BGIOSGA017208

From RiceWiki
Revision as of 04:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017208| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017208, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017208

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017208, complete gene.

LocusTag

OSJNBB0034I13.13

Ensembl Transcript ID

BGIOSGA017208-TA

Ensembl Protein ID

BGIOSGA017208-PA

Length

1907

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31356664..31358570

Sequence Coding Region

31356664..31356786,31356915..31356989,31357175..31357234,31357346..31357423,31357512..31357575
,31357689..31357969,31358096..31358329,31358418..31358570

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31356664..31358570 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31356664..31358570 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGCGTACGACCGGCCTCCGCCAGTTGGCATGTGGAGTCACGAGCAGTTCAAGGTTGACAACGGCCAGGCCACGAGTGCATCCACGATCATGGAGGCAGAGATGAAATTTGAGAATAGGCTAGAAGAAATTCCCCAAGTAGTTCTGGAGGAAGGGAGAAATGTTGATCAGGAGGCAAGCAAGCCGCCAGACAAGGTCCTCAGAAGACTTGCACAAAACAGAGAGGCTGCACGGAAAAGCCGCCTGCGGAAAAAGGCTTATATCCAACAGCTGGAGACAAGCCGGTTGAAACTAGCGCAGTTAGAGCAAGAGCTTCAACGGGCCAGGCAGCAGGCTGTGTATGCAAATGGGAGCCTTCGAGAACCAAATCTTGGATTTACAGGACCGATCGATCCAGGTGCCTTAGGTTTTGAGATTAAGTACAGCCATTGGGTGGACGAGCAGAATCGCAACACTGGTGAGCTGAGGAATGCGCTGCTGCAGGGGCAGACGACGGACCAGGACCTGGAGCTCAAGTTGCTCGTCGAGGCTGGGCTCGACAACTACAACCGCCTCTTCGAGATGAAAGAGGAAGCCGCCAACTCCGACGTGTTCTACATCATGTCGGGCATGTGGAAGACCCCCACCGAGCGGTTCTTCCTGTGGATCGGTGGGTTCCGGCCATCGGAGGTTCTCAAGAATTTGAGACCGCAGCTGGAGCCTCTGACGGACAAGCAGGTCGTGGAAGTGGGCGGCCTGCAGCAAACCTCGATGCAGGTCGAGGACGCCCTCTCGCAGGGCATGGACAAGCTGAAGCAGACGATCGCGGACTCCCTGACGGCGGCCGACCCGTTCGACTCCCCCGAGGCCTACATGGTGCACATGGCCAACGCCGTGGAGCAGCTCAGATCCCTCGTCCAGTTCGTTACCCAGGCAGATCATCTCCGGCAGCAGACGCTGCAGGAGATGCACAGGATCCTGACGACGCGGCAGGCGGCGAGGGGGCTCCTCGCGCTGGGGGACTACTTCCAGCGCTTCCGAGCGCTGAGCTCGCTATGGGCAGCTCGCCCGCGCGATTCAGGATAA</cdnaseq>

Protein Sequence

<aaseq>MGAYDRPPPVGMWSHEQFKVDNGQATSASTIMEAEMKFENRLEEIPQVVLEEGRNVDQEASKPPDKVLRRLAQNREAARKSRLRKKAYIQQLETSRLKLAQLEQELQRARQQAVYANGSLREPNLGFTGPIDPGALGFEIKYSHWVDEQNRNTGELRNALLQGQTTDQDLELKLLVEAGLDNYNRLFEMKEEAANSDVFYIMSGMWKTPTERFFLWIGGFRPSEVLKNLRPQLEPLTDKQVVEVGGLQQTSMQVEDALSQGMDKLKQTIADSLTAADPFDSPEAYMVHMANAVEQLRSLVQFVTQADHLRQQTLQEMHRILTTRQAARGLLALGDYFQRFRALSSLWAARPRDSG</aaseq>

