Os08g0121900

From RiceWiki
Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0121900| Description = Protein of unknown function DUF23 family protein| Version = NM_001067418.1 GI:115474572 GeneID:4344548| Length = 290...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0121900

Description

Protein of unknown function DUF23 family protein

Version

NM_001067418.1 GI:115474572 GeneID:4344548

Length

2907 bp

Definition

Oryza sativa Japonica Group Os08g0121900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1196188..1199094

Sequence Coding Region

1196477..1198038,1198685..1198877

Expression

GEO Profiles:Os08g0121900

Genome Context

<gbrowseImage1> name=NC_008401:1196188..1199094 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1196188..1199094 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttggcggcgaaggagaggaagctgagtaggcttgggagtaagggcagtggcggaggagggggaggtgggagtttcggggcgagggggcagcgggcgccggcggggacgcagcggcggctgttcgcggcgttcttcgcgttcctcttcgccggcgcggtgctcttcggcgccgcgcacgtcattggagcatccttccggcccgtgctcaagaccgcgtggccgtcggccaccctgaacgccgtgtcgtcggagcgcggcgcgcagcaagccggcatggtcagcgtcgacgccgtgttgccttctgttcatatccagcacgcggttgccttgccggaccatgttctcctgatgctcagagatggctcattgctgccggcttcggggcaatttgagtgcctgtactcccctgtcaactcgtcgcagctgcgtcgccagcccttgtccgtcgctaccttgccggatggacccagcctcgtccattgtcccgccggaccatccagggtcgctgtgtccctctcactggcgcagtcggttccggtggcgccgttgcaatgggatcggctggtgtacactgcacttattgacagcaaggacaactccaccgttgtgtttgcaaaggggatgaacctccgtccgggtcgtctaggtgtgccatcacggtacgagtgtgtctttggccgagacttttcgaagccaaagcttgttgtcacctccccagtggtttctgctgctcaggagatattccggtgtgtgacaccagttcgcattcgccggtacctccggatgactaccggtggcaaaaacagcgtaaacaatgatgacaagcctatgttggtctccatcaggactaagggccggggaagctctacactcccctcaatcgcgcaaccggagccgcttcctcggtacaacaagcattggagacgaaaggcacactcaatgtgtgtctgcaccatgcttcgcaaccaagcacggttcctgcgggaatggatcatctatcactcacgtattggtgtgcagcggtggttcatctatgacaacaacagcgacgatggcattgaggaggtcctcaacaccatggattcatccaggtacaatgtgacacgctatttatggccatggatgaaatctcaggaggctggatttgcacattgtgcactcagggctcgagagagctgtgagtgggtggggttcattgacatagatgagttcctgcacttccctggcaaccaaacactacaagatgtcctccgaaattactctgtcaagccacggatcggtgagctcaggactgcatgccatagttttggtccatcaggccggactaagatcccaaagaaaggtgttacaacaggctacacctgccggctggctgcacctgagcgccataagtcaattgtcaggccagacgcattgaacccatccctcatcaatgtggtgcaccacttccatctgaaggaagggatgaaatatgtgaacattggtcagggtatgatgctgatcaaccactacaaataccaagtctgggaggtgttcaaggataagttctccggacgtgtcgcgacatatgttgctgattggcaggacgaggagaatgttggatcaagggacagggctcctgggcttgggaccaaaccggttgaaccagaggattggccgagacgtttctgtgaagtatatgataacggtttgaaagattttgttcagaaagttttcacagacccacacactggaaatcttccatggtag</cdnaseq>

Protein Sequence

<aaseq>MALAAKERKLSRLGSKGSGGGGGGGSFGARGQRAPAGTQRRLFA AFFAFLFAGAVLFGAAHVIGASFRPVLKTAWPSATLNAVSSERGAQQAGMVSVDAVLP SVHIQHAVALPDHVLLMLRDGSLLPASGQFECLYSPVNSSQLRRQPLSVATLPDGPSL VHCPAGPSRVAVSLSLAQSVPVAPLQWDRLVYTALIDSKDNSTVVFAKGMNLRPGRLG VPSRYECVFGRDFSKPKLVVTSPVVSAAQEIFRCVTPVRIRRYLRMTTGGKNSVNNDD KPMLVSIRTKGRGSSTLPSIAQPEPLPRYNKHWRRKAHSMCVCTMLRNQARFLREWII YHSRIGVQRWFIYDNNSDDGIEEVLNTMDSSRYNVTRYLWPWMKSQEAGFAHCALRAR ESCEWVGFIDIDEFLHFPGNQTLQDVLRNYSVKPRIGELRTACHSFGPSGRTKIPKKG VTTGYTCRLAAPERHKSIVRPDALNPSLINVVHHFHLKEGMKYVNIGQGMMLINHYKY QVWEVFKDKFSGRVATYVADWQDEENVGSRDRAPGLGTKPVEPEDWPRRFCEVYDNGL KDFVQKVFTDPHTGNLPW</aaseq>

