BGIOSGA017060

From RiceWiki
Revision as of 04:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017060| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017060, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017060

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017060, complete gene.

LocusTag

OSIGBA0118P15.1

Ensembl Transcript ID

BGIOSGA017060-TA

Ensembl Protein ID

BGIOSGA017060-PA

Length

4672

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29275188..29279859

Sequence Coding Region

29275188..29275316,29276876..29276950,29277307..29277363,29277455..29277615,29277718..29277858
,29278738..29278840,29278907..29279006,29279125..29279321,29279812..29279859

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29275188..29279859 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29275188..29279859 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCCTCCTGGCCGCCGACGCCCAGGTCTCCGCGACCGCAGGCGCCGTCCGTGGAGCGCGCCAAGGGCCCCTCAGGCCTCGACAAGGTCGTGCTCCGCGAGGCGCGGGGATTCTCCGCGGAGGTCCATTTATATGGAGGTCAAGTGACCTCTTGGAAGAATGACCGTGGGGATGAATTACTTTTTGTAAGCAGCAAGGCCACTTTCAAGCCTCCAAAAGCAATCCGTGGTGGCATACCCATTTGCTTCCCCCAATTTGGCACTCATGGAATTCTTGAGAAACATGGATTTGCAAGGAATCGGTTCTGGGCTATTGATGATAATCCTCCACCTTTTCCAACAAGCACTGCTGCTAAAGCTTTTGTTGATCTTATTCTGAAGACTTCTGAAGAAGATCTCAAGATATGGCCTCATAGCTTTGAATTCCGATTAAGAGTTGCTCTTGGGCCTGGAGGAGATTTGGCTCTCACTTCTCGAATAAGGAACACCAACACTGATGGAAGACCATTCTCATTTACATTTGCATACCACACGTACTTCTCTGTATCTGACATAAGTGAAGTGCGCATTGAAGGCTTGGAGACACTGGACTACATTGACTGTCTGAGGGGAAAAGAGCGATCCACAGAGCAAGGGGACGCTATTGTGTTCGAATCAGAGGTTGACAAAATATATCTAGATGCACCAGCAAAAATTGCAATCATTGATCATGAGAAGAAACGGACATTTGTCTTAAGGAAAGACGGGCTTCCAGATGCTGTTTTGTGGAACCCATGGGACAAGAGGACAAAAAACATGCAAGACTTTGGGGATGAAGAATACAAACATATGTTGTGTGTTGAACCTGCAGCCGTTGAGAAGCCCATTACCTTGAAGCCTGGCGAAGAGTGGAAAGGAAAAATGGATCTCTCCGCAGTTCCTTCCAGTTACTGTAGCGGGCAGTTAGATCCAAATAAGGAACACTTAATGTCACTTATATTATCTGGTGCTGATGCTGCATCTTAG</cdnaseq>

Protein Sequence

<aaseq>MATASWPPTPRSPRPQAPSVERAKGPSGLDKVVLREARGFSAEVHLYGGQVTSWKNDRGDELLFVSSKATFKPPKAIRGGIPICFPQFGTHGILEKHGFARNRFWAIDDNPPPFPTSTAAKAFVDLILKTSEEDLKIWPHSFEFRLRVALGPGGDLALTSRIRNTNTDGRPFSFTFAYHTYFSVSDISEVRIEGLETLDYIDCLRGKERSTEQGDAIVFESEVDKIYLDAPAKIAIIDHEKKRTFVLRKDGLPDAVLWNPWDKRTKNMQDFGDEEYKHMLCVEPAAVEKPITLKPGEEWKGKMDLSAVPSSYCSGQLDPNKEHLMSLILSGADAAS</aaseq>

