BGIOSGA017148

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Revision as of 04:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017148| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017148, complete gene.| tag = OsI_174...")
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Gene Name

BGIOSGA017148

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017148, complete gene.

LocusTag

OsI_17455

Ensembl Transcript ID

BGIOSGA017148-TA

Ensembl Protein ID

BGIOSGA017148-PA

Length

5066

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30561992..30567057

Sequence Coding Region

30561992..30562073,30562161..30562336,30562982..30563083,30563175..30563405,30564252..30564344
,30564436..30564540,30564616..30564675,30564782..30564859,30564939..30565085
,30565172..30565270,30565339..30565428,30565521..30565612,30565690..30565807
,30565941..30566029,30566156..30566246,30566362..30566453,30566683..30566909
,30567026..30567057

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30561992..30567057 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30561992..30567057 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGTCAAGCAAGAAATCTGCTGTTGAAGTTGCACCTACCTCTGTCTCAGTCTCAGAGGGGAAATCTGGGAAGAAGGGAAAGAGAAATGCAGAAGATGAGATTGAGAAAGCTGTGAGTGCCAAGAAACAAAAGACTGTACGTGAGAAGGTTGTGCCCTCAAAGGAGGAAGCCAAAAAAGTGAAGAAGCAGCCCCCACCGAAGAAGGTTGAGAGCAGCAGTTCTGAGGAGGATTCTTCAGAATCTGAAGAGGAGGTAAAGGCCCAACCAAAGAAGACTGTCCAACCGAAGAAGGCTGCACAACCTGCTAAAGAGGAGTCAAGTGATGATAGCAGTGATGATAGCTCCTCAGATGATGAGCCTGCGAAAAAACCTGTTGCTCGTCCAAATAAGGCTGCACTTTCTACCAACAGTAGCAGCAGTGATGATAGCAGTGATGAGAGTTTATCAGATGATGAACCTGTGAAAAAGCCTGCTGCCCCTTTGAAGAAGCCAGTTGCACTTGCTACCAATGGATCAAAAAAGGTTGAGACAGACAGCAGCAGCTCTGATAGCAGCTCTGATGAGGAGTCTGATGAGGATGATAAAGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGTGAAAGCTCTGATTCTGAAAGTGATTCAGACTCTGATGATGAGGCTGCTAAAACAATTATTCCTGCCAAGGCTGCTGCTGTTAAAAAGGAAGAAGAATCCAGTGATAGCTCAGACAGTGACTCTGAATCTGAGTCTGATTCTGATGAACCAGCAAAACCTACTATTCCTGCAAAAAGGCCACTGACAAAAGACACAAAGAAGGGACAATCCAAGGATGAATCTGAAGATAGTTCTGATGAGAGTTCTGAGGAAAGTGATGATGAACCTCCGCAAAAGAAGATTAAGGATTCTACAACTTCTGGTACTACCAAGCCTTCCCCTAAGGCTACCAAGAAAGAAATCAGCAGTGATGACGAAAGTGATGAAGATGACAGTTCTGATGAAAGCTCTGATGAGGATGTTAAGCAAAAACAAACTCAAGCTAAGAAGGTGCAAGCACCAGTAGCACAAGAGAGTAGCAGCTCCGATGAATCTTCTGAAGAAGATAGTGACATGGAAAGTGATGAACCAGCAAAAACTCCCCAAAAGAAGATTTATGTTAGTAAAAGCTTCTTTATCCTTCAGGAAACTGCTGTGTCTGTTGGTTCGAATAAGTCTGCGACAAAACTGGGACAAGAGGAACCAAAAACGCCTGCCAGCAACCAAAATCAAGCTACCGGGTCAAAGACTCTTTTTGTTGGAAATTTACCATACAATGTGGAGCAAGAACAAGTGAAGCAATTTTTCCAGGAGGCAGGTGAAGTTGTTGATATTCGTTTCAGTACCTTTGAAGATGGGAACTTCAGGGGCTTTGGACATGTTGAATTTGCCACAGCGGAAGCTGCTAAGAAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGGCCGGTCAGGCTTGACCTGGCTCGTGAGAGAGGCGCGTATACTCCTGGCAGCGGGAGGGACAATAGTTCTTTCAAGAAGCCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTTTGATACTTCTCTTGACATACACCAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGGCGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCGTGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAG</cdnaseq>

