BGIOSGA016995

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Revision as of 04:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016995| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016995, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016995

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016995, complete gene.

LocusTag

OSJNBA0013K16.4

Ensembl Transcript ID

BGIOSGA016995-TA

Ensembl Protein ID

BGIOSGA016995-PA

Length

2918

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28350522..28353439

Sequence Coding Region

28350522..28350609,28351005..28351065,28351194..28351329,28351482..28351809,28352591..28352719
,28352925..28353439

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28350522..28353439 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28350522..28353439 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGCGGAGCCGGATCCTTGGAGGCGCGGCCGGGTGTCCTCGTCGTCGGCGCGCCTGGCGTCGGCAAGAGAACCATCCTCTCCCGACTGCTTGCAGCTGAAATACCGGACACACATGACTTGTCATCAGGTGTGCTGTGTCAGGGGTGGAACATTGACACAAAGTACTACTCAGCAGATCTTTCTGTTTGGACGGCACATCTTGGGCAAGGGTTTTCTCTTGATTCCCTCCCTCATCTCGACCAGTTGGATGCTCTTGTTATGGTCTTCGATATGAGTGATGAATCATCCTTCCTTACTCTCCAGAACTGGGTTTCTAGTGTTGATGTTCAGAGGTTTGAAATTCTGTTGTGCATTGGAAATAAAGCAGATCTTGTGCTTGGCCATGGTGCACACGTAGAATATAGGAGGCGTATGCAAAAGATTGGCGAGTCAAGTACTGATCCACATCCTGAATATTTGGATTTTGGGATAAACGAAAGTGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTCCGCTTCACATTGGTGCATTGAACACAATATTGAGTATGTCGAAGCTTGTGCTTCCAATGCTGACTTTGATAAATGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGGAGCCCTTTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACCGTTCCATCCTTGGTTGAGAAAGAAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTACGAAGTTCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTCAAGAGACTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGTGGATGCTGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAACTGCTGAGGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAACACACAAGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATTTGAAGATGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACATGCGCTCCAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGCCATGAAAATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGA</cdnaseq>

Protein Sequence

<aaseq>MESGAGSLEARPGVLVVGAPGVGKRTILSRLLAAEIPDTHDLSSGVLCQGWNIDTKYYSADLSVWTAHLGQGFSLDSLPHLDQLDALVMVFDMSDESSFLTLQNWVSSVDVQRFEILLCIGNKADLVLGHGAHVEYRRRMQKIGESSTDPHPEYLDFGINESEGCGLLSEEEPQIEIRDSASHWCIEHNIEYVEACASNADFDKCLSVNGDSQGLERLLGALSAHMWPGMILKSGNRITVPSLVEKEESTDDESNYEFEYEVLSHGSDEQWEFIGESSTSRDLEGLNEDTATHDKTNQVVDADANSVASNPLPNGRMTETAEEKLVPQSHKSEVSNDMDNTQADASEKLQAGIPEGNKLFEDEHYGLDDLERLMSEIGNMRSNLRLMPDFQRKEMAAKLAMKMATMFGDNDEEGSEDI</aaseq>

