BGIOSGA017075

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Revision as of 04:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017075| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017075, complete gene.| tag = B0402A0...")
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Gene Name

BGIOSGA017075

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017075, complete gene.

LocusTag

B0402A04.2

Ensembl Transcript ID

BGIOSGA017075-TA

Ensembl Protein ID

BGIOSGA017075-PA

Length

5711

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29642921..29648631

Sequence Coding Region

29642921..29643367,29643656..29643807,29644125..29644247,29644439..29644583,29645231..29645292
,29645572..29645785,29646870..29647784,29648026..29648275,29648363..29648631

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29642921..29648631 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29642921..29648631 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCCGCATCACCGCGCCGCCGCCGCCGTCCTCGCCGCCCTCATCCCCGCCTCCCCTCCGCCACTCCCCCGCTGCCCTGGGCACCCCGCGCTCCCGCCGCCGCCACTCGCCTTCCCCGTCCCTCGCGCTCACCCCGTCCTCCTCCGCCTCCGCCTCCGCCTCCGCCTCCACCTCGTCGAGGCCCAAGGTGCGGCCGTCGCCGAGGAGGGCCTACGCCGCGGCTCAGTGGGTGGCGCTCCCCTCTCACCCCGCATTCTCCCGCGGGGACGGCGGGGAGGGCCTCGGCGGCGGCGGTGGCGGCGCCGCGTGGGATGCGTCGGCGTCGCGGCTGTACGTGTGGGACCCTTCGGCGCGAGGCGTACACCGGATATGCGTGCGGGTTCGCGATGCGGAGGCGGGGAAGGACGGGGATGATGTCGCCGTGGAAGCCGCCGTGCCTTCCGAGATGTTGATGCCGGAGACTGATCTTGGTTACAAGGTCACTCATTTATCACTTAATACCGACGGTTCATCGCTACTACTTGCTGGATCACATAACATAAGTATTCTGTATGTGCATGAGAGGGTTTCTGAAGATGGTGATAAGGTCATATGCAGGACTGTGCCAGTTGCTTCTCAGATCTTACCTAGCAACAATGATGGCATCAAAGTACTGCAAACATCGTGGCACCCTTTTAGCAGTAGTCATTTTGGAGTCTTGACATCAGATGCTGTTTTCAGGTTATTTGATCTGTCATTTGATTTAGAGCAACCAGAGCAGGAGTTCTATTTGCAACCAATTCTACCTGGCAAATGCCAGAATGCTTCATCAATTTGTCCAGTGGCATTCTCATATGGGAGTGATCATCTGTGGGATAGATTTTCGGTTTTCATCTTATTCAGCGATGGTTCAATTTTTGTGCTCTGCCCCATTGTTCCATTTGGAAGCGATTACAATAAGAAGCATATTCAAGAAATATATGAAGATGTTAATTCATTTGGATTGAAATCCTCAAACCAAAATGTTGTCACCAACTCACGTTTGGCAATTGCTTGGTTGGAAGCAACGTTTCCTGACTTGTCACGTCAGCCAGCTGATAATAGTGCATTGATGTCTAGAGCTCATCCATACGCATCATTAGATGATTCTCTAACTTTACAGGGACCTCTTTGTAGAGTTTGCGAAGAAAACAATGAACCTGAAAGCAAGAGCAACTCTTGTGAAGGCAAAGCTGTGGGTTTTGTGTATAGTTCTGTTGGCAAAGATTCCATTCTTGTAACTGCCTGGGGTAGTGGGCAACTCCAGATTGATGCTCTTGCTGATGAAATTCAACCACAGTGGAGCATAGGAATTCCTACCCGCCTTAATGTTGATTCACATGGGCAGATAAAGAGTGTTGCTATGATATGTGACTCTAATTCAGAAGATTCTTGGGCCATGCGATCGTATCGCCCGTCCAGTACGGGATCAAATGTGAAGAGTAATACTGATGCTGTCTGGATGGGGCATTCTCCTCCTTTGCTAAGACTCGCAATTGTAGATTTAGCACTAGCAAAAACTTCCAATGATAGCTCTTTATCATTGTTTCTAGATCCCCTTGTTCCAGAGAGATTTTATTGTGCCCATGGTGGGGGACTTGACATGGTCACACTGCACTTCCTGCCATTTTCATACCCTGAAATGGCATCCACTCCACCCTCTGTGCATCCTATCCTCACTACAGGAAACAATGAGGCAAATTCTCCCTTCCTTTCTGGTTTTGTTACCATAGCAGATGCATATGGCCATGTGCAGTTAGTCAGCATTACATGCCCAGGTGAGTGCTTTGTGGTGGAGATGAAGGGTTGGAAGGAACCAACGCCTCTTCAGCTTGACATAGACAGCAAGAGCATTAAGGACGTGGAATCTTTTACAACTGGAATGATCAGTAAAGAGCTCATCGCAGGTCCAGATCCACCCATAGTTCCATCTTCATCAAGCTTGAGGTCATTGACCCCTGACTCTATTGAAGGAAAATCCACTCTTCATCACTATATTAAAGTTTTCCATGAGTACTACGTGGAGTATGGGCATAAGGTTTTCATTGAGCTCAAGGAACATGGGGATTACCTGAAGACAGAAATTGAGGACAAGCAGAAACGCTTGCAAGCAGTGAAGCAATCACTTCTATCCATAGAAGCCAAAGACCAAGATATAAACAACCGGATAAATCGGGCCTTTAAGGTATACGATTTGTTAGAAAAACGCATCGAGGGCTTCAAGATACTTCCTGCGGCAAACAAGAAACCATTGTCACAAGCAGAGCAGGAGTTCAAAGCACAGCTAGATAGGTTTGCAGATGTGGAGCTGGATGCGTTGTGCTCTTCAATCACTGCTCTGAGTGCGAGGATGAAACGATTTGCTCACCCGGCCATTGGCAGTGCGGCTGGTACAGGAATGTCAACATGGCAGACACCAAAGGTCGGAAGAAGCCATGTTTCGGACTCCCAGATGTCGTTACTAAAATCTTCGCTTGAGAAGCTCTCTCTCCTTAATGAGGAGAACAATGTAAAGCTGAGGCTCATTGAGCATGAACTCAAGAACCAGGAGCAATAG</cdnaseq>

