Os09g0116100

From RiceWiki
Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0116100| Description = Protein of unknown function DUF597 family protein| Version = NM_001069122.2 GI:297609043 GeneID:4346413| Length = 40...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0116100

Description

Protein of unknown function DUF597 family protein

Version

NM_001069122.2 GI:297609043 GeneID:4346413

Length

4019 bp

Definition

Oryza sativa Japonica Group Os09g0116100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1225132..1229150

Sequence Coding Region

1225132..1225299,1225530..1225679,1227629..1228006,1229103..1229150

Expression

GEO Profiles:Os09g0116100

Genome Context

<gbrowseImage1> name=NC_008402:1225132..1229150 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:1225132..1229150 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacttcttttaaggtttatctaatctcaaaaatgacttcttttaagggggaggaaattacggtggtggaggaaccaatactgttcgacaacaatcaagaggaggacaacagttcaaacccactgaatctattggctgatacatcagagttgtttcggaacatggatgatgatgagtcacccctgtggctgaacgtactgctgagaaccatattctggaggaagtgtgacgtgcatgagcagcttgagaatgcacatagggctgaggaaagcatcttctgcatcaactgcctcaagacaatatgcccacactgcacacatgatgaaccgagccaccaactcctcaaggtccgccgctacatcttccgcagcgtcgtccgcgtcaaggacatgcagaattttgggattgacatgtcttacatacagacattcaaatgcaatgggcacaaggtagtgcacctaaggcccataaagaggtcagaacatcatagacctaaagctggaacacctcattgcacgagttgccactgctggctacacaatgcacccagccttacctgttcacttagctgcaagaaaaaggcaggcatatcctcagatgacttctcagggcctgaagcttcaactcgagtttctcgttcacgaaatcatgcatcaaatgtcaatcagaaacatccaaccaatacgaagctgcgtaaaaagcctcgcaagcaagcaaaccctgaaagggctccattcttctga</cdnaseq>

Protein Sequence

<aaseq>MTSFKVYLISKMTSFKGEEITVVEEPILFDNNQEEDNSSNPLNL LADTSELFRNMDDDESPLWLNVLLRTIFWRKCDVHEQLENAHRAEESIFCINCLKTIC PHCTHDEPSHQLLKVRRYIFRSVVRVKDMQNFGIDMSYIQTFKCNGHKVVHLRPIKRS EHHRPKAGTPHCTSCHCWLHNAPSLTCSLSCKKKAGISSDDFSGPEASTRVSRSRNHA SNVNQKHPTNTKLRKKPRKQANPERAPFF</aaseq>