Gene Sequence

<dnaseqindica>1..88#484..544#673..808#961..1288#2070..2198#2404..2918#ATGGAGAGCGGAGCCGGATCCTTGGAGGCGCGGCCGGGTGTCCTCGTCGTCGGCGCGCCTGGCGTCGGCAAGAGAACCATCCTCTCCCGTGAGATCTCGCTGCCCTTTTTTTTTTATTATGCCTTTGACGTGTCTTGATTTGGATGCAAAAATATTCGACCTGATGGGATAGCAAAATATGAGGGGGCTTGCAAATTCATCGCGTCGTTGAGGAGATATTCGTGTGATCCTTTGGTATTCTGGGTGAAAATGGGAGTTAATTTCGAGTAGTTGGAGAAGAAGAGCCCCAAGCATGATAGTTTTAGACACTTGTAGATGATAAAAAAAAACAGCATGCTCGTTATGCATCAGATTGACGAATTATTGTCGAAAAGATAATTGAAAAATTACTTGTGAGTTGGAGATATAGATTTATATGTATATATACTTGGCCCTTTCCTGTTTCCATCCTCTTAGTTTATAATAATTTTACATAAACTGCAGGACTGCTTGCAGCTGAAATACCGGACACACATGACTTGTCATCAGGTGTGCTGTGTCAGGGGTATGTGACTGTACTAGCGCAGTTTATTTCCTTGAATGAGTTGCAATACTTAGAGAAGTAGAGGACATAATTTTGAGCTAGCCTTTTGATACCTAACTGGATCTCTTTTGCTATTGATTGTTATCCAGGTGGAACATTGACACAAAGTACTACTCAGCAGATCTTTCTGTTTGGACGGCACATCTTGGGCAAGGGTTTTCTCTTGATTCCCTCCCTCATCTCGACCAGTTGGATGCTCTTGTTATGGTCTTCGATATGAGTGATGTCCGAACTGCATCCCTAATATACATTCTTACATTCTGCTGTTCCATTTTCTATCTTCTATTTTTCTAAAATTTGTGAACTATATAATTTCTGTATCTTATTTTTTTAATCTTTGATAGTACAGTAGGCTAATTGTCTTTGAAATGATGCAGGAATCATCCTTCCTTACTCTCCAGAACTGGGTTTCTAGTGTTGATGTTCAGAGGTTTGAAATTCTGTTGTGCATTGGAAATAAAGCAGATCTTGTGCTTGGCCATGGTGCACACGTAGAATATAGGAGGCGTATGCAAAAGATTGGCGAGTCAAGTACTGATCCACATCCTGAATATTTGGATTTTGGGATAAACGAAAGTGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTCCGCTTCACATTGGTGCATTGAACACAATATTGAGTATGTCGAAGCTTGTGCTTCCAATGCTGACTTTGATAAATGTAAGTAAGTTGTATTGAGGCTGTGATTCTTAAATGTTTTCTCCACATCGTTTTCTTCATCAACACATTTTTTTTAGTTATATGTATGCTACCATATTGAACAGTGGTGTCGTTTAGAAATAATTTTCTGTATGCCATTCATCTGCTTCCATCATAGTGTTTGACTAGATTTCTCACATCTTTCTTTAGTAATGTAGAAGATGCAGGTAGGGCCGAACTTCTGTTAGTAACATCATAAGTTGCACATTCTTAGTTGTTAATGAAGCTGAGTGAGGACATTGAACTTCTTAGTACAAAGGGGAAAATAGTTTCAGCTTCTTTGTAAAATGCTTCAGGCTGAACCATGTTTGGGTTGGTTTAAGTCTTCAAACTCAAATGCGTCTAAAATAAAGCTAAAACCTTTCCATGTGTTGATCCTTTTTTTTTTTAGTTTTAACATATGTTAACCGAGACTTTGAGATTCTTTCTGACAGTTTGGAAACCGAATTACTTAACAGCTATATTTCATTTGATTGAATTGAACTGTGAGTTGCTCTAGTTTGGGCAGTTAAGTTTCACTTTGTCAGATTATTTCTGTTATTTTATGAAGTTATTGTGCAGACCTACATGCTACAAATTAGCCCCATCTATGGTTGTTTTTATTTGTATTCTTTAATGAAAAATTATCATTATTGTGTTGATAATCTCCAATGAAAAAGGACTTGTTCTGGCCAAAGTCGAATATTTACTGGATGTTGGAATGTTTCTTTCTTAATTGACTTATATCCGTGCCTTGCAATAGGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGGAGCCCTTTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACCGTTCCATCCTTGGTTGAGAAAGAAGGTGAGTTAAACCAGACCATTGGGATGAGTTGACGAACCCTGTTTACTTTGTAATATAGAGCAACTTAGGGTGCCATGCTAAGCTGTTCCCTTGCTCAGTAACTTTAACTCTTAAAAGATGCTTACCTATTGAGCAGAACATTTGTTGTTAGTTGTCCAACTAAAATGGTCTATCTTGCCTTAACCATTCTGTTTCCTTTCTACAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTACGAAGTTCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTCAAGAGACTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGTGGATGCTGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAACTGCTGAGGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAACACACAAGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATTTGAAGATGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACATGCGCTCCAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGCCATGAAAATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016995