAGAATTGCAAGGGAACACCGGCCGGAATCTGGTCACACGCAAACTCGGCCAGCTGAACAATACCCAAAATCATGGCAGCAGCATCCAAACAGAAAAGGAATGTGTACCTTTGTCAAATGCTGTTGTGCCAGAAGATGTACCGTTCAGTCAACAGAATGGGGCCAGGAAATTTAGCAGCGATGGGTACACCACGGAAGCACCATTGGCTGCCCCTCCGACTGATAGTGTGACTGAACAAATTGAGCATGGTGTATATGTCACATTTTCTACATCGTCCTGTGGAAAGAAAGACATAAAGCGCATAAGATTCAGCCGGAAGCATTTTGGTGAGAAGGAAGCTCAGCATTGGTGGGAACATAACAAGACCAGGGTATATGACAACTACAAGGTTGAACAAATGGCAACACCGTCTGTAACTTTGAGCTGCTCTTCAACACGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGSFDGRMPTRGVEQAIVALKKGAHLLKFGKRGKPKFCPFRLSSDEKTLVWYSKDREKHLSLNSVSTVVLGQKTICRDRDQAECWFLGLTALTSSPYSPLPLAGSKSGRQINSCAISPRSYLQRKCRLSAALDTPRHTQVYPSYGSPKIIQKKIFGGNLDSSEALFYPRHPTFCDIDSYIEKLNPKIATPVKHGLKDIMVANRRAQNITHTPKLKTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKKHNCYNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDSSKDKSRLKISKGEMFKLELKAYTPKLSRLFKEANFFAEKMASVQGTNQRNEEPATAVQTKTERWGQVECPALFISAQDSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVSLRFTDAQREEIEMMQTELQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAARCKAAKDIIKVLTDQCNALSEKLSIGQLSENSKITPNSIPMQPTKIELQGNTGRNLVTRKLGQLNNTQNHGSSIQTEKECVPLSNAVVPEDVPFSQQNGARKFSSDGYTTEAPLAAPPTDSVTEQIEHGVYVTFSTSSCGKKDIKRIRFSRKHFGEKEAQHWWEHNKTRVYDNYKVEQMATPSVTLSCSSTR</aaseq>

Gene Sequence

<dnaseqindica>1..48#399..485#1061..1150#1428..1622#1937..3964#4094..4240#4406..4809#4901..5030#ATGGCTGGGAGTTTTGATGGGAGGATGCCAACAAGAGGAGTTGAGCAGGTCTGTAAAAGATTTCCCCTTTCCCCCCCTCCTTTCTAGCCTCTTGAGAGTAATTTTGACGCCATTTATTGATTTATTGGATTTCTTTCGATTATTTTTGGAATTGCAAGCCTTCAAATGTCTCGCTTTTATTGCTAACCCGTTGGACTACCATCGCTACATCTTCTGGGGGAAATGAAATGCATTGTTTTCCTATTATATTCTCTCTCAACCTCATGGAGTCAGCGTTCGTACTGAGAAAAACTGCTCGGATTAAATCCGAATGATCACCCATCAAATCCATGTTGCCCTGAGAGTGGAGGAGTTCTGATTTTTTTTCTTTTTCCTTTTGTTTTGTTTCTGCTATCCAGGCCATTGTTGCTCTGAAGAAGGGAGCACATCTCCTGAAATTTGGAAAGAGAGGGAAGCCCAAATTCTGCCCATTCAGGCTATCTTCAGTGAGTAATTCTGCTGTAAATATGCTCATATTATCCACGAATCCTAATCAATAATGGTGGGTTTATAAACTGGGGAGTGGAAATTCTTAAAGCCATGGGAGTGCTAATGACAGAAATACGCTGTTATTGGACCATTAGGTACTTTGTCATTCCCCTGAGTCCCTATAAGATGCATCCATGGAAAATGTTTCAAGTACAATGTGCAAGATAATACGTACCTTTTACCACTATTACGAAAATAGTGCTTGCAGCTAAAACCAGCCGAAGTATGCAATTTGTTAGTGCCTCTGTGGCCTGTCACAAGGAATTCATGAGTTATTTTATAAGACAATCTCAGAGAATTTGATATACTGTTAATCTGTTATGAACAAAACTGGAGTGCTCCATGTTAGTCTATATTAATGCTAATATGTTGGCCAGTAAATAAGTTTTGGACCGATGGGGGTATTTGTCCTTACCTTTTGGAATACCAATAATCTGTTACCACATAGAATTTTGTACCTGCAGCTTTTATGTCATGCGAAAGGATTTCTTCTCTTTGCTGTCATGCCAAAGGATTTCTTTCCTCTTTGCAGGATGAGAAAACATTAGTCTGGTACTCGAAGGACAGGGAAAAACACCTGAGCTTAAATTCCGTTTCCACTGTTGTTCTTGGGCAGAAGACTGTAAGCAATTCATTATGCCCTGATTAAGTTATGATGCTTGTCCCTTCGTCACATAGCAATACAATATTCTAAGGATTTCAGAACTTTACAGATGAATTTTCTGCGTCATCGCTGGCCAGAGAAGGAATCACAATCCTTGTCACTCGTATACAAAAACGGCGAGTGCTCAATAGACTTGGTACTCCTCTTACTAGATCTTAAATCAGTTAGAGCTGCAATCTTATAGTATCTGTTTTCCCTACTCATACCACATGTTTTGAAAATTTCGTTGGCCCAGATCTGCAGAGACAGAGATCAAGCTGAATGCTGGTTTCTTGGTTTGACTGCCTTAACATCTTCTCCTTATAGTCCACTTCCATTGGCTGGCTCAAAGAGCGGTAGACAGATAAACAGTTGCGCAATCAGTCCCCGCAGCTATCTTCAGCGAAAGTGCAGGTTATCAGCTGCCCTTGACACACCAAGGCACACCCAGGTTAGTTCTGCAGCAAACCATATTTGGTTCTGTTTTTGTCGAGTAATATGAATTTCAGATTCATAACATGGCCAAATAACAAAAGCTTAAGATTCTACTGATATGTATGTCCCAGCTCTCAACTGCAAGGGTATTGAATGAGATCCACATATAAATTATTATTTGACTTTGAATTAAACTGTACAGGCATATACTTTAACAAGGGGTGTCATTTTTTTTATGTTGCTTATATTCTTAAGTAGACCTGCATTGCTACCCAAATGTTATATGTCATCAAAGAGTTGATTGTTCCTTCAATGAATTTCTTCTTGAAGGTATACCCATCATACGGGAGTCCCAAGATCATACAGAAAAAAATCTTTGGTGGTAATCTGGATAGCTCAGAAGCATTATTTTATCCAAGGCATCCAACCTTTTGTGACATTGATTCTTACATCGAGAAGCTTAACCCCAAGATAGCAACTCCAGTAAAACATGGTCTGAAGGACATCATGGTTGCTAACAGAAGGGCACAGAATATTACACATACACCTAAACTGAAGACTTTTGAAGGGCCCCGTGTGGCATGTAGGTTGGATTCACTTAAGGATGTTTTTCTCTGGGGTAGTGTTCTTGGCAGCATGTTAGGCAGTGAAGACATTCCAAAATCCCTTCCGAGATTGGTAGGCTCAGCTAAAATGCTTGATGTACAAAGCATTGCTTGTGGGGAGAATCATGCAGCCATAATCACTAAGCAAGGGGAGGTCTATACCTGGGGCAGTTATAGCAGTGGGAGATTGGACCAAAAAGTAAATGTCAATGCCTCCTGTCCCAAAATGGTCGAGTCTCTTGCCTCTGTACATGTCAAGGCGGTTGCATTTGGATCAAAGCACACGTGTGCAATCACGGTTTCAGGCGAACTTTTTGAATGGGGTGAAGGAGCTCATAGCTTGGGATTGATGAATGACTGGTATGGAAGGAACCAATGGTTTCCACATAAATTTTTGGGTCCTATGGACAATATTTCTGTGTCAAAAATTGCTTGTGGTGAGTGGCACACAGCTATTATAACATCTTCTGGCCAGTTATTCACATACGGTGACGGAACATTTGGTGTTCTTGGGCATGGAGATACTCAAGGAGTTGCTCGGCCAAAAGAAGTAGAGTCCTTAAAAGGATCAAGAGTGAAATCGGTAGCATGTGGTCCATGGCACACGGCTGCCATCGTGGAAGTAATGAGCAGTTTCAAGGGTAATGCTCCAAGTGGTAAGCTCTTCACCTGGGGTGATGCGGATAGAGGAAAGTTGGGTCATGCTGACAGAAAAATGAAGCTTCTACCAACATGTGTTGATTCACTTACTGCTTATGATCTTATTCAGGTATCCTGTGGGACAGCAGTAACTGTGGTACTTACTGTTACTGGAATGGTATTTACTATTGGAAGTTCTAGGCATGGGCAACTTGGGAACCCCAAAGCAGATGGTGAATCTATTTGCAGTGTTGAAGGGCCACTTAAAACTGAGTTTGTCAGAGAGATATCATCGGGGTCTTCGCATGTAGCGGTGTTGACTATGAGTGGGAAGGTTTTCACATGGGGTAAAGGTGCGGAAGGGCAACTTGGTTTAGGCGATTACAGTAATAGGAGCTCTCCAACTTTAGTAGAGGCATTAGAAGGCAGGGATGTTGAAAGTGTAGTTTGTGGGTTCAATTTTACTGCTGCGATCTGTTTGCACAAGACGATGTCAATGAAGGACCAATCTGTATGCAGCAGTTGCCAGATGGTTTTTGGTTTTACTAGAAAGAAGCACAACTGTTACAACTGTGGTTCCATGTTCTGCAGTTCCTGCACTAGTAACAAGATCACGATGGCAGCACTTGCACCAGACACAAACAGAAGGTACCGTGTTTGCGATGCCTGTTTCTATCAGTTGCAGAAAGTTGTGGATTCTAGCAAAGATAAGTCTAGGCTAAAGATCAGCAAAGGAGAAATGTTTAAATTGGAATTAAAGGCATACACACCTAAATTGTCACGCCTATTCAAGGAAGCAAACTTTTTTGCAGAAAAGATGGCTTCAGTACAAGGTACTAATCAGAGAAATGAGGAACCTGCCACTGCAGTGCAGACAAAAACTGAAAGATGGGGGCAAGTTGAGTGCCCTGCTCTATTCATATCTGCACAAGACAGTTTTCAAACTCAGCCGGTATCAAATAGTGAGGGGTGTGCTATCTCTTTTTCACAAAGAATGCATGATTCTGCGGTGCTTAAGTCTGGCGTCTCTTTACGGTTTACTGACGCTCAAAGAGAAGAAATAGAAATGATGCAAACAGAACTTCAAGGACAAGTGAAACAACTTCATTCACAGGTATTTTTTTTTTCCGGGAATATGCATAAGATTTGCGTATCATAGTATTAAGCTTGGAGGGTAATTCATTTATAATATCCATTACCAAATTTGGTAACTGCAAAAATTACATATTTATTGTTCAAGCAGGTAGCTGTTCTCACAGAGCAGTGTCAGCAAAAAAGTGTTATGGTTCAGCTATACAAACAAAAACTGGATGATACATGGTTAGTTGTTAGGGATGAGGCCGCAAGGTGCAAAGCTGCCAAAGATATCATAAAGGTTCTAACTGATCAGGTATGAGCTCGACGTAATCTCATTGTAGAGTACTGCTGGTACCTTTTTCTTGAGCAACAAAGAACTAATGTAATACAGCATTACCTTATATCGTGGGGGGCTGGGGCGTTCTGAACTTTTGGTTGATATATGACCTATTAACTTGGTGTATTGCGAAATGTGCAGTGCAATGCCTTGTCAGAGAAACTTTCAATTGGTCAGCTGTCAGAAAACTCCAAGATAACACCTAATAGCATCCCAATGCAACCGACGAAAATAGAATTGCAAGGGAACACCGGCCGGAATCTGGTCACACGCAAACTCGGCCAGCTGAACAATACCCAAAATCATGGCAGCAGCATCCAAACAGAAAAGGAATGTGTACCTTTGTCAAATGCTGTTGTGCCAGAAGATGTACCGTTCAGTCAACAGAATGGGGCCAGGAAATTTAGCAGCGATGGGTACACCACGGAAGCACCATTGGCTGCCCCTCCGACTGATAGTGTGACTGAACAAATTGAGCATGGTGTATATGTCACATTTTCTACATCGTCCTGTGGAAAGAAAGACATAAAGCGCATAAGATTCAGGTGAACCCTCTAAGGCCATATTAGTTTTATATGCTGAATTGCTGATTGTCTGTTCTTTTACTTGACATAACCTGAATTCTTGGCTGTGCAGCCGGAAGCATTTTGGTGAGAAGGAAGCTCAGCATTGGTGGGAACATAACAAGACCAGGGTATATGACAACTACAAGGTTGAACAAATGGCAACACCGTCTGTAACTTTGAGCTGCTCTTCAACACGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016991