BGIOSGA017130

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Revision as of 04:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017130| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017130, complete gene.| tag = H0818E1...")
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Gene Name

BGIOSGA017130

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017130, complete gene.

LocusTag

H0818E11.3

Ensembl Transcript ID

BGIOSGA017130-TA

Ensembl Protein ID

BGIOSGA017130-PA

Length

4064

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30349266..30353329

Sequence Coding Region

30349266..30349429,30349521..30349838,30350385..30350488,30350885..30350925,30351038..30351215
,30351744..30351905,30352378..30352511,30352890..30352966,30353278..30353329

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30349266..30353329 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30349266..30353329 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCTCCGGCGATGCCGCCGTCGTCTCCGGCTCCGGCAACCGCAAGCGCAAGCGCCATGTGCAGCAGCACTCCCTCGAGTACCCCTGCGTGTCGCGGCTCCGCCACCGTCGCCTCCTCGCCTTCCTTAGCCGCCACGACTACGACTCCACCTTCGACGCGCTGGTGCAGGAGACGTCCGTGCTCTTCCGCGTGGGGCACATCCAGGCGCTGGTGAGGCAGGGCCGGTGGGCGGACGCCGCCAGCTACGTCAACCGCTTCGTGCCGCCGTCTCGCGTGCTCACCGATGCCGGCCTGGTCTTCCACGAGTTCCTCTACATCCACCACGTCCTCGACTGCATCGTCGCCGGCGACCACTTGCGGGGCGCTCAGGTGGCCGCCAGCTACCAGCGCCACGTCAGGGACAACCCCAACCCCTCCCATGGCGCCATCAAGCTCATACGCATCCTCCTCACCATTCTCCACTGCCATCCAATCAGGGCGTTCCTCAACTGGCATCTGGTGAGGTACAAGGCGGCCGAGATCATCAAGGACTTGATCCCTCAGATCCCCGAGTTCAACGACCTGCTAAAGCTACCGAAAGGCTGCCCTCTTCTACTATCTGTCAGGAGAGATATTACACAGGATTATCACGTAATGCAGCAAACTGGCTTGCAGATATCATCGGTAATACTTGTTTGCCTTGTGTCTCCTGCCTTTGTTGACTTCCCATTGTCACTTGACTTCCGAACCTTTTCAGACAAATCTTTGCAAGCTGGTGTGCTGCGTGATGGATATCCATTTAAACACTCCTGTAACGAAGCAATTCAGATTTCAAAACGCATTGAGCTTAGTAGTCTTGCTACACTTGGTGGGTACCTGCTGTCATTTCTAATTCCTGAAAACATTGCAGGTGTTACTGGTGCTCCAATTGGTTTGGATAGTCCTGCTAACAGTTATGGGATCTCAACACAAACTATTGCAGACATGATGCGTCCGTTGATCATTAGTGATATCGGTCAAGGTTCAGTTGCAAGAAACAATCCAACAAGGCCAGAAACAACTGCTCACCAAGCGATTAGTCCAACAACGCAACAGATAACTACGGAGTTTGTTCAACATTCAGAATCACAATTTCAAGAATACAACTCCCAGATGGATGGAAGAGTCAGAATTGTTGAAAGTGGCATGAAAAGGTCGCGTTCCTTCGGTGGTGGTTGCAGCTCATCCGTTGAAATTTCGAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MELSGDAAVVSGSGNRKRKRHVQQHSLEYPCVSRLRHRRLLAFLSRHDYDSTFDALVQETSVLFRVGHIQALVRQGRWADAASYVNRFVPPSRVLTDAGLVFHEFLYIHHVLDCIVAGDHLRGAQVAASYQRHVRDNPNPSHGAIKLIRILLTILHCHPIRAFLNWHLVRYKAAEIIKDLIPQIPEFNDLLKLPKGCPLLLSVRRDITQDYHVMQQTGLQISSVILVCLVSPAFVDFPLSLDFRTFSDKSLQAGVLRDGYPFKHSCNEAIQISKRIELSSLATLGGYLLSFLIPENIAGVTGAPIGLDSPANSYGISTQTIADMMRPLIISDIGQGSVARNNPTRPETTAHQAISPTTQQITTEFVQHSESQFQEYNSQMDGRVRIVESGMKRSRSFGGGCSSSVEISS</aaseq>

