Os08g0119300

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0119300| Description = Protein of unknown function DUF1517 family protein| Version = NM_001067406.1 GI:115474548 GeneID:4344536| Length = 2...")
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Gene Name

Os08g0119300

Description

Protein of unknown function DUF1517 family protein

Version

NM_001067406.1 GI:115474548 GeneID:4344536

Length

2763 bp

Definition

Oryza sativa Japonica Group Os08g0119300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1067712..1070474

Sequence Coding Region

1067712..1068404,1068557..1068665,1069532..1069587,1069746..1069907,1070065..1070181
,1070376..1070474

Expression

GEO Profiles:Os08g0119300

Genome Context

<gbrowseImage1> name=NC_008401:1067712..1070474 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1067712..1070474 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatcgccgcgcgcctcctctccacagcgccatgccgctcgccctcgtcgtggccgctgccgccgtccaaaccctacctccgcttcccctccgcgccgctcctcctcctcctccggtcacccgccgccgcctcggtgatccatctgagtcctccgccggtaactcccctcgccgtcgcgtgtgatgatcggcacgcgctccccgactcggacgagccgcgcaaccggaacccacctgaccatcccgctccgctgctcgccgccgccgccgccgccgctgccgcggtggccagcccgcacgccgcgctcgccttgtccggtggatccatgggcgggtgctcggacacctcatcctcctattcctcctccttctcctcctcgtcgtcctccgattccttttcttcgtggtcctcgagcagcgactcatggaggtcatcgtcttcttcctcctcctctccgccgaagaagaagaaggtggtggtggtggagagcgcagatctggagactcacgaatcggtcggcacggcggcttctccgccgccgccgcctccggtggccctgaccccgtgggagaagttctggatcagcgtcgcggtggtgctcggcgtcggtgggctagtgttcggcctcatcttcctcatcaagagaagcatccccccgccgaggaccatcagtgtggtcaagcttcagattgcattgggtggtgtggctgcggcgaagtcgttccagaaggatctgaaccggattgctgagagggtgcaaggctctagccgacgttggtacaagttcatactgagcgataccatatcttcattgcaccgccacaaggattactgcatctctacaagcttatcagttgatataaaagacagcgactcttggaatggtcattttaagaaaatttcgttggaagaaaggggcaaatttgatgaagaaacgctttctaatttggaaggcgttaagagaaataaagaatactctacaaagatggatgggagcaaaaacgagtatatagtgttaaccattcttgttgctacggatggaacaatggatttccccaaattgatcacaaacgctgcagatctgaaagttgctttgacaaagctctactctacacccgaaacaggtcttgagggtattcacgttttatgggcacctcaagacaaggatgatattctttcgaaggagaggatgcaaaaggattatccatatctgaagcccttgagtgtctga</cdnaseq>

Protein Sequence

<aaseq>MAIAARLLSTAPCRSPSSWPLPPSKPYLRFPSAPLLLLLRSPAA ASVIHLSPPPVTPLAVACDDRHALPDSDEPRNRNPPDHPAPLLAAAAAAAAAVASPHA ALALSGGSMGGCSDTSSSYSSSFSSSSSSDSFSSWSSSSDSWRSSSSSSSSPPKKKKV VVVESADLETHESVGTAASPPPPPPVALTPWEKFWISVAVVLGVGGLVFGLIFLIKRS IPPPRTISVVKLQIALGGVAAAKSFQKDLNRIAERVQGSSRRWYKFILSDTISSLHRH KDYCISTSLSVDIKDSDSWNGHFKKISLEERGKFDEETLSNLEGVKRNKEYSTKMDGS KNEYIVLTILVATDGTMDFPKLITNAADLKVALTKLYSTPETGLEGIHVLWAPQDKDD ILSKERMQKDYPYLKPLSV</aaseq>