Protein Sequence

<aaseq>MGKSSKKSAVEVAPTSVSVSEGKSGKKGKRNAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSSEEDSSESEEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPVARPNKAALSTNSSSSDDSSDESLSDDEPVKKPAAPLKKPVALATNGSKKVETDSSSSDSSSDEESDEDDKDVPTKAPAVAKKKEESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDSSDSDSESESDSDEPAKPTIPAKRPLTKDTKKGQSKDESEDSSDESSEESDDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDEDDSSDESSDEDVKQKQTQAKKVQAPVAQESSSSDESSEEDSDMESDEPAKTPQKKIYVSKSFFILQETAVSVGSNKSATKLGQEEPKTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALELAGHDLMGRPVRLDLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGLYVDEARPRPDNNREGGFSGGRDFNSSGRGGRRGGRGDGSRGRGDRGRGRGFGRGDRGRGGRGTPFKQSAGTPSAGKKTTFGDDD</aaseq>

Gene Sequence

<dnaseqindica>1..82#170..345#991..1092#1184..1414#2261..2353#2445..2549#2625..2684#2791..2868#2948..3094#3181..3279#3348..3437#3530..3621#3699..3816#3950..4038#4165..4255#4371..4462#4692..4918#5035..5066#ATGGGCAAGTCAAGCAAGAAATCTGCTGTTGAAGTTGCACCTACCTCTGTCTCAGTCTCAGAGGGGAAATCTGGGAAGAAGGGTAACATTTGTATACTCTTGCCTCTCATGTCTTATTGTTTATTGCAGTTGTTCAGTTCTATCTAAAATTTTTTTTTATAACAAGCAGGAAAGAGAAATGCAGAAGATGAGATTGAGAAAGCTGTGAGTGCCAAGAAACAAAAGACTGTACGTGAGAAGGTTGTGCCCTCAAAGGAGGAAGCCAAAAAAGTGAAGAAGCAGCCCCCACCGAAGAAGGTTGAGAGCAGCAGTTCTGAGGAGGATTCTTCAGAATCTGAAGAGGAGGTAACTAGTTCAATCTTCCTCAATGTAGCTTGCTGATATTCTCTTAATCTGACTTCTGTTTAGAGTCTTAGTTCAATATAGGTATTGTATATCAGATGATTGATTGCTTTGCTTACTATTATAAGATTCATGGTATTTGTGACCTTGAATGCTCAGGATTAAAATTGGCTGATATTTTCTCCGACCACCTGTTTTATCTCAGTAGCTTGCACTATATCTCAGTATTTCTCCTATATTTATACAACTTTTATATTTTATTATTTATACTATCTCGTTTGACTTTCTTCTTGAATGCCTTGGGCTAAAGTGTTATTACAAATGTTTGCTTTGAGGAACTAATGAATTTTTTGGAGGAACTAATGAATCAGTAGAAGTAGCAGAAATTGTATTATTATCTATATGCTGTCAAGCTGTAATTTTGACCTCTGAGATTGAATAGTTTGAACATTGGTTAAACAGTAGAAGTTTTCCTCTTTTGCCTCAGTCTCATATGAAAATAGGTCATTTCATATTGAAGATGCATGTTTTCTTTCGTTAACTGTTTATTTTGTGTAGTTTCGTGTGTTCCAAATTATAATGAACATGGAGTTTTTTTTTTCTTTGCACTGCTTTCTTCCTATTAATTATTTTCAAAATTCTTTGCAGGTAAAGGCCCAACCAAAGAAGACTGTCCAACCGAAGAAGGCTGCACAACCTGCTAAAGAGGAGTCAAGTGATGATAGCAGTGATGATAGCTCCTCAGATGATGTATGCTTTTTTTATCTGTTTTTTGCGAGTGGGTTTTGTTTACTTTTGTTGCTAAGAAGCTTATGGTTTACTTTTTATTTTTCTAATCCAGGAGCCTGCGAAAAAACCTGTTGCTCGTCCAAATAAGGCTGCACTTTCTACCAACAGTAGCAGCAGTGATGATAGCAGTGATGAGAGTTTATCAGATGATGAACCTGTGAAAAAGCCTGCTGCCCCTTTGAAGAAGCCAGTTGCACTTGCTACCAATGGATCAAAAAAGGTTGAGACAGACAGCAGCAGCTCTGATAGCAGCTCTGATGAGGAGTCTGATGAGGATGATAAAGTGAGTATTTGTTTCCCATTTTAACTTGGAAGGACAGTATTCATTGTTTCTTTCTCTTCATTCATCATTGGCCAAACCTATTGTGCTGTACCATCTCTATTTTGCTATCATGAATATGATTTGTAAAATTTGAGATTTTATTACTACCAGCTATATTAATTTCTTGTTTGATCTATTCTTTGTCTATGTGCATATCATCTGCATATGCATTATTGTAAGATTTAATATCCCCTGATTTTTAATGCTCTTGGTTCTGAAGCTTTACATCTTACACCAACAGTTCAGCAGAGCTCATAAAGTTATATGTTCTGTTTCAGTATTTTGTGAATTTCGTATCATCAATTATATCGGTCATATGATACATTATTATGCTAAATATATGAAGGACAGTATGTATAAAAGGCAGTTCGATGTGCCTGAATTTCTACCAAATCTTTGAATTGAACACATCTGTTTGGTTGACTTGAAGCGTTGCAATTTCTACACTGTTCTTCTGTTTCTCTTCTTGGTTCTTATTCCAGAAAATCTTTTTGTCTCATTACACTAACAAGCTTGTTGCATATCCTTGATTTCAGAAAACTGCTGCTCCAGTGAAGAAACCTTCAGTTGCTGCTATACAAAAGAAGACCCAGGAGTCTGACAGTTCTGATAGTGACTCTGATTCTGAATCAGATGAGGTAAGCGACCATACAATTTGTGTTGCACTGCTATGTAAGATTCCAAGTGCTCGGGTGGCACACAGCTATTGCTTCCCTTCTCCTGATATTATGACTTAATATTTGGAGTGTTGATAGAAGATGTTTACATAAAATATGTTTCTTGATCTGACTAGAGCAATATCTACAGGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGTGAAAGCTCTGATTCTGAAAGTGATTCAGACTCTGATGATGAGGTGGGCACCTTAATACTGTTATAGTGATGTTGACAGAGGCTTTGTTATCCATAGATATTTTTTTTTGTATGCAATTACATTGCCTGTGAAGGCTGCTAAAACAATTATTCCTGCCAAGGCTGCTGCTGTTAAAAAGGAAGAAGAATCCAGTGATAGCTCAGACAGTGACTCTGAATCTGAGTCTGATTCTGATGAAGTACGTGTGCTAGCACTTGTTACTTTTGATTACTAATTGTTGTGCAATATTAAAATCTTACCCAATGTCTTGCAGCCAGCAAAACCTACTATTCCTGCAAAAAGGCCACTGACAAAAGACACAAAGAAGGGACAAGTATGCTTTCTTTTTCTGAAGTTTGTTTCCAAGTACGAGTAAAATTGTCTCATGTGCTATTTTTCCTGTGATAATCTTGGCCTCTTGGGGGTACACCTCGTTGCAGTCCAAGGATGAATCTGAAGATAGTTCTGATGAGAGTTCTGAGGAAAGTGATGATGAACCTCCGCAAAAGAAGATTAAGGTACTTATTTTTCTTTTTGTTTTGCACATTTTAATGTTTTTTTATTCATGATTACAATTGCTATCTCTTCGGACTCCAGGATTCTACAACTTCTGGTACTACCAAGCCTTCCCCTAAGGCTACCAAGAAAGAAATCAGCAGTGATGACGAAAGTGATGAAGATGACAGTTCTGATGAAAGCTCTGATGAGGATGTTAAGCAAAAACAAACTCAAGCTAAGAAGGTGGTCTGCAGACTTAAGACGCCTAGGTTTTTCTCATTTATGTATGTGGTTACTCTTTAACTCTATGTTGTTGTTGTCTGAAATTGTAGCAAGCACCAGTAGCACAAGAGAGTAGCAGCTCCGATGAATCTTCTGAAGAAGATAGTGACATGGAAAGTGATGAACCAGCAAAAACTCCCCAAAAGAAGGTACTGTATATTGTAAAATTCGTGCATATGATTTCTTTGGACATCACATTGTTCTTCAACTATAGCAGATTTATGTTAGTAAAAGCTTCTTTATCCTTCAGGAAACTGCTGTGTCTGTTGGTTCGAATAAGTCTGCGACAAAACTGGGACAAGAGGAAGTATGTTTCCACTCTTGATACTGTTATTCTGCAATGTTATCTTTTATGTTTGATGTCTGTTGGACAATCAGTTTTAACCTCATTAATTGCAGCCAAAAACGCCTGCCAGCAACCAAAATCAAGCTACCGGGTCAAAGACTCTTTTTGTTGGAAATTTACCATACAATGTGGAGCAAGAACAAGTGTAAGTTTGTGAAATGTGTTTATAATTCCTTCTGTCTCAAAGCTATGTCTGCTAATTTCATTGTTCACTTCCTGTAGGAAGCAATTTTTCCAGGAGGCAGGTGAAGTTGTTGATATTCGTTTCAGTACCTTTGAAGATGGGAACTTCAGGGGCTTTGGACATGTTGAATTTGCCACAGCGGAAGCTGCTAAGAAGGTCAACATCCTCATCAATATTTTTTGGTGACTTATTCAGTATATAATATATTGGTTCCATGGACATGAAGAAGCAGTTTATTGCACCAAGTTTAGCCAATCAAACTTATTAGCCATCAATGTTTTATTTTCAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGGCCGGTCAGGCTTGACCTGGCTCGTGAGAGAGGCGCGTATACTCCTGGCAGCGGGTAATTCCTTATCTTGTGTTGTATGCATCAGAAAAGAAAAAAAGAATTCAAATATGCTTTGGAAAAGATCGTTGTTTGTCTTTCGCAATGTAAATGGGGCCATGATAGTTTTGTGTAATTGCTCAGGAGGGACAATAGTTCTTTCAAGAAGCCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTTTGATACTTCTCTTGACATACACCAGGTAAGTTCCATTTTATCCTCACGGTGCTGTATTAGAAATTTTTACTGATTGTGTTGTCTACTTTTCTTTTTCTGAACATGCACTATATGTTTCATCTGCTTATTTTCTTTACTAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGGTCAGTTGCCTCTGTTACGTTTATTTAACACATTACACTTTGTTAATGCCCTTTGCGGAACACAGTATTCTCTTCGTTTTTGACCCCTGCACTTGGTGTAGCCCTATCTATTATCGTCACTGACATGTGGCTTGCTTCCTGATGCAGAATAAGCATACATGGATTTTGCAGACAACGGTTCCTCGTCGAAATCATTTGAGCTGAATGGATCTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGGCGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCGTGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGTAAAACTTCTACCGCACCAAATTGCAATTTACCCAGCTTTTACACTCGCTGCTTGGACTTGATGTAGGATAAGTGGAGCTGTCATAATTAATACTATTTGCTTTCTTATCTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017148