Protein Sequence

<aaseq>MTRITAPPPPSSPPSSPPPLRHSPAALGTPRSRRRHSPSPSLALTPSSSASASASASTSSRPKVRPSPRRAYAAAQWVALPSHPAFSRGDGGEGLGGGGGGAAWDASASRLYVWDPSARGVHRICVRVRDAEAGKDGDDVAVEAAVPSEMLMPETDLGYKVTHLSLNTDGSSLLLAGSHNISILYVHERVSEDGDKVICRTVPVASQILPSNNDGIKVLQTSWHPFSSSHFGVLTSDAVFRLFDLSFDLEQPEQEFYLQPILPGKCQNASSICPVAFSYGSDHLWDRFSVFILFSDGSIFVLCPIVPFGSDYNKKHIQEIYEDVNSFGLKSSNQNVVTNSRLAIAWLEATFPDLSRQPADNSALMSRAHPYASLDDSLTLQGPLCRVCEENNEPESKSNSCEGKAVGFVYSSVGKDSILVTAWGSGQLQIDALADEIQPQWSIGIPTRLNVDSHGQIKSVAMICDSNSEDSWAMRSYRPSSTGSNVKSNTDAVWMGHSPPLLRLAIVDLALAKTSNDSSLSLFLDPLVPERFYCAHGGGLDMVTLHFLPFSYPEMASTPPSVHPILTTGNNEANSPFLSGFVTIADAYGHVQLVSITCPGECFVVEMKGWKEPTPLQLDIDSKSIKDVESFTTGMISKELIAGPDPPIVPSSSSLRSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKVFIELKEHGDYLKTEIEDKQKRLQAVKQSLLSIEAKDQDINNRINRAFKVYDLLEKRIEGFKILPAANKKPLSQAEQEFKAQLDRFADVELDALCSSITALSARMKRFAHPAIGSAAGTGMSTWQTPKVGRSHVSDSQMSLLKSSLEKLSLLNEENNVKLRLIEHELKNQEQ</aaseq>