Gene Sequence

<dnaseqindica>1..693#846..954#1821..1876#2035..2196#2354..2470#2665..2763#atggcgatcgccgcgcgcctcctctccacagcgccatgccgctcgccctcgtcgtggccgctgccgccgtccaaaccctacctccgcttcccctccgcgccgctcctcctcctcctccggtcacccgccgccgcctcggtgatccatctgagtcctccgccggtaactcccctcgccgtcgcgtgtgatgatcggcacgcgctccccgactcggacgagccgcgcaaccggaacccacctgaccatcccgctccgctgctcgccgccgccgccgccgccgctgccgcggtggccagcccgcacgccgcgctcgccttgtccggtggatccatgggcgggtgctcggacacctcatcctcctattcctcctccttctcctcctcgtcgtcctccgattccttttcttcgtggtcctcgagcagcgactcatggaggtcatcgtcttcttcctcctcctctccgccgaagaagaagaaggtggtggtggtggagagcgcagatctggagactcacgaatcggtcggcacggcggcttctccgccgccgccgcctccggtggccctgaccccgtgggagaagttctggatcagcgtcgcggtggtgctcggcgtcggtgggctagtgttcggcctcatcttcctcatcaagagaagcatccccccgccgaggaccatcagtgtggtcaagcttcaggttaatttctctgaatctgatcttagagtgtccatgagcaattcagagtttcagactgggtttcttgatatgatcagtgatcgatcactgattcaaaattgtatatatactgattggatgatctatcttcgtctctgttactcgcaatttagattgcattgggtggtgtggctgcggcgaagtcgttccagaaggatctgaaccggattgctgagagggtgcaaggctctagccgacgttggtacaagttcatactgagcggtaatgcctattctgaatttcttgcacatcaaatctatttattctcctcgcaaaaaaaaaagaatctatttattctgaattcttgcacatcgaattctgctttggtggttccatgctaattacttaattgcagatggattatatttgacactagctagtagctttaaatataaatcgcacttaaaatgtctttaataataagacaagtagcaacaaaattaataatatttacataaatttattgaaccaagacaaatggtcaaactttgtagccaaagtcattcacgccaaatatttattatcggagggagtagtatgttagttttactgttttaaaccggaataatatcctggcttctgaatctgaagataaacaaagtcacaacgtcagtctcttatctaggttgccctctaatgagggtttcaagtgtgcaatcagctccacatataggattagttggcaacttttatggatcattaggagtaggaaggggaaatatatatttgtgcttaggccacacacggcacgcaccttgcagaaagttcagagatatatatattgagcatgtttttccatgtgtgcttatggatgtagatctgttcaagaagtactactatcaagtaatagcattttttgcagaaattaatctatttgtgcataggactcaatttagtattaaagtgatggtaaaatattcttttttgtcgggatgaccgaaggagatggtaaaatgtacctataataaggttataaaataatgttactgttaacacttcatataacttagatacttatgaccactatcaattgtccaatgtatcatggtagcttattttttatgttctggtgactcatcttatttcagataccatatcttcattgcaccgccacaaggattactgcatctctacaagcttatcagtaagaaataaaaacagttttaacattcttttggtagactgacagacatagtttgtgttcgcttctagtttctctccctcgatttgacagcctttgtatgttccgcccactgcaattacgtactgaatcgtataattttgctgaaccatttattttaggttgatataaaagacagcgactcttggaatggtcattttaagaaaatttcgttggaagaaaggggcaaatttgatgaagaaacgctttctaatttggaaggcgttaagagaaataaagaatactctacaaagatggatgggagcaaaaacgagtatatagtggtatgttagacttgttactttgtgaaatgcttcttgaaatatttgccatcgatctgctgattatgatgataaaaggacactttcttgacaaaaaaaatggcgttcttatttgtttgatgtctaatgactgatttgttctgatctccaaatcatccagttaaccattcttgttgctacggatggaacaatggatttccccaaattgatcacaaacgctgcagatctgaaagttgctttgacaaagctctactctacacccgaaacaggtcttgaggtatggggaatatttccatttgtatttcgtaaatcgtaagctagcacaactgcttcttggtatattattgaacaagctagggaaaacgcagcttgaatttactagttactcatatcacttttaccacttttctgataagtattattatctgtttgttgagtgcctaatgaattggacaaactaattttgttcagggtattcacgttttatgggcacctcaagacaaggatgatattctttcgaaggagaggatgcaaaaggattatccatatctgaagcccttgagtgtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0119300, RefSeq:Os08g0119300