Gene Sequence

<dnaseqindica>3852..4019#3472..3621#1145..1522#1..48#atgacttcttttaaggtttatctaatctcaaaaatgacttcttttaaggtttgtctaggtgcatagtcagaaataaagttccattttaagcagctgtttattatctatgtattatcatgctcaaataactaacaattttagtctgttcacaccagatctaactttgattcctagtgagtgaaaggtatgtttggcacggctctagctccagctccacctctcttggagctggattccaggcacacagtttcagttctatctaaaatgggagtagaggctagagcgttctcacaaaatgaactagagatgtagagctgggtttagcctactccacaattccactctagacccaactcctgaagttaaatttaagagttggagctctaacaaacatgccctcggtccctagctgaattcttatagattttcagtcggcacttttccttaaacttttgggtggaaaccaacttagccccattctaaatctacttaattactaccttctatatttcaactattggatacttttttcacaagacttaattaatccatgaactccaaaaggtttttacactctctaatccaagtgtcacaatactttgattatgaagtagtatcatagttaattttaaattttgtgaaaaaaatgcataagctttccaaattaatgtgtgaacggaccaatgcaatctttatacaagatttgatattcaatccgagcaaaacctcaaattaaataatagaaagcaagcaactcctcgaggaatatataagagatgagaccttggagttcaagaagttgtccaaactagataaaatgccccaaagaataatactataccacctataggacagcaatactgaacatctgttcaaaagtcaaaacaattccaataatttccaccgaattttctgtttattttttaatttaacttctggctgattaattcatgatactttgcatatgtttcaaaatttctttagtagttgaagattgataattgtatgtcctgtcaattcaataactaaacaaataactgtcgaattttttttgttttgtattatgtcttttcacatatatatattataaactgttcaagatgtccacagaagattgataactctatatcatgatgaattccagggggaggaaattacggtggtggaggaaccaatactgttcgacaacaatcaagaggaggacaacagttcaaacccactgaatctattggctgatacatcagagttgtttcggaacatggatgatgatgagtcacccctgtggctgaacgtactgctgagaaccatattctggaggaagtgtgacgtgcatgagcagcttgagaatgcacatagggctgaggaaagcatcttctgcatcaactgcctcaagacaatatgcccacactgcacacatgatgaaccgagccaccaactcctcaaggtccgccgctacatcttccgcagcgtcgtccgcgtcaaggacatgcagaattttgggattgacatgtcttacatacaggtactacttagatatagtttgcactgtggttaatcaacttggaaaattttagttaatttagtttccctaggtccaactaatttaattaacttctttcgatttaattaatcatgctaggtcagtttgtgtgcaataaacactttgttgaatctttgaaactcctatatatcatgttattttttatgtaggcaacaactaagtatatatttgatacttttatatgcttatcaatgatctgatcattatttgcttcattttcatattaagtcttagcattaggaatgataatttattcgtgccaatatgtgtttgaagacaaattgtctggtcctcttagaaccctgcaaaaccatactaagcgcatcatgtatactgctcatccactgatcagatagctagcaccccacagctcaaactcaatttgacacaattagagtcaaatcacttaatttctaatgaaatgagaacaaataatttttaagatcaagtgattgtgcagtaacttagtaaaggatatgtgtctagcagcctaacactactaggataaatggatataatgatccggaggtgaatgccctgatcattagaactcaattttaagctcgaagtaaaagattttattcttttccaacacatatggagttgttataaaactgttttattagctcatctgcaatgcataatttggtgcatacatatatttattcaaaatatgtatctaaatatcattgtagttatgctagcacatgcaaagatatttatactgatgcatccatcccatgaaattaaattcggtgttttaagatgacaacaacaagcacttaagcttgttgagattttattcagatcatagtaatttgtataattcagtaacaactgagtgataacaccttgaacataaacaagagtgtccacaaacacgaaaccacacatgttctagcgttaagttctggacataagcgccactaataaactgtgcgacagatgcacacaaaaatagttacaaattaattaataacataaacatttcccatggaaacctaataagcgttactgaagacaatcagtaattactatccattccctcacatatgatagttagtggtaattcatcttttgtagtaccacaataacaaatttgatcagtaacttactttcccatatatgttatcccgcaatagtagatgcaatagtagatggagccattaattagatcgacccagaacctctaactaagtcaattcttcataaaccctttttgcctgatcaagagactacacgtcatttcacaaccatgcatacatttgatttgtacccaaaatttccaaaactgactacatcttaataattgtgctcatacagaaacgcatctatgtacaagcctgggaaatcatgcttggtttccatatagtttataattggtattcatctaggctgacacctgatagatgtgatggaatttatgttcatatgctactttccagtcatgtccttttgacattatacatatttgatatcctttcaactatatgatgcatattttgtaattatcctctgatacattgtatgcattggttttcaacattttatatatttgtttttcttttgcctacagtactctttcatgcgcgcattttcttgacacactaacggattcaaataatatcgctctagtgcagagattatatatgtctagtgaaatgttatctaaaaattaaaactatgatccgtattgtcattccgataagtgacagtaagattccctataattttattgagcttgcactgtatgcattggttttcaacattttatatttgattaagaattcaacatttcttcctttgtatgggcttcagatgatttctaaagcactatttaggctaccaccttttgagccattaaatttcattcatcacttgtattaacatatttatctttctatttgcagacattcaaatgcaatgggcacaaggtagtgcacctaaggcccataaagaggtcagaacatcatagacctaaagctggaacacctcattgcacgagttgccactgctggctacacaatgcacccagccttacctgttcacttagctgcaaggttatttttatcacacattaactactacttatatatttatatatatcttgttatcatcatctcgactcaattgtttttcattaatggacaagcttatgctatggataatgtttttgattctgctttactagatttcatgttaattactcacactgttgttaaattgtaatcatggtaagtagagtattggctattgttaattttgtttagattttctcttcttctgacagaaaaaggcaggcatatcctcagatgacttctcagggcctgaagcttcaactcgagtttctcgttcacgaaatcatgcatcaaatgtcaatcagaaacatccaaccaatacgaagctgcgtaaaaagcctcgcaagcaagcaaaccctgaaagggctccattcttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0116100, RefSeq:Os09g0116100