Gene Sequence

<dnaseqindica>1..447#736..887#1205..1327#1519..1663#2311..2372#2652..2865#3950..4864#5106..5355#5443..5711#ATGACCCGCATCACCGCGCCGCCGCCGCCGTCCTCGCCGCCCTCATCCCCGCCTCCCCTCCGCCACTCCCCCGCTGCCCTGGGCACCCCGCGCTCCCGCCGCCGCCACTCGCCTTCCCCGTCCCTCGCGCTCACCCCGTCCTCCTCCGCCTCCGCCTCCGCCTCCGCCTCCACCTCGTCGAGGCCCAAGGTGCGGCCGTCGCCGAGGAGGGCCTACGCCGCGGCTCAGTGGGTGGCGCTCCCCTCTCACCCCGCATTCTCCCGCGGGGACGGCGGGGAGGGCCTCGGCGGCGGCGGTGGCGGCGCCGCGTGGGATGCGTCGGCGTCGCGGCTGTACGTGTGGGACCCTTCGGCGCGAGGCGTACACCGGATATGCGTGCGGGTTCGCGATGCGGAGGCGGGGAAGGACGGGGATGATGTCGCCGTGGAAGCCGCCGTGCCTTCCGAGGTGAGGTCGTTTCCTCTTGTGGTTGTGTCAGTTCTCACTTGTAAAAGTGATGCAATTCCTTTCTAGACACTGAACTGGAGGCATTTGTTTGAGTTTTCACGTTTGTGAATTAGGTCAACTTGCAATTCACTAACAAATGTTGTGCTAGTGAGTGCAAAAAATGGAATTCTTAGTGTCGCCTAGGGGGTTTGTAGTTTAAAATGTGTTGCAGGAAATAAACATATCGTGTCATGCTATTTTTGATACTGGAGGTAGTAATTAGTAGCTGATGTTGCCTATGCTGTCCAGATGTTGATGCCGGAGACTGATCTTGGTTACAAGGTCACTCATTTATCACTTAATACCGACGGTTCATCGCTACTACTTGCTGGATCACATAACATAAGTATTCTGTATGTGCATGAGAGGGTTTCTGAAGATGGTGATAAGGTCATATGCAGGTACATAAGTCCACTATAGCTTTATCTTATGTTATTAGTATTGTACTGGTATTTTTCCCGACCATCTTGCAATTATTTAAGCTGCAATAGGTTGTTGCATATATACATGCAGCATATTCATAGCCGTGAACACTAAGAGTAGGTTTCTCTGAGTACTCTTATCATCAGGGTATTGAAGAACGCAACTCCAAAATTTTATTTCACCTTGCTCTTTAGATTTATGACCTGAATCATTATTTCTCTTCCTTTTTTTAATATCATTACTCATATCTTCTTTCTTTCATTGTATTGACTTGTACATATGGACCTTACAACAGGACTGTGCCAGTTGCTTCTCAGATCTTACCTAGCAACAATGATGGCATCAAAGTACTGCAAACATCGTGGCACCCTTTTAGCAGTAGTCATTTTGGAGTCTTGACATCAGATGCTGTTTTCAGGTTTGATAAATGAGTATCGATGCTAGATGGAGGAATTCCACTTTATCTATGCTTCCTTGCTATTTATTGGATTTGATTGGAATGGAAATACGTCTTTTACATCCACACTTAAATTAATTGAAGACAACACTTGCTTTTAAAAATAATTATTGCATGACCCTTTTATAGAAGTTTTGTTATTATTTCTGCAGGTTATTTGATCTGTCATTTGATTTAGAGCAACCAGAGCAGGAGTTCTATTTGCAACCAATTCTACCTGGCAAATGCCAGAATGCTTCATCAATTTGTCCAGTGGCATTCTCATATGGGAGTGATCATCTGTGGGATAGATTTTCGGTATGTTTCTTGAATATTGATCCCCTAAATATTGTAGAAGTCATCTGGAAAAAAATATAGTAAATGATCTACAGTGTCTTTATTAGCTGAAAACAAAACCAGAATGATTTTTCATCCGATGGGATTGTTTTGTAATTTAGCAAGCAATATCATAGCATAGTTAATATTAAACCACAAAATAGGATATTAGAGTCCTACCCGAATTAGCCTTATAGAATCTACTCCCTCCGTCCTACAAAAAACCAACCTAGGTGGTGTCCCATCCCCACCTAGGTTGCCTTTTTTTGGGACGGAGGGAGTACTTGTTTGCTTCACACATGGGATTAACCTTGTAGTTTCTTTATTTACATCTGTAGCAAGATTTAGGGTGTCACAAGTCATATTACTACATAAATGAACTTGGCAGCTGATTGCATGGTTTCTACGCCCAAACCCTTTTTTTCTGGAACATCTAATAATGTTTGTCCCCACTATTCATGAAAGAGTTACTGGAATACTTTTGATACTTTATGCATCACTTTCTTTCATGTCACCTTTTCAATTGGTTGTTTCGACATATGTAATATTTTTAGTAGTTTCGGCATACTTCGTATGTTTAATGGCTCATTTATGTGCTTAATTTCACATGTAAGCCTGTCCTTTTACAGGTTTTCATCTTATTCAGCGATGGTTCAATTTTTGTGCTCTGCCCCATTGTTCCATTTGGAAGGTAAGTATTGCATTTATTTCTGCCCTCCCCCACCCCTCTTTTCTCTCTATTGGGAAGAAGGCTTACAACAATTTGACAGCATGATGGTCCTAATTTGTTAAAACAAAAAAAATACTGTACTAATTTTGTTTATGGGAAATAAATTATGGTCCCTGCAGTTTCACACTTTCACTTTGTAGTCTTGTATTTATGAAATGCGACCTTAATGATATGATCATATGGTGCCCTTTCTTTATCTGCATATTGGTTTTGACTTTATTTTTTTTCCCTGTGATGCAGCGATTACAATAAGAAGCATATTCAAGAAATATATGAAGATGTTAATTCATTTGGATTGAAATCCTCAAACCAAAATGTTGTCACCAACTCACGTTTGGCAATTGCTTGGTTGGAAGCAACGTTTCCTGACTTGTCACGTCAGCCAGCTGATAATAGTGCATTGATGTCTAGAGCTCATCCATACGCATCATTAGATGATTCTCTAACTTTACAGGTCTGCTTCTATTTGACTTGGTGAAATATTGTTCGAACCAAAAGCTAGTGGACTATGCTAATGCAATGACCAGAGAAATGTGAATTTGGTGCTCATGCAGCTGGTCATAATCAATCCATTGTTTTTTAGTATATGAGATTTATTGTTTTGTAGGAGTTAGGAGCTGATTGGTTTGCGACCAGACATTTCCACAACTTGCATGTAGCGGCGGTGTCTACCGCAGACATGTACCGCATTCACATGTCTGCATGAAAACTTTTGTGCTAGTACGATTTGCTGCCACAGTTTGGAATTGGTAGTGCGCCCCAGGGTTCACCTTTCTGATCGAAAACCGCAAAAGCCGCTCGGTTTTCGTGAAACTGTTGGGGATTGGTTTGTGAAAATTGAGTGTTTTTAGATGGTTTTCATACGGAGTTGACCAAATTTGTCAGATTTTACCCGTTTTTGCTTAGTTTTTGGTAAACCGAAAGTGGTTTTCACCTTGAAAATGGAAATGTGAACCCTGGTGTGCACAAGATTTGCGCTTCATTGGCTCAAGAATGGCCATAATTACTATTGTACTCAGTTTTGGTCATGACCTAAACCATGGATTAAGTTGTCCAGATAGTTCCCATGTTTTTCTGGGCCAGTTCGCAATGGCTATGACAGAAAGAAAGGAAAACAAGAGACAGCACTAACTAAAACTTCTGTCTTACAAAATCATGTATGATTTTTTTGACCGGAAAACATTAGGGGAGGCTATTTGACTTTATTACTCTAGGTCTACAAAATTCTGTAAATTAGTTTCTGGTACTGAATATGGAATTTCTTGAATTAATAAACAACCGCAAATCTGGTACTTAAGATATTTTTTTATTACCATTTTTTTTGTATTGTTGTAATGTATTGATGTAGTTTGTACTTTGTGAAAGAGAAATTATCAAAATACTAGACTAGCTTACTTGGTAATTTTTGTAGAACTGGACAATCATTCTTGATATGACATCTGATAATCCAAACTATAGCTACCTATTGTCAATGTACATGTAACTATCTTCTACATTTTTGTCATTAGTAAATATGATTTGATTGATACTCCATGCAGGGACCTCTTTGTAGAGTTTGCGAAGAAAACAATGAACCTGAAAGCAAGAGCAACTCTTGTGAAGGCAAAGCTGTGGGTTTTGTGTATAGTTCTGTTGGCAAAGATTCCATTCTTGTAACTGCCTGGGGTAGTGGGCAACTCCAGATTGATGCTCTTGCTGATGAAATTCAACCACAGTGGAGCATAGGAATTCCTACCCGCCTTAATGTTGATTCACATGGGCAGATAAAGAGTGTTGCTATGATATGTGACTCTAATTCAGAAGATTCTTGGGCCATGCGATCGTATCGCCCGTCCAGTACGGGATCAAATGTGAAGAGTAATACTGATGCTGTCTGGATGGGGCATTCTCCTCCTTTGCTAAGACTCGCAATTGTAGATTTAGCACTAGCAAAAACTTCCAATGATAGCTCTTTATCATTGTTTCTAGATCCCCTTGTTCCAGAGAGATTTTATTGTGCCCATGGTGGGGGACTTGACATGGTCACACTGCACTTCCTGCCATTTTCATACCCTGAAATGGCATCCACTCCACCCTCTGTGCATCCTATCCTCACTACAGGAAACAATGAGGCAAATTCTCCCTTCCTTTCTGGTTTTGTTACCATAGCAGATGCATATGGCCATGTGCAGTTAGTCAGCATTACATGCCCAGGTGAGTGCTTTGTGGTGGAGATGAAGGGTTGGAAGGAACCAACGCCTCTTCAGCTTGACATAGACAGCAAGAGCATTAAGGACGTGGAATCTTTTACAACTGGAATGATCAGTAAAGAGCTCATCGCAGGTCCAGATCCACCCATAGTTCCATCTTCATCAAGCTTGAGGTCATTGACCCCTGACTCTATTGAAGGAAAATCCACTCTTCATCACTATATTAAAGTTTTCCATGAGTACTACGTGGAGTATGGGCATAAGGTAAGAAACTGTCACCATGATACTTTGCATATAACTCTTATCATATTCACATATTTCCAGACCTCAGAACATGTCATTTGTCATTGTTGGTGAATGGTTAGCGGCAACTAGAATTAATAGGACCTGCAGATGCCCAAATCCCCAAACCTATTAGCTATAAATGTACCATCACTAATCAGATGAGAATAAATGGGAGTATAGGCAAACATAATGATCAAGATATTATTTTAATGATTCTTAGGTTTTCATTGAGCTCAAGGAACATGGGGATTACCTGAAGACAGAAATTGAGGACAAGCAGAAACGCTTGCAAGCAGTGAAGCAATCACTTCTATCCATAGAAGCCAAAGACCAAGATATAAACAACCGGATAAATCGGGCCTTTAAGGTATACGATTTGTTAGAAAAACGCATCGAGGGCTTCAAGATACTTCCTGCGGCAAACAAGAAACCATTGTCACAAGCAGAGCAGGAGTTCAAAGCACAGCTAGGTCTGTAGTTGAGAAAGGTGATCTTTAAACTCTTCGAAACAGTTTCATTTGCTAACATTATTTGGATCCGCCTTTTCTTTTTTGCAGATAGGTTTGCAGATGTGGAGCTGGATGCGTTGTGCTCTTCAATCACTGCTCTGAGTGCGAGGATGAAACGATTTGCTCACCCGGCCATTGGCAGTGCGGCTGGTACAGGAATGTCAACATGGCAGACACCAAAGGTCGGAAGAAGCCATGTTTCGGACTCCCAGATGTCGTTACTAAAATCTTCGCTTGAGAAGCTCTCTCTCCTTAATGAGGAGAACAATGTAAAGCTGAGGCTCATTGAGCATGAACTCAAGAACCAGGAGCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017075