Gene Sequence

<dnaseqindica>1..164#256..573#1120..1223#1620..1660#1773..1950#2479..2640#3113..3246#3625..3701#4013..4064#ATGGAGCTCTCCGGCGATGCCGCCGTCGTCTCCGGCTCCGGCAACCGCAAGCGCAAGCGCCATGTGCAGCAGCACTCCCTCGAGTACCCCTGCGTGTCGCGGCTCCGCCACCGTCGCCTCCTCGCCTTCCTTAGCCGCCACGACTACGACTCCACCTTCGACGCGTAAGCCCGAGCACCACCAATCTTCCTCCTCCTCCTTCATCCTCTCGATCTCTCGCCTCGCCTCAATGGCACCGACTTGTTTGCAACGCAGGCTGGTGCAGGAGACGTCCGTGCTCTTCCGCGTGGGGCACATCCAGGCGCTGGTGAGGCAGGGCCGGTGGGCGGACGCCGCCAGCTACGTCAACCGCTTCGTGCCGCCGTCTCGCGTGCTCACCGATGCCGGCCTGGTCTTCCACGAGTTCCTCTACATCCACCACGTCCTCGACTGCATCGTCGCCGGCGACCACTTGCGGGGCGCTCAGGTGGCCGCCAGCTACCAGCGCCACGTCAGGGACAACCCCAACCCCTCCCATGGCGCCATCAAGCTCATACGCATCCTCCTCACCATTCTCCACTGCCATCCAATCAGGTACGACTACAACAACACTTTTTGTAGAGTAGATCAGGATTAATCCTATCGGTTCAGCGGATTTGATCGGGCCTCACCGAAATACCGAAATTTCGGTCTGAAATTTTAAACAAAATTTAGTTGAATTTAAATAAATATTACCAAAATTCATGAAAAAATTAAAAATTTTCGGCCGAAGTAATATCGTATCGGAGGGGAAATTTCGGTCCGAAATTTCCAACCCTAGAGTAGATTAACTTAACAGCCCAATGGGTTGATTATGGGAGGGATTTAGGGAGATCGGTGTAACAGATAACAACAGAGACATATATAAGTCTTAACAGTTCTTTTTTTTTAAGAGAAAGACAATTTTTACCTAGCCTCAACATCCAACCGGATATATACAGCCCTTTAAATTGGGAACTTACCCCATCAAATAAGGAACTTAGCCCTCAACACTGCAACCAGCCCTTTCACAAGTCTTAACAGTTTTGCATGCTTAATTTACTGTTTTCCAAGCATCTTTCACCATCCATCTCTTTCTTGGAACGGAATTATTATGCATAGGGCGTTCCTCAACTGGCATCTGGTGAGGTACAAGGCGGCCGAGATCATCAAGGACTTGATCCCTCAGATCCCCGAGTTCAACGACCTGCTAAAGCTACCGAAAGGTGGCCCCATCAAGCCACACAACATCCTCCCCATTGGGTCCAGTTAATGCTACTTCCTTCGATTTATACTGCAGTAATTCAGCAGCTGATCTGAATTTGGTGACCCTTTGTGCCCGCATTGCTCCATATGGATCACTATCAGTGTACAGCTGATTTCCATTGTCAGTATGTATCAACTGCTGTGACTTCATTTTATATATTAACTGAAAATCTTTGCTACTAGTTCTCATCGGAGGCGCCACGTGAAGAATGAAGACCGGATTCCAGCACCTGATATTGCCCGCTTCTATCTTCAGAAGAAGAGAGGGTAGACCACAATTCAATTTCTCTCCATTTTTTCCACTGTTTCAGGATTTTCGACATTGACACACATGACACGTGCATTGCTTTGTGCAGGCTGCCCTCTTCTACTATCTGTCAGGAGAGATATTACACAGGTATATAAGTTTATAAATCGATTATATCTCTCCATATTCATATCTAGATTTAATAAGCAGAACCAGCAATATTATTAGGCATGATACTTATAACCATGTTTTTCAATGTCAGGATTATCACGTAATGCAGCAAACTGGCTTGCAGATATCATCGGTAATACTTGTTTGCCTTGTGTCTCCTGCCTTTGTTGACTTCCCATTGTCACTTGACTTCCGAACCTTTTCAGACAAATCTTTGCAAGCTGGTGTGCTGCGTGATGGATATCCATTTAAACACTCCTGTAACGAAGGTAGCTGAAAACAGTTATGGAGTATTTGCTCAGATAAATATCGGTACCATTTTCTTTGCGTGAAGTTCATTGGAGCCTTTTTGGCCAATTATGCATAAGATTTCTTTAGCTGCTTTCGAGTTTGACCTCTCCTTTCCTTTCAATTTAAGTGTTGGCTTTGTGCGCAGGATGTTTAGAGAACATAGAGAAACTCATATAAAATGGCAATGAACTAGTCAACCAGCCCATCATAATTCGTTTTTTGCACTTGACTTTATCAGTGTTACAATTTACAATAATTTGTTTTCTCTTAATCAAACAAATTCACTGTGTTCTATGCTTAGATCTTCCTGTATTATGGCCTATATATTCACCTGACACAGCATGTACATGCTGTTGGCGCTGCTTATTTTTTGTTCTTGCTACATCTCTGGGCCTATTTGTAGGACCATGTATCAATCTTTTAAAACCCTTTGTGGAAACAGATTTCGTTCAGTGGTCCATCGAAGCATTTAGATGTTAATTGATTTCCAATTTTCTAATTGTTAGCAATTCAGATTTCAAAACGCATTGAGCTTAGTAGTCTTGCTACACTTGGTGGGTACCTGCTGTCATTTCTAATTCCTGAAAACATTGCAGGTGTTACTGGTGCTCCAATTGGTTTGGATAGTCCTGCTAACAGTTATGGGATCTCAACACAAACTATTGCAGGTAAAATGTATTAGTAATAACATCCCATGCCAACAGCCATATTTCAATTTCATTATTCAATTATATAGAGCAGCATATTGTTTCTTGGTCACATGCATATGTTTTGTATTACAATTCCTGCTAAAATGATGGAATACCATCAAATTCTTGCATGTGAATTAAGTGCACACTCTTACTTGATAGTTATCATTGAAGCCCAGGCACCATGAAGCCCCAATTTAGCGTCCTATATATGTACTATTAGGATTATTATCATTGTTAAAAGTATATCGCTGAGTCAGCATTTTTTTCTTTTTGAGGGAAATCACATCTGTAAAATCAAATGGGAACAACCCTCTCTTTTCATCTATAACTATAATATATGAAATATATATTGTCAGGAGAATATTAACCATGTAGTTGAGTTGGTAATAATATACCACAATGATGCTTACTCCAGGATTCCAGCTAACTTGAGAGTACTTCTGTGCAGACATGATGCGTCCGTTGATCATTAGTGATATCGGTCAAGGTTCAGTTGCAAGAAACAATCCAACAAGGCCAGAAACAACTGCTCACCAAGCGATTAGTCCAACAACGCAACAGATAACTACGGAGTTTGTTCAAGTAAGCATCACTTGGCACTTTCTATAAACAAGAAAAAATTGACTGCAAAAATGAATAAATAAGTTCAGTACTGTACCTCACCTTAGTCATCTACAATAGGCCAACGATTGCTTACTGATTTCCAACTGCTGCTCTTTTCTACGAATAATTTTGTGCTACATATGATCTCTTGTTCATGAACCATGATCGTGGATCGCATACAAATTTGTTTTCTTTTTGTTGTGTGTGTTCTTTACTTCTTTAGGGTGGGGCATGTGGAGTTATCACTAGCTTGATTCAACATCAAACGCAGAGTATATTTTCACAAAATATTTCTATTATTGCATTGGAACCTTGCCAATTGATAGGGCAGTAACAATACTTACTTCTTTTACTCAGCATTCAGAATCACAATTTCAAGAATACAACTCCCAGATGGATGGAAGAGTCAGAATTGTTGAAAGTGGCATGAAAAGGTATACATTGCTAATCCAATCCTTCATGCATGGAAACAAATCTGGTTTCTAAGGTTTACTGTCAATCTCCAAGTAGTTTCAACAATGCTTTTACTGGATTTTGAATACTGGGACCCTTGGAGGGGCTTACATTAGCAGAATTTGCCTATTTTATTATTATTTCCAATTCGTGAGTTTTCTGTTTCTTCCCTATGGATTCTGTGATTATTTAATTTACAATGTGTGGCATCATTCAAGTTTGGCTTTGATTTATTTCCAATCTTCTGCATATATGAGAAATGTAGCAAGTTATACTCAATTTTTCCGTCCAGGTCGCGTTCCTTCGGTGGTGGTTGCAGCTCATCCGTTGAAATTTCGAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017130

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017130&oldid=66024"