BGIOSGA017057

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Revision as of 04:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017057| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017057, complete gene.| tag = B0403H1...")
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Gene Name

BGIOSGA017057

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017057, complete gene.

LocusTag

B0403H10-OSIGBA0105A11.19

Ensembl Transcript ID

BGIOSGA017057-TA

Ensembl Protein ID

BGIOSGA017057-PA

Length

5584

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29245333..29250916

Sequence Coding Region

29245333..29245628,29246512..29246616,29247703..29247836,29247989..29248071,29248288..29248414
,29248737..29248816,29248892..29248978,29249181..29249305,29249408..29249468
,29249671..29249724,29249811..29249888,29250314..29250419,29250519..29250667
,29250809..29250916

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29245333..29250916 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29245333..29250916 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCCGTTGCGTCGGCACCATCAACTGGCGCCTGCTCGACTTCCTCGACCTGCATGTACCGCCGTGCCGCTAGAGAGAAAGGAGGAGAGGGAGGTTGATGCCGACATCGGGGCGGAGAAGGAGGAGGCGGGAGGGGCGACAATCACGCTGGATGCTAATAGTGTTGACGATGACGCGAATGGATATCAAGGGGGCGGCAGCGGGGATGGCCGACCATGGCCACCATATGGGCACCCGCTTCTCTCTGTTATCGGTGCCACTGTCTTGGCTGACTGGGTGAGGCTGTCACGGGGGGGCGATGCACAACCGGACCATTCACGAGGCGGTGGGCTGATGGGTTACTCATTTGGCGGCGTGTCTGCCCAGCTGATCGCGGCGGCCACCCCCACCGCCGGCGGAATGGCTGCTTCGTCCGGCGAATGGCTGAGCCGGGCAGCTATGGTGTTGGTGCTAGGTCTCGTGGTGGCGTCGTCAGCTAAGGCGGGCGATGTGGACATGGTGTTCCTGAAGAGTGCAGTGAGCACGGGAGCAGTTTGCCTGGATGGGAGCCCACCGGTTTACCACTTCTCTCCTGGTTCTGGCTCTGGTGCCAACAACTGGCTGGTTCATATGGAGGGAGGAGGTTGGTGCAGGAATGCCCAAGAGTGTTCTGTCAGGCAGGGTAACTTCAGGGGCTCTTCCAAATTTATGAGGCCACTATCGTTTTCAGGGATAATAGGTGGCAACCAGAGAAACAATCCTGATTTCTATAACTGGAACAGGATAAAGGTCAGATATTGTGATGGCTCATCATTTACTGGCGACGTTGAAACAGTAGAAACTTCGACGAACCTCCATTTCAGAGGGGCCAGAGTTTGGAATGCCATCATTGAAGATCTACTAGCAAAGGGGATGAGCAAAGCACAAAATGCTCTTCTTTCTGGTTGTTCGGCTGGAGGTCTGGCTGCCATACTGCACTGTGACCAATTCCGAGATCTGCTTCCAGCAACTGCAAATGTGAAGTGCTTTTCTGATGCTGGTTTTTTTGTTGATGGAAAGGATATCACCGGGAATGATTTTGTCAGAACATTCTACAAGGATGTCGTAAATCTACATGGATCGGCTAAAAATTTACCATCTTCATGTACGTCAAAGATGTCCCCTGATCTGTGTTTCTTCCCGCAGAATGTAGTGCCAACATTGCGCACACCGTTGTTCATACTTAATGCAGCATATGATGCATGGCAGATCAAGAACGTCCTAGCACCTAGTGCCGCTGACAAAAAGAAGACTTGGGCCAAATGCAAGCTTGATATAACAGCTTGCTCCTCAAGCCAGCTCACAACCTTGCAAAATTTCAGGACAGATTTTCTGGCAGCTCTTCCTAAACCAGAGCAGTCCCCAGCCAATTTGAGCATATTCATAGACTCATGCTATGCCCACTGCCAATCTGGGTCCCAGGATACATGGCTCGCTCAAGGTTCTCCTGTAGTTGAGAAGACGCAAATTGGTAAAGCAGTAGGAGACTGGTTCCACGATCGGGAAGTATCCCGGAGGATTGATTGCCCTTATCCCTGCAACCCAACCTGCAAGAACCGTGATGATGATTAA</cdnaseq>

