Os08g0118000
| Gene Name |
Os08g0118000 |
|---|---|
| Description |
HMG-I and HMG-Y, DNA-binding domain containing protein |
| Version |
NM_001067401.1 GI:115474538 GeneID:4344529 |
| Length |
3591 bp |
| Definition |
Oryza sativa Japonica Group Os08g0118000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:1006429..1010019 |
| Sequence Coding Region |
1006744..1007212,1008090..1008157,1008706..1008837,1008996..1009157,1009320..1009607 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:1006429..1010019 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:1006429..1010019 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggccaagtcgggggaagcgagcgttgcgccggtggccgtggcgaccgaggcaacggcggcgacggtgagcttccagccgcaggcggcggtggccgagcagggtagctcgagcggtggtgtgctggtgccgccgccgcctatggcggcgggaggaggaggagttgtggtggcggcggcgccggtggcgggggtggtgaaggtggggaagaagagggggaggccgaggaagtatgggccggacgggagcctgatccggccgctgaacgcgacgccgatctcggcgtcggtacccatggcggcctccgcggtggggccctacacgccggcgtcggcggtgggcgccgccatgaagcgcgggaggggtcgccccctcgacttcgcctccacggccaagctccatcaccaccaccaacaccagcaccatcaccagcagcagcagttcggcttccacttcgactccattggtgaaatggtggcttgttctgctggtgcgaattttactcctcacatcatcactgttgctcctggagaggatgtgactatgaaggtcatatcattttctcaacaaggaccacgagctatctgtattctatctgctaatggtgtgatatcaaacgttacactgcgtcaacctgattcctcgggtggcacattaacttacgagggacgttttgagttgctatctttgtctggatcgtttatgcctactgaaaacagcggaacacggagtcggtcaggtgggatgagcgtttctcttgccagcccagatggccgtgttgtcggtggtggagttgctggccttctggtggcagcaagtcctgttcagattgttgtcggaagcttcctaccaagctatcaaatggaacagaagaataagaagcctagggtggaagcggcacccgcccttgcacagactcctcctgctgttccaatctctagtaccgatacgcacagcagcgagcaagggcagcacagctccgtcgccccaagaacaacaaacatcgtaacctcagcatacaacccagaccagagctgggcatctcctgctcagtcgatacctgacagcgcgagaacaccatcgggcgatgtgaaggtcaccgcctctggagcctga</cdnaseq> |
| Protein Sequence |
<aaseq>MEAKSGEASVAPVAVATEATAATVSFQPQAAVAEQGSSSGGVLV PPPPMAAGGGGVVVAAAPVAGVVKVGKKRGRPRKYGPDGSLIRPLNATPISASVPMAA SAVGPYTPASAVGAAMKRGRGRPLDFASTAKLHHHHQHQHHHQQQQFGFHFDSIGEMV ACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGG TLTYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPV QIVVGSFLPSYQMEQKNKKPRVEAAPALAQTPPAVPISSTDTHSSEQGQHSSVAPRTT NIVTSAYNPDQSWASPAQSIPDSARTPSGDVKVTASGA</aaseq> |
| Gene Sequence |
<dnaseqindica>316..784#1662..1729#2278..2409#2568..2729#2892..3179#gctcttgctgctcctcttctcctcgcttcgtcttcttcctcctctcgcctcttcgttgcgagtagagagatttttgttgtgatttttgagggaatatttttggatttttggtttatttttgtgtgggtttttttggaggtgtatttattttgtttttttggtggtgatttatttttgagaggttttaagggattaagggaggtgtgtgaggaagatggggttagtgtgtgtgagctccaatggcgagagctcgtggcggaaaccctactaggttgaggaggaggaggaggtcgtcgtcgcgctcgcgtgtggaccatggaggccaagtcgggggaagcgagcgttgcgccggtggccgtggcgaccgaggcaacggcggcgacggtgagcttccagccgcaggcggcggtggccgagcagggtagctcgagcggtggtgtgctggtgccgccgccgcctatggcggcgggaggaggaggagttgtggtggcggcggcgccggtggcgggggtggtgaaggtggggaagaagagggggaggccgaggaagtatgggccggacgggagcctgatccggccgctgaacgcgacgccgatctcggcgtcggtacccatggcggcctccgcggtggggccctacacgccggcgtcggcggtgggcgccgccatgaagcgcgggaggggtcgccccctcgacttcgcctccacggccaagctccatcaccaccaccaacaccagcaccatcaccagcagcagcagttcggcttccacttcgactccattggttggtatccatctcctactcgcatctcatctctcccccaaatttcctcccaaaaaaaatccataaaacttgatttatttttttttgtcaacccaattctgctcaagagagaatttaattttgattttttagctctgagaaattaattaggcgattagaggaggaggaggagggggccaatggcagaagtagtaattggggttgaggcgtcactacttgtcatgacactgtctgtctgtccctctcttatccgaatatttctttgtctcctcccgctctatccagtatccaccccagtgtagtgttgcgttgcatgatcagatagatggtcagggacctcaggttgttggtgtcctcccaagattcgaagaagcgagtagtgggggccagatggaggcatatcctgaatcctcaaagcctcatcttgttgttattgtggttgcatgcatggtggggctgtgccccgttgtgggggtggcatggtggtggtggttactagttctgtggaactggattgggatcgagatggatcaagcgaagatcctgcgagtcaggatgtacttaggctccggtacctttcgatcaatcatcatccctgtctctgttgtgcttctgccgttgctgatggcaacacgaaaaggccgcgatgtcctggcgaatctggtctttctggcaggttgtacgagctggaatggttggattggagcatgctagcgttgtcaagcatcatgaatgcataaagtactgaaatttcagtgtcatggaaatgtccgcgggctgctgtagtcgcgttgcgcttgttgcaatctcttgagcatttttacctcgtttcgaaattacctgccgtcagtttgttaaccattgtgtgtactggcaggtgaaatggtggcttgttctgctggtgcgaattttactcctcacatcatcactgttgctcctggagaggtatgtaaaaatcaacgttttcttgtgtcttcactggcatcttacattgggttcaattgatcaagatgtatgagttcttgttgacaatgattgaatgtgttctttacttgaatttgattgaataatactgtactacagagcaagtaaaattttcagactgttttgttgaaggttttatggttgtgaatcatatggtttcaggcttttctgcaacatagtgtgattacttgcatcattttatgtattttgaaacattttatgctatatcatgttttatacataaacagatgaaaggcgttttagtttttactgctttgcttagattaggtgggctgcaaaccttgatatgaattttggatatgctcgaattttgtttatcagactggatatgcttctctatgtattatgttttggccttcaagcctgttaaaatgcttctattcttgcaaatatttgcatagttatagctatgctccttattttctaaaattcttctttttgaaagtcttaataatatgtggtactgatgtttgttgcatgtaattcaggatgtgactatgaaggtcatatcattttctcaacaaggaccacgagctatctgtattctatctgctaatggtgtgatatcaaacgttacactgcgtcaacctgattcctcgggtggcacattaacttacgaggtttgtagacctactcttgacatacacagcgatgctttacatgcctttttgtttttgtttcagatctaccatgacatgatttcgtatatttgtctaaagatgaaaattttctgattggccttatggttcccagctgatctcccctatttttattgtagggacgttttgagttgctatctttgtctggatcgtttatgcctactgaaaacagcggaacacggagtcggtcaggtgggatgagcgtttctcttgccagcccagatggccgtgttgtcggtggtggagttgctggccttctggtggcagcaagtcctgttcaggtgctttttcttaccttcaattgagatctgaatggatcccatttttggcagaaacgcattccatgttttgtctgataaatcgagcaaacacggtccatttgttgtactatttatctgtgttgaggtgattgaaatgccatctaatatacatttggattccagattgttgtcggaagcttcctaccaagctatcaaatggaacagaagaataagaagcctagggtggaagcggcacccgcccttgcacagactcctcctgctgttccaatctctagtaccgatacgcacagcagcgagcaagggcagcacagctccgtcgccccaagaacaacaaacatcgtaacctcagcatacaacccagaccagagctgggcatctcctgctcagtcgatacctgacagcgcgagaacaccatcgggcgatgtgaaggtcaccgcctctggagcctgaaactgagatgaactgaccaggatccatgaaattcctggtctgtcactgctgcagccgcacaccatgatcgccggtggcggccaaagatggcttcatttctttctgacttgtaaaagatgtatctgagttccagtaggttttccatcttcaggcagaagagtctaactgcaattgctgtagctgtcccgatattagtcactgtttaagcatcaggctaccctgcttccttgtaacaccatgtcggtcttattggagattggagagttctgtagttacaaaattgtactattagttctgtgtgtgtgtgtgtgtgtctctaggcttctttttcattttgttggattactccacttaatttgctcctggtgtaccccttattaaattagcattagaattttttttcactctaatt</dnaseqindica> |
| External Link(s) |
