BGIOSGA017122

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Revision as of 04:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017122| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017122, complete gene.| tag = H0525G0...")
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Gene Name

BGIOSGA017122

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017122, complete gene.

LocusTag

H0525G02.2

Ensembl Transcript ID

BGIOSGA017122-TA

Ensembl Protein ID

BGIOSGA017122-PA

Length

3251

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30170320..30173570

Sequence Coding Region

30170320..30170383,30171437..30171492,30172223..30172584,30172736..30173570

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30170320..30173570 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30170320..30173570 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGATAGAGCTCCTGGAGGCGGCAGGAGAGACGGACCTTGAGCTCAGGCTCGCCAGCGGTTTTTGCGTTAGCTTGATAGACATCAACAGAACCAGAATGAACAAGTTAGTGAAGGTAGGATCCCGTCCTCGTCAAATTGCTTGGGGAATGTCAAGAATATGCTGTGAGCAGTCTCCTGGTACTTCCAGCAAGAGATATGAGAGGTATCAAAGACAACCACAGAATGTTGATCTCCCAGAATTGCTCCCAAAGAAGAAAAAGAAGCCATTTCCTGTTCCAATTAAGAAGATGTTGCAAGCTTCTCGACAAGATAAAAGGCTTGCACGAATGCGAATAGAGAAGCCTCTTGAGCCCCCAAAGAATGGTTTGCTTGTTCCAGAGCTTATTCCTGTAGCTTATGAGGTCCTTGATAACTGGAAGGTGCTCATCAGAGGTCTCTCTCAACTGTTGAATGTTGGTACAGTTTATGGTTGCAGAAAATGCCCCCAAGTCCATGTTGGTCCAGTTGGCCACCAGATCCAAGATTGCTATGGAACAGGAAGCCAACGTCGGAATAGCCATCACTCTTGGGTCAGAGGATCCGTCAACGATGTTCTCATCCCGATTGAATCTTATCATCAATTTGACCCATTTGGGTGGAGAGTCAAGCATGAAACCAGGTTTGACTATGACAGGATTCCAGCCATCGTTGAGCTATGCATTCAAGCTGGTGTTGAGTTGCCACAATACCCCTCAAGGCGACGAACTGCTCCTGTCCGGATGATAGGCAAGAAAGTGATCGACCGTGGTGGGTTTGTTGACGGGCCTAAGCCACACCGTTCAGAAGACTGCATATCTCTGCTTGCTGAACTTGACACATTCAGCAACCAGCAAGGCCAGTCATCGATGCCATCAAATGTGGAAGAGCTCGCGGAGAAAACACTGAAAGCATACTTAAATGTCCAGCGAGGTGTTGCACGGTTGATGAGGAAATACACAGTAAAAACATGCGGGTATTGCTCTGAGGTTCACGTTGGTCCATGGGGCCACAATGTGAAGCTCTGTGGGGCTTTCAAGCACCAGTGGAGGGACGGCAAGCATGGATGGCAGGATGCAGTGGTGGATGATGTCATCCCGCCAAATTATGTGTGGCATGTCCGTGACCCCACTGGCCCTCCTCTCAGATCCTCTCTAAGGAGTTTCTACGGCAAAGCTCCAGCCGTGGTTGAGTTGTGCGTGCAGGCAGGAGCTGAAATACCTGAAGAGTACCGGCCGATGATGAGAGCTGATGTCGTCATCCCAGACTCAGAAGAAGCTAGGTTGGCTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MEKIELLEAAGETDLELRLASGFCVSLIDINRTRMNKLVKVGSRPRQIAWGMSRICCEQSPGTSSKRYERYQRQPQNVDLPELLPKKKKKPFPVPIKKMLQASRQDKRLARMRIEKPLEPPKNGLLVPELIPVAYEVLDNWKVLIRGLSQLLNVGTVYGCRKCPQVHVGPVGHQIQDCYGTGSQRRNSHHSWVRGSVNDVLIPIESYHQFDPFGWRVKHETRFDYDRIPAIVELCIQAGVELPQYPSRRRTAPVRMIGKKVIDRGGFVDGPKPHRSEDCISLLAELDTFSNQQGQSSMPSNVEELAEKTLKAYLNVQRGVARLMRKYTVKTCGYCSEVHVGPWGHNVKLCGAFKHQWRDGKHGWQDAVVDDVIPPNYVWHVRDPTGPPLRSSLRSFYGKAPAVVELCVQAGAEIPEEYRPMMRADVVIPDSEEARLAA</aaseq>