Protein Sequence

<aaseq>MHPLRRHHQLAPARLPRPACTAVPLERKEEREVDADIGAEKEEAGGATITLDANSVDDDANGYQGGGSGDGRPWPPYGHPLLSVIGATVLADWVRLSRGGDAQPDHSRGGGLMGYSFGGVSAQLIAAATPTAGGMAASSGEWLSRAAMVLVLGLVVASSAKAGDVDMVFLKSAVSTGAVCLDGSPPVYHFSPGSGSGANNWLVHMEGGGWCRNAQECSVRQGNFRGSSKFMRPLSFSGIIGGNQRNNPDFYNWNRIKVRYCDGSSFTGDVETVETSTNLHFRGARVWNAIIEDLLAKGMSKAQNALLSGCSAGGLAAILHCDQFRDLLPATANVKCFSDAGFFVDGKDITGNDFVRTFYKDVVNLHGSAKNLPSSCTSKMSPDLCFFPQNVVPTLRTPLFILNAAYDAWQIKNVLAPSAADKKKTWAKCKLDITACSSSQLTTLQNFRTDFLAALPKPEQSPANLSIFIDSCYAHCQSGSQDTWLAQGSPVVEKTQIGKAVGDWFHDREVSRRIDCPYPCNPTCKNRDDD</aaseq>