Gene Sequence

<dnaseqindica>1057..2618#218..410#ggagcctccgcctcctcgccatttacggcagcaaccgcggcggagagagacgaccgaggagagagagagagagagagagagagagagggagagctccagtggtcgccgccggcgaggaggagcagtgaatggtgcggcgcgtggggttagccggcgctcgtggatcgatctgagcgagaggggagctgctggagacagtggtgcgtgcgtccgcggcatggcgttggcggcgaaggagaggaagctgagtaggcttgggagtaagggcagtggcggaggagggggaggtgggagtttcggggcgagggggcagcgggcgccggcggggacgcagcggcggctgttcgcggcgttcttcgcgttcctcttcgccggcgcggtgctcttcggcgccgcgcacgtcattggaggtgagactcgtttttccccctcgcctccgccttggtcgcttctggggacggcggcggagttggttggctgccgccgtggcgtgggggggagttgaattggatcttggttgggtttaggtaggccagtggaatcatgctcccatgacaatcttgtggttggaggcgcggtttggatcgattcaattggactcacgcgaatgatttgagggaaagtttcttttgcatttttgtttatttagatttgtttctggtatgcgtttagtgtttgctgttggggagtggtgaagaaaaagttctctctttcttgtggggttgcaaatcgcgtggcagatctgaggggtctcactgttccaacaaaatttgtagtgtttttttttctcattccattcttgcgtggttcgcgatttccggaatgttacgctggcttgcgagtttactaaattgcaactagtgttgctgctactgccgtttgactgaattgatactgtgaattctgggaatagaaaaggcttatcttggtcacatgaagaacgtttctgttgatgcaatctgaattcacccatgccgaatccgtttggctctttaatttatggacggaatgtgctgtgctaactaatcccatgttcgtgttgtccccctgatgcagcatccttccggcccgtgctcaagaccgcgtggccgtcggccaccctgaacgccgtgtcgtcggagcgcggcgcgcagcaagccggcatggtcagcgtcgacgccgtgttgccttctgttcatatccagcacgcggttgccttgccggaccatgttctcctgatgctcagagatggctcattgctgccggcttcggggcaatttgagtgcctgtactcccctgtcaactcgtcgcagctgcgtcgccagcccttgtccgtcgctaccttgccggatggacccagcctcgtccattgtcccgccggaccatccagggtcgctgtgtccctctcactggcgcagtcggttccggtggcgccgttgcaatgggatcggctggtgtacactgcacttattgacagcaaggacaactccaccgttgtgtttgcaaaggggatgaacctccgtccgggtcgtctaggtgtgccatcacggtacgagtgtgtctttggccgagacttttcgaagccaaagcttgttgtcacctccccagtggtttctgctgctcaggagatattccggtgtgtgacaccagttcgcattcgccggtacctccggatgactaccggtggcaaaaacagcgtaaacaatgatgacaagcctatgttggtctccatcaggactaagggccggggaagctctacactcccctcaatcgcgcaaccggagccgcttcctcggtacaacaagcattggagacgaaaggcacactcaatgtgtgtctgcaccatgcttcgcaaccaagcacggttcctgcgggaatggatcatctatcactcacgtattggtgtgcagcggtggttcatctatgacaacaacagcgacgatggcattgaggaggtcctcaacaccatggattcatccaggtacaatgtgacacgctatttatggccatggatgaaatctcaggaggctggatttgcacattgtgcactcagggctcgagagagctgtgagtgggtggggttcattgacatagatgagttcctgcacttccctggcaaccaaacactacaagatgtcctccgaaattactctgtcaagccacggatcggtgagctcaggactgcatgccatagttttggtccatcaggccggactaagatcccaaagaaaggtgttacaacaggctacacctgccggctggctgcacctgagcgccataagtcaattgtcaggccagacgcattgaacccatccctcatcaatgtggtgcaccacttccatctgaaggaagggatgaaatatgtgaacattggtcagggtatgatgctgatcaaccactacaaataccaagtctgggaggtgttcaaggataagttctccggacgtgtcgcgacatatgttgctgattggcaggacgaggagaatgttggatcaagggacagggctcctgggcttgggaccaaaccggttgaaccagaggattggccgagacgtttctgtgaagtatatgataacggtttgaaagattttgttcagaaagttttcacagacccacacactggaaatcttccatggtagattggtaaacactgtatttggtcttgcacagcacggcaccacaatacatgacatggagacacagacagggaaagaagaaccaaaaagaaattagatagaagagcgatttgctctttggtatattttttgaattttaaggtcttttgatcttttcttagttcattagaatcatcattttttgttacatatctaagaaggaaatgattcttttgtagataaagataggtagcacaattcattgtaagtttggttggggggagacaatcaatacaatcaatttcttgatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0121900, RefSeq:Os08g0121900