Gene Sequence

<dnaseqindica>1..64#1118..1173#1904..2265#2417..3251#ATGGAGAAGATAGAGCTCCTGGAGGCGGCAGGAGAGACGGACCTTGAGCTCAGGCTCGCCAGCGGTCCGCGCGGAAGGGAAGACTAGAGATGTGCTTGAGCTTCGTCACCGCAATGAGTCCCCTGCTCCACGAGCTCAAGAATGCCATTGCTGCTTCTCTACTGCTCGGGGAGGAAGAAGGATAGAGAGAGAAAGTGAAGAGGAGATGAGGGAAGAAGAAGAGGTGGTCTTCATTTTTATTTTTATTTGCTGACTAGGCTTCCACATCAATGCCACGTAGGCGAAAAACCAGTTGAAAAACCATTCGAGGGTGTAAAGTGAATGGTATTGAAAGTTTGAGGGTGTATTATACTCGGTTTTGTAGTTTAGGGGTGTATTTTGGACAAGCATAAGAGTTCGAGGGTGTAAAATGGACTTATCCCAAAAAAAAAAAAAAATCTCTTCTCGTCGTCCTCTTCTCCAACCACGCGCTCACGCCGCCAGCCGGCCACCGCTTATCCCCTTCTCCAGCCGAGCGCGCCGTCTCTCTCCTCGCCGCGCCGCCGCGCTCTCGTCGTCGCCGCCGGTGGCTTCCGGACCTTCCTGGGTGGGTGAGGAGATCCCCCACCTCCTCCGCCGCCGCTCATCCTGCTGCTTCCGCCGCATCCGTTACGCACATCCTCTTTCCTATCTCTCTCTCTCTCTCTCTCTTTACCCACGCATTTTTCTTCTCGAATTTGCGTTAACCCTAGCTTCTGTTCTAGAAATTTGCCTTAACCTTAATACTAATAACAGTTTGATGGCTCCCAAAAAGGTTTGGGGGTTCAACTGAGCAGATTTTGTTCTTGTTTTGGCGTGTATGCATGCATGTGCGGCGTTTTTACCAGTTTTCAATCTCTGAAATGGATATGTGACCTTTATTTCTTCTGAAAACAGATAGCTAAAACTGTCCGTACGCATTGTCCGTGAGGGTAATAGATGATTTGCTAGTTTGGTGAACAGGAATTTGCAGTGATTTTTTTCATGGAGATACTTCACAATAACGGTATGTTCATTATTGTTTCAAATAGCCTTGCTTTCTTTGTAGTTTCATTTGTATAGCTGGTTTCTTATATTCAACTTTGGATCCTTAATTCAGGTTTTTGCGTTAGCTTGATAGACATCAACAGAACCAGAATGAACAAGTTAGTGAAGGTACTGATTCTATTCTATATTTAAAGTTAATTTTCTTTCAGTTACAACAGGGTGGTACTTTGGCTTGAAAACAATTATGAAATCATGTGTAGGTTAGCCATATTAAGTTCTTGAGTATCCTCCACTTTGTAAAGGAAGTTACTGATCCTACTAATTGGTAACCATCAGAAGTGCAGTTACAACCTGTAGCATAACATGTAGGATTGTGTAATTTCCAAAAAATGGCATATTCTTAAAAATCATAAAAATGTTAGATATCTCATTATTGATATGTCTGCTGAAGAATCAAGGATCTTGATTGACCTAATGAAATGGTAGCATCAGTTAACACATGCTTTATTTTAACTTGAAAGCTCTTTGTCCTGCATCCACCCAAATATGAAGATAAATGATGCATCCTTGTCATTTTCCATTGCTGATGTCTCAGGCAGTTGGGCCTGTTATTATTGTTCCCCTTCAGCCTGCACATTATTGTTAACTGTTTTATTAGCAGATAATCTCACAGAACTAATTGAAACTATGTTCAAGAAGCTAGTATTCTCATAAACAATCCTATTACTATGGTGGCACTCAATACTGAATATCACATAATGGAGAAATTCCTAGCAGTTGTTCATTATTCTTTCTTGTTTGCAGTAAATCACTGTTGCAATGGAAAATGTTTAAGCGTATTCTCTTTGTTCAAATGCTGTGATCAGTTATAAATTCATCCTTTATTTTCTTGTCTCAGGTAGGATCCCGTCCTCGTCAAATTGCTTGGGGAATGTCAAGAATATGCTGTGAGCAGTCTCCTGGTACTTCCAGCAAGAGATATGAGAGGTATCAAAGACAACCACAGAATGTTGATCTCCCAGAATTGCTCCCAAAGAAGAAAAAGAAGCCATTTCCTGTTCCAATTAAGAAGATGTTGCAAGCTTCTCGACAAGATAAAAGGCTTGCACGAATGCGAATAGAGAAGCCTCTTGAGCCCCCAAAGAATGGTTTGCTTGTTCCAGAGCTTATTCCTGTAGCTTATGAGGTCCTTGATAACTGGAAGGTGCTCATCAGAGGTCTCTCTCAACTGTTGAATGTTGGTACAGTTTATGGTTGCAGGTAACTAAGGAATGCTAGCCTGTTCCATCAGTTGTTTACATGTGCAATGATATTTGTATTTTCTTGTACATAGGCATGCTTTAATATCCCTGTATGATGGTATATTTTGCCAAGTATCCTGAACTTATGTCATCTGGCTGGTGGTTTGTAGAAAATGCCCCCAAGTCCATGTTGGTCCAGTTGGCCACCAGATCCAAGATTGCTATGGAACAGGAAGCCAACGTCGGAATAGCCATCACTCTTGGGTCAGAGGATCCGTCAACGATGTTCTCATCCCGATTGAATCTTATCATCAATTTGACCCATTTGGGTGGAGAGTCAAGCATGAAACCAGGTTTGACTATGACAGGATTCCAGCCATCGTTGAGCTATGCATTCAAGCTGGTGTTGAGTTGCCACAATACCCCTCAAGGCGACGAACTGCTCCTGTCCGGATGATAGGCAAGAAAGTGATCGACCGTGGTGGGTTTGTTGACGGGCCTAAGCCACACCGTTCAGAAGACTGCATATCTCTGCTTGCTGAACTTGACACATTCAGCAACCAGCAAGGCCAGTCATCGATGCCATCAAATGTGGAAGAGCTCGCGGAGAAAACACTGAAAGCATACTTAAATGTCCAGCGAGGTGTTGCACGGTTGATGAGGAAATACACAGTAAAAACATGCGGGTATTGCTCTGAGGTTCACGTTGGTCCATGGGGCCACAATGTGAAGCTCTGTGGGGCTTTCAAGCACCAGTGGAGGGACGGCAAGCATGGATGGCAGGATGCAGTGGTGGATGATGTCATCCCGCCAAATTATGTGTGGCATGTCCGTGACCCCACTGGCCCTCCTCTCAGATCCTCTCTAAGGAGTTTCTACGGCAAAGCTCCAGCCGTGGTTGAGTTGTGCGTGCAGGCAGGAGCTGAAATACCTGAAGAGTACCGGCCGATGATGAGAGCTGATGTCGTCATCCCAGACTCAGAAGAAGCTAGGTTGGCTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017122