Gene Sequence

<dnaseqindica>1..296#1180..1284#2371..2504#2657..2739#2956..3082#3405..3484#3560..3646#3849..3973#4076..4136#4339..4392#4479..4556#4982..5087#5187..5335#5477..5584#ATGCACCCGTTGCGTCGGCACCATCAACTGGCGCCTGCTCGACTTCCTCGACCTGCATGTACCGCCGTGCCGCTAGAGAGAAAGGAGGAGAGGGAGGTTGATGCCGACATCGGGGCGGAGAAGGAGGAGGCGGGAGGGGCGACAATCACGCTGGATGCTAATAGTGTTGACGATGACGCGAATGGATATCAAGGGGGCGGCAGCGGGGATGGCCGACCATGGCCACCATATGGGCACCCGCTTCTCTCTGTTATCGGTGCCACTGTCTTGGCTGACTGGGTGAGGCTGTCACGGGGGTAGGGAGGGGGGAGGGGGGCGACCGAAGAGAGGATACAGAGGATAAAGAGGAAAGAAAGTATGAATGGATGACATGTCGGTCTAAGTCTTTTTTTCTTATTTTCCTAGTGAATGACATGTGGGGACCCAATAGCTTTATTTATTGATTGATTGTTATGCCATGTAATCGTCATATAGACACTACATCAGGTGAAAACCAAATCAACAATGTCATATGGTGCCATATGAGCCAAAAATGTTGTCCAAAGCATTTTGAACCATATTTGTACTGGTTTTGAGAGATGAAAGATGTGTTATAACTTGTTTTGGGGTTGATACCCTCTATCTGATACCCTCCTAGTACATTGAGAAGCCACCCCTGACTGCCGAGTTCCTTACGACAGCCCGTCATGACCATATAACCAGGGCTAAATACGGAGGAATACCCTCCCCAGGAAATTAACTTAGGATTATATACACGCGCGGAGGAATATCCGTACTGAGCTGTCACCATCAGCGGCCCACCTCTCATCCGCAGCATATAACTCATAATCTAGACACCACGCCTAAACTACCAGATACTACTATAATATCATCGTCATGACATAGAGTAATTGCATAAGCAAACATTATACCCGCACCAATGCATCTCCCATATAAGCTAGCAGTATATTCAGTATAACATGAACATAATGTAAAGCTGGCATTCGTATACTCGAAAAGTATTTCAATACCATAAATATATAAAGAAGAGTATTCTAATAATAGTACAAAGCTTACAAAAGAGAAGAGAAGAGGAAAGTTGAGGGATGCGATCGGAACTCGACCCCAAGATGAGGGACCTGAAGTGAACCTTTTCCGTTGGTGAATGTGTAACGGTGTTGGTGCGGCCCATGCTGGCAGGGGCGATGCACAACCGGACCATTCACGAGGCGGTGGGCTGATGGGTTACTCATTTGGCGGCGTGTCTGCCCAGCTGATCGCGGCGGCCACCCCCACCGCCGGCGGGTGCGGCGGCGCGGACGATCCATGGGCGGTGGGCGCGCGGTCGCACATGGTTGATGGGCCAACCATGCCACGATCCCGCGTGGTGTCGAACTGCCACTATTCTTCACCGACGAGCCACGAGCAGTGCAGACATTGGCACACATTGCCACACTGCTTCTAGCTTTACTAGCAGCAGCAGTGTCTTCCTGTTTACGCTCGCAGCAACGCAAAACCATCGTCTCCGGCTCAGGCTCAAGTACCCGAAAACGCGTGCTTTCGCATCAGTTCATCGCCGGAATTAATCCGGAATGTCGGTGTGGAATTCCTTGGGGGCAAACCAGGACGTACGTTGGCTGTTTCATGGACAGGACAAGGCGTTTTGGCTGGTTCCTCTCGCCACACGACACGAGCGAGCAGCTGGATCTTCACGTGAGCGCCACACCTCACGACCGCGGTTTCAGTTTTTTCTCCGGCCACTCCATGGCTCCAAATATGGAACAGTACGAGGCAACCTTGCAATACCTCAGTTCATCTGTGACATCACAGTAGATGTGTTTTTTTTTGTGTGTGTACATGCAAGAAGCCAACCAAGATTTACCATCTGATGAGCTAGTTACGATGCGATGCTTGTGGATTCAGGGAGCGGGCAAAGAATGTGTCCTTGCTATGCAGATGCTGAGATAAGATACTACTCCAGCTGGGAGGCATTAAAGCTCATGATAAAGAGTTACTATTTCAGATTTGCTAGCCAGGGTGCTAAGGGAGTTGCTTTGAGAGCCATCCATATATACTTTGCTTGATGCCCCGTTACTGTCGGCACCCTGCTCTCTCCTCCCTCCCCTTTATTGCTTCCTCCCTCCCTCCCTCCCTCTTCACAGCACAACACGCTGCCACCATTTATGCCACTCCCTCCCTCCCAGCTGTGGTGACAGGACGAGCGTCTCATTCTCAACCTGAGGCTCACCTTCTCTCAGTCATATTCTCCGTCTTCTTCTCCAGTACGCTCGCGTATGTGTTCTTCCCTGCATCCTGCTGATCTATTCTGCCGTGTGTCTCTTTCTGCTTCTTGGGATGTTTGATAGGAAGGGAAGAACGTTGTCTTTGCAGAATGGCTGCTTCGTCCGGCGAATGGCTGAGCCGGGCAGCTATGGTGTTGGTGCTAGGTCTCGTGGTGGCGTCGTCAGCTAAGGCGGGCGATGTGGACATGGTGTTCCTGAAGAGTGCAGTGAGCACGGGAGCAGGTGCAAATGTAGCTTCTGTTAATTCTTCCCACCTCGCAGCATTGCCTATGCAGAAAAACAAAATGAGAATTCCATTCTTGATTTTTTTTTGTGAGCCATGGTTAGATTTTATTTTATTTTTCTTTTTTGGTCCTTGGTTTGTATTGGTGCAGTTTGCCTGGATGGGAGCCCACCGGTTTACCACTTCTCTCCTGGTTCTGGCTCTGGTGCCAACAACTGGCTGGTTCATATGGAGGTAACTAATCTCTAAATTGGTACTACCTCTGTAAACACGAATCAATTTTATGTCACAAGAACGTTCCAAAAAAATAATAATTAAGTCACAAGAATTATATCCTAATAGAGTAATTTTTGTTCAAAATTTTCTTAACAGAACAAAATGCGTCTTATATTTATTTAGATTGTACATTTGGATAATTGAGGTAACATTTTCTTCTACTCGCTTTGGAAGGGAGGAGGTTGGTGCAGGAATGCCCAAGAGTGTTCTGTCAGGCAGGGTAACTTCAGGGGCTCTTCCAAATTTATGAGGCCACTATCGTTTTCAGGGATAATAGGTGGCAACCAGAGAAACAATCCTGGTATGTCACATGCCATGTCTCATGTGCACTTTGCAGTTTGTACCACTCAGCATTTCTATCTTTTCTTTTTTCCTTTTTCTTTTGCCGGGATGACGGAGGAAGAAAGGCCATCCAAATGTTATTTAGATAGTAGGTTGATGCATTTCTGTATCCGCGATAACCGTACTTAATTATGACAATTAAAAGAAGAAATGCAGTGAAGCCTATAGCAGTACATCAAGACATGATAGAAGCCTATAACAGTGTGCTCTTAACATTTTTCAACACATATGCCTTTGCATACCTGAAGTTAAACTTTATTGTGTTATTTCTCATTACGCAGATTTCTATAACTGGAACAGGATAAAGGTCAGATATTGTGATGGCTCATCATTTACTGGCGACGTTGAAACAGTAGAAACTGTAAATTCCTAGACCTGTGGATTGTACATTCAGTTATGTCGTAGAATTGAGATTAACCCCATTTTTGCAATATAGTCGACGAACCTCCATTTCAGAGGGGCCAGAGTTTGGAATGCCATCATTGAAGATCTACTAGCAAAGGGGATGAGCAAAGCACAAAATGTATGTTCAGTGCTGACTGCTGACAACTACTAGTAGTAGCATGCTAATATATTGTTACTAGTAACATCAATTTGGAATTTGACTACAATTAATGTAGAATTGCATGCACAATTCCTACTGCTCTCGCTGCATTGCGCCATCTTCCTGCATAAAGCTTAAATCTTTATGATCATAAGGGATGAAATATTGCAAACCATTCCAGGCTCTTCTTTCTGGTTGTTCGGCTGGAGGTCTGGCTGCCATACTGCACTGTGACCAATTCCGAGATCTGCTTCCAGCAACTGCAAATGTGAAGTGCTTTTCTGATGCTGGTTTTTTTGTTGATGGGTAAGTGTCATTTGGTTGTGAACTTGTCCTTTCATTAATCCATAAATTATTCTCTGATTTATTTTTATCTTAATAGAATGAGTATTGTTATTGTCAATGCAGAAAGGATATCACCGGGAATGATTTTGTCAGAACATTCTACAAGGATGTCGTAAATCTACATGTATGTTGATTTGTGAACTTATAGTGTCTGTAATCCAGATTACCTAATGCTTGGATTTACAAACGACCAAGCTGTATAGTTAAATTCAGTGTCCTGGGAAGAAGTCTGGGGGCAGTCTTTTCATGAAGATTAACAGAACTTATCCAATAATATAATTGAGTGCAGTTTTGCAGATTAATGACCTTTCTTTACTCTCTTGCAGGGATCGGCTAAAAATTTACCATCTTCATGTACGTCAAAGATGTCCCCTGATCTGGTCAGTTTTGGCCTTTGGGCACTTAACTGGGATAAACACTCCTGATTCCTCGTTGAATTTGTGCTAATTTTCGGAAACAACTGCAGTGTTTCTTCCCGCAGAATGTAGTGCCAACATTGCGCACACCGTTGTTCATACTTAATGCAGCATATGATGCATGGCAGGTAAATTTCCCAGCTTCTACCAGTACTGTAAAATTGTACTCTCCGTTTCAAATTACTTACCATTTTAGCTTTGTCCTAAGTTAAAATTTCTAATTTTGACCATCAATTTGTAGAAACTCATATACATAAACACCATATGATTAGGAGTATATATTACGATAGTATTTCTCATGGTGAAACTAAAAACACAAATCTTATGATATTAAACTATATACGTTTTTAGAAATTGATTATCAAAGTTAGAAATAGTTGACTTAGGACACAGCTAAAACAACAAGTAGTTTAAACGGAGGGGTAGTATTTCTCTGCAGTATGTAAGCTTGAGTCTAATCACTTCATTTAAGATAGATAGCACCAACTGACCCTGAATTTATGAGAAGACAAGTAACAAACCAGCACCTTAATATATTTGAATTTAATTGCAGATCAAGAACGTCCTAGCACCTAGTGCCGCTGACAAAAAGAAGACTTGGGCCAAATGCAAGCTTGATATAACAGCTTGCTCCTCAAGCCAGCTCACAACCTTGCAAAGTGAGTTTTTTTTTTTTTGGGTACAAGTTACAACCATCATTCCACTACACGAGTTAATCTTTTTTTTTGTTTATCTAATTCACTTCATTTTCGGCACAGATTTCAGGACAGATTTTCTGGCAGCTCTTCCTAAACCAGAGCAGTCCCCAGCCAATTTGAGCATATTCATAGACTCATGCTATGCCCACTGCCAATCTGGGTCCCAGGATACATGGCTCGCTCAAGGTTCTCCTGTAGTTGAGAAGACGGTAAGTTTGTCTCAAATGCTGAACAGTTTCATCCGAATTCAGAACATAACTAGAACAGAATAGATGCAGAAAAAAAGTTTGCAAAGCCAACTCACAAGTTAGCTACTGACTATAATATGAACTATTTCTACGTGTTTGCAGCAAATTGGTAAAGCAGTAGGAGACTGGTTCCACGATCGGGAAGTATCCCGGAGGATTGATTGCCCTTATCCCTGCAACCCAACCTGCAAGAACCGTGATGATGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017057

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017057&oldid=65951"