Gene Sequence

<dnaseqindica>1..129#1689..1763#2120..2176#2268..2428#2531..2671#3551..3653#3720..3819#3938..4134#4625..4672#ATGGCCACCGCCTCCTGGCCGCCGACGCCCAGGTCTCCGCGACCGCAGGCGCCGTCCGTGGAGCGCGCCAAGGGCCCCTCAGGCCTCGACAAGGTCGTGCTCCGCGAGGCGCGGGGATTCTCCGCGGAGGTAATTAACAAACCAGCTCGATCGCGCGCCCCGCTCCCTTTCGGTGCTTCTTTCCCAGTTCGATTCGAGGCGCATTTGCGCCGATCCGGTTTGGGGTTTAAAGCCTGCGCGTGTGTGCAGCTTTTGCTGAGGGGGGAGGGGGGGGGGGGGGGATTGGGAATTTCTGTTGCAAATGAGCGGTTTGTGTGATTTGGCAGATGAATAACTGGCGCATTACGCGATCCATGCTGGTTAAGTTCAGGCTTACTATCATTTTAGCATGTTAAATTTGCTGCAAAAAGGCAAATTTTCCGATGTTTATCTTTGGTGCTGTGCTTTATGCCATCTTCATATTACGGATGTTCAATCAATCAAGGGTGTTAGCTGTAATTAAATTTCCGGAATTGGCCCCAACCATATAAGGGATGTGATTTTCTGAAATTAAGAGATGCTTTTGGCCCCCGCGATGAAGTGGTGTAGTTTTGATCACACGTCACTGTGCCATTCACTACTTGATACCCGGATTGTAAAATATGATAGTGAAAGACTTAAAGTAATATACGGACAATTCTCTTGTTGTGGAACCTACCTAGTGGGAGACGCACCGACTATGCTACTTGAAAGCGAAAGGCCTAGGTTATCCTCTTCTATATTTCTAAGATGGATAATCCTTGGATGTTGCGTTTGATGCTATACGCATTTAATTGCCCTTGTTGTACCGACTATGCTACTTGAAAGTTTGTCATTTAACATTATGGCGTATCCTTGGACTTGGTTCAGTTGCATATCATGAGAAACTGGGACTAAATATAGAATTCTGGAGGTGTTGGATTCTGTGAACTCAATTCTGCTATAGATAACTCCATAGTTTCAAGCTAAACTCAAATTGGTTCCTTTTTTCCTGTCGTGTATTTGTTGCAATGGAGGGGACAGAGATAAAAGGCCAATATGAACTTCCTTTTCTGTTAATCTTTCTCCTTCTCCTTCTGGCCAAAGTACAAACTACTCCTGCATACATCTTAGAGCATAGCTCATTCAGAGTCACAAGGCAGAACAAAAAGGTGAAACTAGGTCTCAGTACAAGTATTCACTAATTATATGATGCCGCGAAGTGTGTTAGGGACAAGAAATGGTAAGTAATCAGGGCCAACAAGTGATGAGAAGACATGGTTGTGTGGTGTGGAGCTACACAACGCTATTGTTATAATGGGTGAATGAGTTATATCGTGACAAGTAGGTGTTTAGGTGAGTCTTAGTGTTATCCAGCTATTTCTGTGAATCCTTCTTGCCTCTTGATACAGTAATTAGCTAGCTTTGTTACTTCCAAGTTTTCTAAACTTCCCTTTGGGTATCATGCTTGAATGTAACTAGTTTTTCTTATCTCACATTTTAAATTGTATTGTGTTCTTGCTGATGTAATTTAGTTTTTTTTTATCCGAACTCAAGGTTTATCAATATGGAAGAAGACAACTCTTCATGGACTGGGCATTGACCCTACATGAAAATTTATTATTGTTATCACTTTTTTATAAGTCAGGCTTTAACTCCTGTAGCTAATCAATTATCTTGTCTTTTGCTAGGTCCATTTATATGGAGGTCAAGTGACCTCTTGGAAGAATGACCGTGGGGATGAATTACTTTTTGTAAGCAGCAAGGTATGAAAGCAGTAATGAGGTCGTGGATGACCTCATTGGCTAGGTTATTAGTTTGTTATATAGATAAACTTGCATGAGATGCATTGGCACCACATCCCTGTCATCCTTGTCCCCAGACCCACTAATAAAATTGGCCATTAATTAGAAAAATATATATCCCATTTTATTTCATTAGCACATTCTTAGGTCAAGACCCTTGGATATCTTGGCCCTTCTATTTTTCTAATTGTTTCTTCTGCTCCAATTGACGTGTGTCCAATTAAGTGACAATGTGATGTAATATCTGTTTGGGACTGCTACTGTTTTTAATCATCACATTTCCAAACCGGTGTTGAAATTAAATTCTTCCTTTTCAGGCCACTTTCAAGCCTCCAAAAGCAATCCGTGGTGGCATACCCATTTGCTTCCCCCAAGTATGGCAATTTCATTTATAATAACTTCTCGTATGTTCATGCTAAAAAAACTTGCCTGCCAGAATCATCCAAAGGAACCATATAAATGCAGTTTGGCACTCATGGAATTCTTGAGAAACATGGATTTGCAAGGAATCGGTTCTGGGCTATTGATGATAATCCTCCACCTTTTCCAACAAGCACTGCTGCTAAAGCTTTTGTTGATCTTATTCTGAAGACTTCTGAAGAAGATCTCAAGATATGGCCTCATAGGTTTGTGTTATCCAGCTTATGCTTTGTTCCTTTCTTTGTGTGCATGTTAGTCTCAATCCCCTACTTTTCCTCGTGTTTCTTTGAACAAATAATGGCGTGCAGCTTTGAATTCCGATTAAGAGTTGCTCTTGGGCCTGGAGGAGATTTGGCTCTCACTTCTCGAATAAGGAACACCAACACTGATGGAAGACCATTCTCATTTACATTTGCATACCACACGTACTTCTCTGTATCTGACATAAGGTGTGTGTGCTGCATTCAGCTCCCTTTGTTCTGTTATCGGTTCATACATTTTCAATATGAAACTTATTTAAGGTTGCAGAATTGGAAGAGTGGAGTTCTGTTGTGCAAGACTTTTGGTGGTATATTATTAAATTTTACTTGCTGGGTATTTTCAAAGGGGTCATAAGCATGACCTATGTGCCTTTGTGCCATTCAAGTCTGGTAGATGCGATGTATTTTTTAGGAGCCACTGTACATATGTGGCTACTTCTTTTGATGGGGATATATCATCTGCAAATTCTGTAATTACAAATTCTATTTCACTAGGTGTAAAAGTTGGGACATGCTATTTTCTGTATTTTAGGTTGTATAGACTATAGATAAAAGGAAGTTGGAAGCACATGTTAGAACAAATCATTACAGGTTCTCTCTTTTTTGGCTAATAAACATGTTCAATTAGTAAAGAAGATGTTGCAGAATAGTAACTGTATACTTTAGTGTTAATACTTTTTTTCAATCTGAAGATTCAGTCAATAGAGAAGGCTCACTAGCATTATGGATGGAACTTTTTTTTTTTTTAGTTCAGTGCAGAAGCATTGATAAATTTGTAATCTGAAGCTCTTGGGAAAAAATGTAGCCAAGTAGCTGCTGTCATCGGTTAAAGCAAATGGTGATTTTTTTTAGACATAAGAAATATATTCATGTGGGCATTTCAGCCTTTGATAGAGTGTTGTAAGGACCAATGGTGATTCATGCAATTTCGTGGCATGTGCAACTGCTTGGTTTGTGAACAATGTTAAGCATGTTCAGTCATATTTTTTATATATGTACCTTTCTCAATGTTTGGAACTTGGGAATTCAATTTTCTTCCGTGCTTACCCAAGCTGCAAACTACCTTAGTGAAGTGCGCATTGAAGGCTTGGAGACACTGGACTACATTGACTGTCTGAGGGGAAAAGAGCGATCCACAGAGCAAGGGGACGCTATTGTGTTCGAATCAGAGGTAAAGTAAGCCACTTAAATGCTATAAATGATACTACATAGACTGATCTGTAAATGATACCTTCAGGTTGACAAAATATATCTAGATGCACCAGCAAAAATTGCAATCATTGATCATGAGAAGAAACGGACATTTGTCTTAAGGAAAGACGGGCTTCCAGATGCTGGTAAGCTTATTTATCACAGTAATTTTCTTTTGTTAAAGAATATGATTGTAGATCTTTGTATCCAGCTGTATCAAACACCAATTTTTGCCTGTCAGCGTGCATACTTTTGCCTGTGTAGTTTTGTGGAACCCATGGGACAAGAGGACAAAAAACATGCAAGACTTTGGGGATGAAGAATACAAACATATGTTGTGTGTTGAACCTGCAGCCGTTGAGAAGCCCATTACCTTGAAGCCTGGCGAAGAGTGGAAAGGAAAAATGGATCTCTCCGCAGTTCCTTCCAGTTACTGTAGCGGGCAGTTAGATCCAAATAAGGTTCTTCAAGGCTGAGAGTTCTAATTTACTACACCATGTACAGGTAACGGACTAACGATGTACTTATTCGCTCTAGCTGTGCAATTTTGTGGTGGCTTGGCTGTGAATTTAGAAGTAAAGATACTGTAATTGTAACAGCAGGCACAGATAAGCTGAGTACTCCACCATGCCTTACAGTTCTCTAATGTAGAGAGACAGGAAGTTTTATTAGTATTGGCTGTTGAAGCAATCTATCGCAGTGTCATGTAGCTGATCGCAGAAAACATTAGTAATTTAGTACCTCGTGCTTAAGAGTCATGTACCATCATTTATGCTATGTTTTCATTACATGTCCAACCAGGTTTTGGAGAAATCAGTACAACCAAGAAATATATCGAGTTATTAATTCCATAATAAGTATATAGTATTTGCTCTCATCTTATACTCCATATTTGGTACACATTTTTTTGGTAGCTTCTGCTTTGTTTCTAATCTGTGACTTGTTCTGCAGGAACACTTAATGTCACTTATATTATCTGGTGCTGATGCTGCATCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017060