Os08g0117900

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0117900| Description = Conserved hypothetical protein| Version = NM_001067400.1 GI:115474536 GeneID:4344528| Length = 3854 bp| Definition ...")
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Gene Name

Os08g0117900

Description

Conserved hypothetical protein

Version

NM_001067400.1 GI:115474536 GeneID:4344528

Length

3854 bp

Definition

Oryza sativa Japonica Group Os08g0117900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:983071..986924

Sequence Coding Region

983310..983443,984603..984692,984770..984845,984964..985044,985141..985307
,985398..985836

Expression

GEO Profiles:Os08g0117900

Genome Context

<gbrowseImage1> name=NC_008401:983071..986924 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:983071..986924 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaggggggagaggcaggagggatggtttcttcggttttggggacccctttccaggtttgggtagctttggacaaccagggagcctaatgtcaagtttctttggtggggcaaatccctttgatgatcctttcttcacaaaccctttcggtgctatgatgggacctagcttgttacagccaagcatgtttgggagctttgggtcaagcatgtttgggcctcatggaaatgtcaatggactgagcaatactggaggcttccttcagcaagctcctgaaccaagcaggccgagagggccaataatccaggagctatcttcagatgatgaggatggcgcagatgtgaataaagaagatgagaagaggaatgataaccctaggaagcatccaaggatggcccaaatgccatatgtggaggatcctgacgaagatactgaagataataaaagatctaggcacgagcagtttgaaagggggtatgccagagccagcacatcgcgtccacaacctcatacatttatgtttcagagctcaactgttacgtatggcggtccaaatggagcttgttacacgtcttcagccactaggaggactggtggagatggagttacatttgaagaaaggaaggaagcagacacgaccactggtaaagccactcacaggatttcacgtggaattggcaataagggccattcattgacaaggaaactgagttctgatgggaacgttgacacgatgcaaactttgcacaacttgaatgaagatgagcttgctcgatttgaggaatcgtggcagagaaatgcagtgcaaaatctgtctggttgggatcccagagtgaacatgcttggcactggaactgctcgttctggcatccgagatgggaatcagatgcttacgcttccagcacctggccctggtcaatcccgtggcgccagttcttctaggacgaagaggcccacccagaacacatcttcccgccgcacttag</cdnaseq>

Protein Sequence

<aaseq>MQGGRGRRDGFFGFGDPFPGLGSFGQPGSLMSSFFGGANPFDDP FFTNPFGAMMGPSLLQPSMFGSFGSSMFGPHGNVNGLSNTGGFLQQAPEPSRPRGPII QELSSDDEDGADVNKEDEKRNDNPRKHPRMAQMPYVEDPDEDTEDNKRSRHEQFERGY ARASTSRPQPHTFMFQSSTVTYGGPNGACYTSSATRRTGGDGVTFEERKEADTTTGKA THRISRGIGNKGHSLTRKLSSDGNVDTMQTLHNLNEDELARFEESWQRNAVQNLSGWD PRVNMLGTGTARSGIRDGNQMLTLPAPGPGQSRGASSSRTKRPTQNTSSRRT</aaseq>