Gene Sequence

<dnaseqindica>1..123#252..326#512..571#683..760#849..912#1026..1306#1433..1666#1755..1907#ATGGGGGCGTACGACCGGCCTCCGCCAGTTGGCATGTGGAGTCACGAGCAGTTCAAGGTTGACAACGGCCAGGCCACGAGTGCATCCACGATCATGGAGGCAGAGATGAAATTTGAGAATAGGGTGAGGAACACATCCGCTTTGATTTAATTTTGTTTCCTCTAGTATTTTGAGTAGCTATGAGCTGTGGCTTCTACTAATTGCCTGTTGAATGATCGGGTGTTTAATACTCATTTTGATGAGATTTGCAGCTAGAAGAAATTCCCCAAGTAGTTCTGGAGGAAGGGAGAAATGTTGATCAGGAGGCAAGCAAGCCGCCAGACAAGGTGAGCATCACACAGTACAATCCAACCATCTCTGCTCTGCTCCATTATATGAAACCGTGTAATTATTACTCTTTTCCTTTTCTTAAAAGATGCAGTAGAGAAATTCCCAAAACTCACAGTCCATTTCATATGTTAAATTCAGTTTGGTCTTGCGAGATAAAATAATTTTCTGCTTATTTATTCAGGTCCTCAGAAGACTTGCACAAAACAGAGAGGCTGCACGGAAAAGCCGCCTGCGGAAAAAGGTAAAATGACAAGTACTTAACTACTAACATGCTGTCACCATGCTAGATTGTAGCTTTCCCATTTTTGAAAAACAAAATCCTCATTATCGGCATGATTATGGTGTTCCATAGGCTTATATCCAACAGCTGGAGACAAGCCGGTTGAAACTAGCGCAGTTAGAGCAAGAGCTTCAACGGGCCAGGCAGCAGGTACACGGATAACAATTTGTTGTGCAGCCACTTCAGCTTACACTTGTGTCACTGACTCCATTGCAAATTTGCAACTGCTCTGATGCAGGCTGTGTATGCAAATGGGAGCCTTCGAGAACCAAATCTTGGATTTACAGGACCGATCGATCCAGGTTAGGTTTTTTGTTGTGCCGCTCTTTCTGATCACAATGTTCAGCACAGATTTAACATTTTTGTTCATTCTAATTACCAGCTTATGTGGTTTCATCATATTACGTACATGCAGGTGCCTTAGGTTTTGAGATTAAGTACAGCCATTGGGTGGACGAGCAGAATCGCAACACTGGTGAGCTGAGGAATGCGCTGCTGCAGGGGCAGACGACGGACCAGGACCTGGAGCTCAAGTTGCTCGTCGAGGCTGGGCTCGACAACTACAACCGCCTCTTCGAGATGAAAGAGGAAGCCGCCAACTCCGACGTGTTCTACATCATGTCGGGCATGTGGAAGACCCCCACCGAGCGGTTCTTCCTGTGGATCGGTGGGTTCCGGCCATCGGAGGTTCTCAAGGTAGCTAATCGATCTGCACTGCACACATGTACTCCAGAGCTTCAAAACCACTAGTGCCAGTTGATTTTTTTTACATGACATGATGGCAACTCTCTCTCTCTCTCTCGTTGTTGCTTCTGCTATCAGAATTTGAGACCGCAGCTGGAGCCTCTGACGGACAAGCAGGTCGTGGAAGTGGGCGGCCTGCAGCAAACCTCGATGCAGGTCGAGGACGCCCTCTCGCAGGGCATGGACAAGCTGAAGCAGACGATCGCGGACTCCCTGACGGCGGCCGACCCGTTCGACTCCCCCGAGGCCTACATGGTGCACATGGCCAACGCCGTGGAGCAGCTCAGATCCCTCGTCCAGTTCGTTACCCAGGTAACCAAACCAAACCAAAACCAACCGCCAAAAACTCCGATCGCCTCATTGTCTCATTCATCATGGCATCTGGGACTTGTGTGTGCAGGCAGATCATCTCCGGCAGCAGACGCTGCAGGAGATGCACAGGATCCTGACGACGCGGCAGGCGGCGAGGGGGCTCCTCGCGCTGGGGGACTACTTCCAGCGCTTCCGAGCGCTGAGCTCGCTATGGGCAGCTCGCCCGCGCGATTCAGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017208