BGIOSGA017112

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Revision as of 04:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017112| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017112, complete gene.| tag = OJ1657_...")
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Gene Name

BGIOSGA017112

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017112, complete gene.

LocusTag

OJ1657_H11.7

Ensembl Transcript ID

BGIOSGA017112-TA

Ensembl Protein ID

BGIOSGA017112-PA

Length

6605

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30077551..30084155

Sequence Coding Region

30077551..30077931,30078042..30078161,30079733..30079810,30080159..30080335,30080458..30080535
,30081822..30081994,30082080..30082235,30082348..30082408,30083988..30084155

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30077551..30084155 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30077551..30084155 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTATGGCATGAGTAGGATGGAGGAGGAATACAGCGAGCATGAAGATCAGAATAATGGTGGATCTAATTCACAAGTGAATAATGAGTTCTTAAACACACATAATGATATTTTCCATATGACTCAAATAAGATCAGGACCTAGTGAAAGTCTTCGCAAGTCTATTGGTACAAGCAAAGATGTGATATCGACAACCAGGTTATTGTCTGGAAGGGAAATTAATTCTTCAGGAAATGGGAAGTTCTCTTCAGTTGATCGTGCGTTTCTTCTTGGTCGTTATCTTCCAGTTGATGGCCCTGAAATATTGGACAGGATGGATTCCCGAGCTTATGTTTCACAGTTTTCTGCTGATGGATCTCTTTTTGTTGCTGGTTTTCAGGGAAGCCACATAAGAATATATGATGTTGATAAAGGTTGGAAAGTACATAGGGACATTCATGCTAGAAGTTTGAGATGGACCATTAGTGACGCATCACTTTCCCCTGATCAACAGTTTCTTGTCTACTCCAGTCTAGCACCGATTATCCATATCGTCAATGTTGGGACTGCTGCAAAACAATCATATGCTAATATCACTGACATCCACGATGGACTAGATTTTTCACAGCATGAAGATGTTCGATATACATTTGGAATATTTTCTGTTAAATTCTCTTCTGATGGCCGAGAGCTTGTTGCTGGCAGTAACGATGATTCAATATATGTTTATGACCTTGTGGCAAACAAACTAACGTTGCGTTTGCCTGCTCATCATTCTGATGTCAACACAGTAGCATTTGCTGACGAAACTGGCCATCTCATATATTCTGGAAGTGATGATAATTTATGCAAGGTCTGGGATAGGCGATGTTTATCCACAGAAGAACCTGCTGGAGTTTTGACTGGGCATTTGCATGGCATTACTCATATTGATAGCCGTGGAGATGGTCGGTGTTTCATATCAAATGGAAAAGACCAAGCTATCAAAATGTGGGACATCAGGAAAATGACATCCAATGCTGATAGTTATGAAGACAGAACCTCAAATTGGGACTATAGATATTCAAGATATCCACAACAGTATAAGCAACTAAAGCATCCCCATGATCAGTCAATAGCTACATACCGGGGCCATTCAGTTCTTCGTACATTGATCCGTTGCTATTTTTCTCCTGCATATAGCACAGGACAGAAGTACATATATACAGGATCCTATGATTCTAGTGTTTGTATCTACGATGTGGTGAGCGGATCACAAGTTGCAAAACTCAAAGGATATCATCAGCTGGCAATTCGAGACTGCAGTTGGCATCCCTTCGACCCTATGCTTGTCAGCTCATCCTGGGACGGCCGGGTTGCCAAGTGGTCCAGGTCTTCCTGTCAGCAAGAAGAGACTACTGATCTCGATTGA</cdnaseq>

Protein Sequence

<aaseq>MGYGMSRMEEEYSEHEDQNNGGSNSQVNNEFLNTHNDIFHMTQIRSGPSESLRKSIGTSKDVISTTRLLSGREINSSGNGKFSSVDRAFLLGRYLPVDGPEILDRMDSRAYVSQFSADGSLFVAGFQGSHIRIYDVDKGWKVHRDIHARSLRWTISDASLSPDQQFLVYSSLAPIIHIVNVGTAAKQSYANITDIHDGLDFSQHEDVRYTFGIFSVKFSSDGRELVAGSNDDSIYVYDLVANKLTLRLPAHHSDVNTVAFADETGHLIYSGSDDNLCKVWDRRCLSTEEPAGVLTGHLHGITHIDSRGDGRCFISNGKDQAIKMWDIRKMTSNADSYEDRTSNWDYRYSRYPQQYKQLKHPHDQSIATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSYDSSVCIYDVVSGSQVAKLKGYHQLAIRDCSWHPFDPMLVSSSWDGRVAKWSRSSCQQEETTDLD</aaseq>