Gene Sequence

<dnaseqindica>3482..3615#2233..2322#2080..2155#1881..1961#1618..1784#1089..1527#acacgcgcagctttttgcttctgcaattctctctcctcccaaatcgcgagctcgtcggaagctagggcctcccgctccgatcagatcgccgcgccgccgctgctccaggtatggatggatggttccgttcctccacgagtccgtacgtgcgaatccccccccccctcctgttgctgttagtgttggggtttactcgtgttccgcggcagttttggatcgcgttgctggtagccctctcgatcgtgttagctagtttaggttgctagattttgaagcgatccgagcccgagcagtgtccgcgattgttagggccttcttttttcccatgtggaatattacatggtgaaatgacgcatgatagttgatactcctacttgatagttgatactagctggtcggatggcagtaatgcatggctaactagcaatttccgttgcttgattggtataaaattgatgaagagggaacttctctgcttttttggtaggagtatatggatatggtgtgccagggaaatttttgtagctatacttgctataatggaccataatggataaatgagataaattagttgctgttttgtttcctttaatccctttatgtcattgagcgtgccttttttcggctggtcactatgtttgattctgtagttgatttctgtttaaactttagagttcaaccaatctttcataagtgtatttatttcactatatgatgttaagtaataatagtcctctgtatactttgccatgtgttaagggatcacgttcacatgtgtgtcgtgtgggcgtgtaaccttgtattagaacagatagattagtgctcaagcatgcaggcaaattccaaaaattcagaattgtttggtgtcaggttttcttctatatcctacttattgataaccttgcaatgaaaaaaagctgcatgcctacaatgtgcaggctaattccaaaagtcacattgtatgatgtctggttttcttatagatcctacttattgacgacctaatgatttcgtctaatatatcatataacatagtggtttgtataatgaatatcttttaactgggcagggtacctcaaaaatagaagatgcaaggggggagaggcaggagggatggtttcttcggttttggggacccctttccaggtttgggtagctttggacaaccagggagcctaatgtcaagtttctttggtggggcaaatccctttgatgatcctttcttcacaaaccctttcggtgctatgatgggacctagcttgttacagccaagcatgtttgggagctttgggtcaagcatgtttgggcctcatggaaatgtcaatggactgagcaatactggaggcttccttcagcaagctcctgaaccaagcaggccgagagggccaataatccaggagctatcttcagatgatgaggatggcgcagatgtgaataaagaagatgagaagaggaatgataaccctaggaagcatccaaggatggcccaaatgccatatgtggaggatcctgacgaagatactgaaggttggtttattactttattttatgctgctggtcgttttctagtatgggcttgttgccaaccatgtactgttgttaaaaatcttttagcagataataaaagatctaggcacgagcagtttgaaagggggtatgccagagccagcacatcgcgtccacaacctcatacatttatgtttcagagctcaactgttacgtatggcggtccaaatggagcttgttacacgtcttcagccactaggaggactggtggagatggagtaagtaatcttagcagttttgtttccttcacctatttatttgttctgttggaacttccaaagttgtagtgtttactgtttcttctatatctctaggttacatttgaagaaaggaaggaagcagacacgaccactggtaaagccactcacaggatttcacgtggaattggcaataaggtacttggtaattcagataaataacctgctttattccttccaattagattgggagtgttgttaaagttattattcagctgtttttccatgaataaaatttattattctctcattgcagggccattcattgacaaggaaactgagttctgatgggaacgttgacacgatgcaaactttgcacaacttgaatgaaggttttagccccttctaatcctggaacctttaccatcctcagccgagttgatctgacgttgttttccttttattacagatgagcttgctcgatttgaggaatcgtggcagagaaatgcagtgcaaaatctgtctggttgggatcccagagtgaacatgcttggcactggtacatcctcttgttctcacatgcacaaacagacatggacatgctgcatatgcactgtgtaatactgtagtagaatatgtaatgtgtgtttctggaaacactgaatagaagttatggttcctgtctgttttgtgctaacttatctactacagacagcctgtctgttttgtgctaacttatctactactatcgatcaaatttctcaaaatgggaaagtgtacttactaatgtctaaaccctaaggccttaacccatatcggtcataccttggtgcatccgctcatcaatagtctgaaagaaactcttgaatgttgtaattatcagtccatcactgtaccatggtaggacggtttgtctagatacttcccctaatcctatcttactataaagttataacccactaattttaaagctcaacatgcaaacatgccacctcatcatccactagcaataattacatgcaaaatttatgcaagcttaatctataattcattgaattctacaaatcaacatccaatcatcttccttcacattatttttcacaaaaatttttaacatgtatatatccaccatttttatagtccttaatatatatatattcatccatataattaaagtgtaggatatcatatttcatctacaatctcatataaagtatactaaatgtatttctctcttaacatagtttgacaaattagttttgtgtgttgctaataactaatataattttctacttttagcttgattattaaaaaaaattaaaaattatttaggaatttccgcagcaaagcacgggaatcacctagtattactagtaatatgcattagaaagggcagttttttaatagaatttgctgagtcaaattatgggttcaggaccaataaaggttggaccaatataaaattgcagagcaacacaattgcaggagaatggatgtgtccagagatttttgaatcaaggaatgatggtgatttttatcgtgtttcaatgatcttggttgtgtgtgtccataaatcatgccttttattttatgtacgtgatttgagtcggaacttggcaacttctgtttcgggcttgatttctaatcaaatcttgacaaatgaacttgattcctatagctctgttctcacaaattcttgatctttcacaacaatgcaggaactgctcgttctggcatccgagatgggaatcagatgcttacgcttccagcacctggccctggtcaatcccgtggcgccagttcttctaggacgaagaggcccacccagaacacatcttcccgccgcacttagttccccagtagtatatgcaacatactgtttccacccaaaacaaatgtaactcgtgctcaccttggcaaatgatctgttagtatagtacttttgtgtcgtttctatgctcagcttgcatgcagagctacacgggaaatgtaagaaaagaaaacctgcactttacccaggttggtctctttgtgaccaaaactgtcagtctgtcacttgctggactaagcaatggtacttgctcttaactc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0117900, RefSeq:Os08g0117900