BGIOSGA017164

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Revision as of 04:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017164| Description = BGIOSGA017164| Definition = Oryza sativa Indica Group BGIOSGA017164, complete gene.| tag = | tid = BGIOSGA017164-TA|...")
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Gene Name

BGIOSGA017164

Description

BGIOSGA017164

Definition

Oryza sativa Indica Group BGIOSGA017164, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017164-TA

Ensembl Protein ID

BGIOSGA017164-PA

Length

2301

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30729320..30731620

Sequence Coding Region

30729320..30729459,30729669..30729793,30729881..30729927,30730171..30730295,30730456..30730522
,30730610..30730672,30731241..30731345,30731435..30731620

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30729320..30731620 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30729320..30731620 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGATGGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTGTTTCAGCCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MALVTNVCEYEELAKHKLPKMVYDFYAVDAEDQWTLRENSEAFSRILFQPVVLVDVSCIDMSMSVLGYNISMPIMIAPTALHKLAHPEGELATARAAAAAETIMIYKDRNLVQQLIQRAEKAGYKAIVLTVDAPWLGRREADVKNRFTLPQNVMLKIFEGLDQGKIDETNGSGLAAYVASQIDRSFSWKVVREANGRVPVFIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRMLRDELEITMALSGCTSVKEITRGHVVTESDRIRRCSRL</aaseq>

Gene Sequence

<dnaseqindica>1..140#350..474#562..608#852..976#1137..1203#1291..1353#1922..2026#2116..2301#ATGGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGATGGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTGTAAGTTGTGCTCTAAATTGGTAGGGAATATCTGAAAATGGAGATAGGGAGGTCCTGATTTTGTGTTATATTCATAGAAGTTATTGTTAGGATGTAGCTTTTAGTTATTTTCATTTGACATTGTGTTTTGATTTTGAAATAAAATATATTACCCATTACTTCGTCTTTCAAAGTATATTATGGTGTCCTTTGTGGATAAATGATGTTAGGTTTCAGCCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGTTCTGGTTTGCTACCTTTATATCTTTCTTTTGGCAATCGCATATTTCAATGAGAAGTTCCTTTAGGGATATTTATCTGGAATGCAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGGTTTGAAAGATCGTAACAAATTTTATGCATTTTGATATCTATGTCTGACACATTGATTCACCAACTAGTCATATTTTCAGACATTGTCTTCATGGTCATCTTGTAGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAGTATTACACTATTTTCTTTCTTAGATTCTTCACCTTTCTTCTTTAGGATTTATGCTCCCTTACTTCTTATCAATGTCTTGTTCAGATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTCCTCATCGTGCAACCGTAGTGTTTGACTTGTGCATTATGCATTATTTAATGAAAATCTGTACCCTGCATCAATATCCTTTTCTTAAAGGCACCTTTATTGAAAGAAGAAACTCCACCGCAAACTCATTATCTGCATTATACTTTACATTACATTCTAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGGTTGTCTAAAAACTAGTGCCATTGTGTGAAGTAGTCATGATTCTGTTTAACAATGCCCTGAATCATTCTATTTATCTGATGTTTCAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGTATTGCAGTGACACTATGACTTGTAATTTCCAGATAACAACCAGTTAATATGAAAGATTTTAACCATCAGAACAATGTCATATCTCAGACAATTCTTAATGTGAATGAAACCGTGTGATGTTGATGACTCATCCTACAATACAGGATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAGCACAAGACAGTATGTCCTTTGCTTTCAATTACCTTGTGTAACTACATGCCTCATTATCCAAGCTGCAGATCTCACAAGACATTTACAAAAATGCAGCTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATGGCGGCCGCCAGCTAGACTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATATGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCGGCAATCAGCTGTGTAGAAGAGGTATGCCATTGATAACCCAATCTGCACTTCGGCTTATTGTGCTTTTAAACACATTTTAACTGAAAACAGCACGAATCTCAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTGTAAGTCCCCTAGCTAGCTACTGCTTGAATGAAAGATGATGCTGAATTGCTCATGACACGGCATCTGCATACGCTTCTTGTTCTGTCAGATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017164