Gene Sequence

<dnaseqindica>1..381#492..611#2183..2260#2609..2785#2908..2985#4272..4444#4530..4685#4798..4858#6438..6605#ATGGGTTATGGCATGAGTAGGATGGAGGAGGAATACAGCGAGCATGAAGATCAGAATAATGGTGGATCTAATTCACAAGTGAATAATGAGTTCTTAAACACACATAATGATATTTTCCATATGACTCAAATAAGATCAGGACCTAGTGAAAGTCTTCGCAAGTCTATTGGTACAAGCAAAGATGTGATATCGACAACCAGGTTATTGTCTGGAAGGGAAATTAATTCTTCAGGAAATGGGAAGTTCTCTTCAGTTGATCGTGCGTTTCTTCTTGGTCGTTATCTTCCAGTTGATGGCCCTGAAATATTGGACAGGATGGATTCCCGAGCTTATGTTTCACAGTTTTCTGCTGATGGATCTCTTTTTGTTGCTGGTTTTCAGGTATGCTGTCCTTCAACCAACAAAAGTGAAGGCTTTATTAGGCTCAAGTAAGTAGAGTGTTAATTAGTTTTACTTGCTTCTAATATTTTTTCTTTTATTTCCATTATCAGGGAAGCCACATAAGAATATATGATGTTGATAAAGGTTGGAAAGTACATAGGGACATTCATGCTAGAAGTTTGAGATGGACCATTAGTGACGCATCACTTTCCCCTGATCAACAGTTTCTTGTAAGTTTCTGGCACTTAAACAATGAGCTCTTCATTTCTCTTTAGTCTCTCTATAGATTGTCCTAACTTAGTTCAGTCTTCAAACATGTGTTACACTGTAATGCAGTTCTTTTTCAGCTGATGTCAATCTCTTCCACTGTTTTTCCTGATTGATATATGGATTTAGATGTGTTTACCCATTTACAACAGCACTAGTGGGGTTGATCATTAACTTCTGGGTATTGGGAATGGAAACATGATGCTACTGGGAGATGATGTAAAGGAAAATTTGACATTTCCGTGCGGTATTCCAAAGTTGTGGTTGGTCTGGAAGGCATTATAAAACTGTAGCTATCTGCCAGAGCTCGTTCTGACATAAACAGTATAATCATAGCAAGTACTGCGTCAGTCCCAAAATATAGCAAGTGTGTCCAGATGCATAGCTAAAACTTGCTATATTTTGGGACGGAGGGAGTAGCAAAGGAGTGCACCGTGTTTATTTTCTCTTGGTACAATATTGTTGAGAGGAAAATTCCATATGCCTCCTCTGTCCTTCCCCTTGTAGCATGCCCAAAAGTTCCCGTTTTCTGGGTATAATATGTTCAAAATTCCATTTCTGACGTTTTGAGAATATTCTATATTTTTTCAGATTTTAAAAACGTTTTTCAATTTCCTTAACGTTAGAAGTAGTGACCAATAATATTTAATCAACACTCTAAAATATTCTGTTTAAATTCAAGGTATTGTTTGGAAAATTTATTTTTCTCCATTTTTTTAGTTAAATTCGTATCTTTAACTATTAAAAACAGATGGGATTTTTTGGATTTTTGGGCATACGTGGGATCTGAGATATTCTCTGTGAAACATAAGATAGTGTTCTTTTGATGGGTCGGGTGTGTTGTGACAACTGGCCACCCTTTTGGTGTGTATCCAAACAAATGGTCAATAGCAACACTGTCTTGTAGCCAATTTTGACATCAAATGATTAGTAAAATCCATTTGATAAGGAAAAATTGGGTACATGTTAAAATATTTTTTGTGGCATTTGGTATGACTATAACTCTGTAAGGCGCTGCAAAGAAGTGCTGGTGTTTGTGGTATTTGCAGCTACTTGCTGTATCCTCACACCCATTAGAAGAACCCTTTTTACAGAGATAGAGAAGACATTTTTAGCTTTTAGAGTCTCGAGCAATGCCCTGTCGCAATATTTTCCTCATATGAATGTGCACTTTATATGAAGTTCAGTTTAGTTTACTGGGTAGCTGAGCTGCTGCCTCAAATGTTGTTATTACGGTATTTCTTTATGTCTTTGCTTGCTACACCTTGTCTTTTCCTCGATTATAATCCAGTGGGGACTGTGAACAACTAACCAGCGAGATATGTTATAGTTTTCATTCAATCCTTGGTCCTTTCAGGACATTAGATCACATAATTCTGTATGATGGTTTCTGCATCTCTTACAGATCTATAGAAAATACATGCTAGTCAATTCTTTCTGCTGTATTTATTTATCTAGCCTTCCGCTTATCATTCTCTGTTTACATAGATGTGTAAGGTTGTTATTTTTGACCTATCATTCTTTTGAACTGCAGGTCTACTCCAGTCTAGCACCGATTATCCATATCGTCAATGTTGGGACTGCTGCAAAACAATCATATGCTAATATCACTGTGAGTGATCATCAGGATTTGCACTTCATTACCAGCAGATGCATTCATTCGAACATGCATAGATGCATAGTGGCCTTCAAAAGAAAAAAAGGAGATGCAGAGCTGTCTGTTTTGTACTTTCCTTTGCCTAATTTTATGACATATGACCATCCTGTGTAATGAGCAATCACTAATACCACTAAGGCCATCTTATACTCACACTCCAATTTAAAGATCCACAGTTGATTTATACTTCATACATCTTCCTTTGGGACATTCTTGATCGATTAGATTTGTTGCAGTATAAACATGTCCACTATACATTTGTATTATTTTCTTATAAATTCTTTGTTCTTTCATTTTCTGCAGGACATCCACGATGGACTAGATTTTTCACAGCATGAAGATGTTCGATATACATTTGGAATATTTTCTGTTAAATTCTCTTCTGATGGCCGAGAGCTTGTTGCTGGCAGTAACGATGATTCAATATATGTTTATGACCTTGTGGCAAACAAACTAACGTTGCGTTTGCCTGCTCATCATGTATGATAATTTGGTTGTTTTCATGGCTTGTATCTTTATTTAATCTTCTTAATCTATTTCTTAAGTTGGTTATGGGCTCTTTCCATATTTGATCTCTAATGTGTTCCCCCCTACTTTTCCAGTCTGATGTCAACACAGTAGCATTTGCTGACGAAACTGGCCATCTCATATATTCTGGAAGTGATGATAATTTATGCAAGGTATCTTGATGTTGTAAATTATTTATTCTTTCTACAATAACATATTCATTGAACTGTTCTCATATTTTCACAGCAAATCTGAGCATGTGCCTTTTTTATGTTATCTTTAGCTGCAACTTGCAACCTCCATATATCTGAAAGACTGAAATTTCTGGTTCTAGATGATTTTTGTTTCATCCAGAGTAGCAAAGTATATGCCATAGTGCTGGTTGGTTTCAGTATCTGTACTACTTACTTTCATTGTTGCTCTCAAAAAATATACCTAAATAAAATGAGTTTAGGTTGGGTTAGATGTCAAAAAGACAAAGGAAAAAGTTGCTAATAAAAACCATTTTTTCATATTGCTGCTGTTCTAACTTTTGACCAAATCCCAGAGTGTTCCCAGATTGCAAGGTGCAATAATAGGATTAAGTTGAATCCTTGATATCTCTTCTTTTTGCTGGTAATCCTCCTGTGCACTGATACAAATGCATATCATTCTCCTGTTGTTAGTTACCAAAATTTCACCTGCAAAAGAGGTTTTACCACCCGACACAAGATGTTGCTAATATTGGCATACGACAATCACATAATATGTTTACTGTCTAGGTTGTATGACAAGGACCAGGAAAACAGGAATATATGTAGAGGAATTTCCAAATTTGAAACTTTGGACACAACAAAAAAAGAGAGCCTGGAACAATGCACACAAGTTTCAGATGGAGTCTCTTTAAGTATTACCCTGTCTTCTCTCTTCTTTCATTGGGTAAACTTATAGGGCCTGTTTAGCACATGGGTTATGAGAGGCAGGATTGGAATAGTGAAATGGGTGAAAGGGCATTAGGCAAACACCATTGTCTGAAATGAGGTGGAGAGAATGGATGGCTAGGATGCAATTTTACATTTTGATGGGTGGGATATCATTTCCCTATCATTGTTTGCAAAACGAGCCTATATAGTCAGCCATAAAACCATAATAGTTCTACATCCTCATTACTGTGAGAAATGGACTATTCCTGTAAGTTAATCAACTGTATTTATATACACGCCTTCTATCCTTCTTTGTATTGTCTCGAATAGTAGACAGGCTGTTACAAAATGTTTCTCAGGGACAAAAGTAAAAGGTATCCAACATTCACAAACGCCGTGAGGATGGCTGAATAATTAATGCATGGTTTGGATTACTCTGCCTGTTCATGTAGCTTGATAGTTTTGAGAAAGTACTTTTAAAAAAAATCATTTAGAGGTATTGTGTTAATTATCTTTTTTTAATCTGGTACTGTGTTAATGATCTTGGTTTTCTGCAGGTCTGGGATAGGCGATGTTTATCCACAGAAGAACCTGCTGGAGTTTTGACTGGGCATTTGCATGGCATTACTCATATTGATAGCCGTGGAGATGGTCGGTGTTTCATATCAAATGGAAAAGACCAAGCTATCAAAATGTGGGACATCAGGAAAATGACATCCAATGCTGATAGGTAGGTGTTGAGCTATCAACATAAAACGTAAATAAAATTTTAGTTATGAAGACAGGAATTTTACCAATCTTATTGTTTCATGCAGTTATGAAGACAGAACCTCAAATTGGGACTATAGATATTCAAGATATCCACAACAGTATAAGCAACTAAAGCATCCCCATGATCAGTCAATAGCTACATACCGGGGCCATTCAGTTCTTCGTACATTGATCCGTTGCTATTTTTCTCCTGCATATAGGTAACTTCATGATTCTCGGTTCTGATATGTCATATGAAGGATTTTGTATTAGTCAAACTATGTAAAGTAGTAAGTGCTAATGTCCCTTTATGCTTTTTTTTTGTTTCTACAGCACAGGACAGAAGTACATATATACAGGATCCTATGATTCTAGTGTTTGTATCTACGATGTGGTATGTCTCTTTTCAACTTTCATGACAGCAATCTACAGATTGCACTGCGCTTGCTATACTCAAGCACCTTTCTTGGATGAATTTTCCTGTTGATTTTTTTTTCGATCTTCTTCAAGGAAGTCTGATTCTATTTTTTTAATGCTTGTGTAGTTGCGTACTTGTATATGTGTGTGATTTTTTCTACATGCAAATTGGGGAAATCTGAAATGGCAATAGGCAAACACCATTGTCTGAATATGTAAATAAAACTATCAACCAGATTCTGCATTGTGCATTTGTGCCACATATATTTCTCCCCCTAAAAACATCACTCCAACAAGGTGTTTTTTTTTTCGCCAAAGCCAAAATGACTCTTGCCTTTCCCAGAACCTGAAGACTGCATCCAAATATGTAAGATCTCAGCCAGTTTGGCCAATTCCAGGCTTGTAATAGTTCACATGGTGGTACTGGTATCCTTGACTTGCATATCTCACTGCATGATATCTGTTCTGGCTAGTGCCTTCAATCAAAGCGAAAAATAATATAACTATTTTGGGTGTTCGGGCTATAGGAAACAAACCTTGTATTTATGTCATAGATTGTATACAGCATCGGTTCATATGACTGACCACCTATACGCTGACTCGTTCCTCTAGTGGACAAATGTAATACCATGACCAATTGGCCTATTCGTTCTTTTAGCAATGTAATTAGTCTAGTACCAGCAGGCAGTTGTTGTGCACTTATGCTAGCTTGAGAGTTGTATATGATCTTTGGATAACCTCCAATACCGAATTAGATTATTCCTTTTTTTCTTGAACACGCAAGAGAATTGCATGTAATTAGATTAATCATGTTATGTAAAAAGGAAATGGTATGGGTTACAAATCCATGATGTTACAAAATGCCAGCCCAATTGTTTTGCTTTGCAATGCGTTTTGCTCAAACAGCCTAGGTTTTTTCGCCAGGCCGGTGGAAACCGGCCGAAGTTTATTAAGGGAAAAGAAGGGTTTTTAAACAGCTGTTACAACAGCCTTTGGTAGGCAAAGTCCCTGATGGCTGGCATGCAGCAGCGTTAGAGTAGGGGAAGATGGGAAAGATATTGGGAGCCTCATTGGTTGGCCTCATAAGTCAAAACAAAAGCCAAAATTTAAATTTTCTAACTTGAATTTGAAATTGATTTTAAGATATTTTCAACGTAATTTTTTACACTAACTTTTAAGTCGCTACGAACAAATATATAAAAGTTTTATCGATAAATTAATATTTATTCGCAAATAAACTGTTTTGATTTATTAGAGAATATGGACAACTGATCTGATGATGCTCCAAATTACATGCCATCTTTTTAAGAGTAGTTGGATCTGTGACAGTGCAAAAAAATTAAATTCATTCCGTACACTGAAAACCTATTCTACCACAGAATAGGCGACAAAAAGTGTACCGTTGTCCTCCCTTCACCATAAGTATTCTTTTGACAATTTCTTTGTCCATATTGTTACTTCAGTAACATAAGGATTCTTCAGACAATTTCTTTCATCTTGTTACTTCAATTAGTATTTCGAAAGGCTCATATTGCACTATCTTGTTCCATGTTCAGGTGAGCGGATCACAAGTTGCAAAACTCAAAGGATATCATCAGCTGGCAATTCGAGACTGCAGTTGGCATCCCTTCGACCCTATGCTTGTCAGCTCATCCTGGGACGGCCGGGTTGCCAAGTGGTCCAGGTCTTCCTGTCAGCAAGAAGAGACTACTGATCTCGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017112