BGIOSGA017109

From RiceWiki
Revision as of 04:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017109| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017109, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017109

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017109, complete gene.

LocusTag

OSJNBA0070C17.24

Ensembl Transcript ID

BGIOSGA017109-TA

Ensembl Protein ID

BGIOSGA017109-PA

Length

1938

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30058360..30060297

Sequence Coding Region

30058360..30058551,30059018..30059177,30059408..30059577,30059656..30059878,30060143..30060297

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30058360..30060297 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30058360..30060297 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTGGAGTCGCCGTTCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCGTCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGCAGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCCGGAGGATTTGACGCCCAAAGGGTTCAGGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAATGGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAVESPFRADVLRGKAALVTGGGSGIGFEIAAQLARHGAHVAIMGRRREVLDKAVAALRSHGLRAVGFEGDVRKQEDAARVVAATVQHFGKLDILVNGAAGNFLASPEDLTPKGFRTVVDIDTVGTYTMCYEALKYLKKGGPGKGPSTGGVIINISATLHYTAAWYQIHVSAAKAGVDSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMRKLAPEEMAKGSREIMPLFKLGEKWDIAMAALYLASDAGKYVNGTTVVVDGGLWLSRPRHIPKEEVKELSKVVEKKVRASGVGVPSSKL</aaseq>

Gene Sequence

<dnaseqindica>1..192#659..818#1049..1218#1297..1519#1784..1938#ATGGCCGTGGAGTCGCCGTTCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCGTCGCCGCCCTCCGCTCCCACGGCCTCCGGGTGAGCCCTAATCCCCTCTCCCTTCCCGCCTACCCTACCTACCACTTCTTCTCTATTTAGGATTAAAAATTGTTTGTTTTTTTTTTCATCTCCCAGTCAGTCTCGTGGTGCTGCTGGTGAGTCAAAATCTCGATAGAGAGATTGATGTTTTCTTGTCTGAGTCCATCAATAGATCCGAGTATTCGTGGGGGAAGGCTAAAACCTTGTGAGAGTTGCTAGCGTTAACGCGTCTATATACGAGGAGCATACTGAAAATTTTTCTGAAGCGTGCTCGCGCTGCATATAAGGATTCCTCATGACTCATGCAGATGTGATTTATGCTTCATGTTCATGTGCCTGACTAGTGAAATAAATATAGAGTTCATCATGCTTCCCTCTGATTTCAGTGCTGATCTTTGGGGGTAAATCTAGTCCTAATCTGTAAGTGTAACCCTGTAGTAATTCTGGCTTGCTGTCACGTTCACAGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGCAGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCCGGAGGATTTGACGCCCAAAGGGTTCAGGACAGGTACTTCGATTGAATCAATCCTCGCACATTAGCAGCATTACTTATGATTTTCTTTTGTTCCATTTAGATGTTATGTGATTTTTCTAGTTTGTGCAGTTCTGCTAGTCTGGTATCTTTCAACAACACTCGTGCTATTAACTTGTCTAAGTATCTAACAGCAGTCTACTTGAGTTCTTGATGTTTTTCTCTTTTACAGAGAAGTTAGTATTGACTGGGTTTTCTCTCTGCAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGTACTTGGATCTTCTATTATCTGTGACGAGAAAAGGATTGAAATAAGTAGACTTGTCCTGATGGATTGGCTTCTGTAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAATGGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGTTAGTTATGTTCTTGCATGTTTTCTATCCAAATAATCAGAAGTTCCATTTGCTAACTGAAGTTCAGTAAGTTCTGAGCAGCTGCTTACCTGAAAGTTATCTTGAAGCAATTGCTTGCTTGATAGTTATAAATCTAAAATTATCTGCTATTATAGTGTTTGCCAGCTTTGGTCAAATAATGTTCAACAATAAATCAGTGAAGTGATGCCTTATTTTCCAAATGAAAATTTGGCCATTTCATGTTCTCTACAATTCAATTTGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017109