BGIOSGA017225

From RiceWiki
Revision as of 04:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017225| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017225, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017225, complete gene.

LocusTag

OSJNBA0063C18.16

Ensembl Transcript ID

BGIOSGA017225-TA

Ensembl Protein ID

BGIOSGA017225-PA

Length

4421

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31702005..31706425

Sequence Coding Region

31702005..31702165,31704391..31706425

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31702005..31706425 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31702005..31706425 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACTCGCAGAAGAAGCGCAGCCCCAAGATCGAGCCCTTCCGGCACCGCGTGGATGCGGACCCAAAGTCCTTCGACAAATCGTGGAAGAAGCTCGAGGACGCCATCCGCGAGATTTACAACCACAACGCCAGCGGCCTCTCCTTCGAGGAGCTGTACAGGACTGCTTATAACTTGGTTCTTCACAAGCATGGTCTGAAGCTATATGATAAACTCACAGAGAATTTAAAAGGACACCTGAAAGAAATGTGCAGATCAATAGGGGATGCCCAAGGTAGTTTGTTTCTGGAGGAACTGCAGAGAAGATGGGCTGATCACAATAAGGCACTACAAATGATCAGAGATATACTCATGTATATGGATAGGACATTTATTACAACTAACAAAAAGACACCTGTCTTTGACCTTGGTCTAGAGTTGTGGAGAGATATCGTTGTCCGCGCTCCCAAAATTCATGGGAGGTTGCTTGACACACTCCTTGAACTCATTCATAGAGAGAGGATGGGTGAGATGATAAACAGAGGTCTGATGAGGAGTACCACCAAAATGTTGATGGATCTAGGGTCTTCTGTCTATCATGATGACTTTGAGAAGCCATTCCTTGAGGTATCCGCAAGTTTCTATAGTGGTGAGTCACAACAGTTCATTGAGTGCTGTGATTGTGGCGAATATCTCAAGAAAGCTGAGAGACGGCTTGCTGAAGAGTTGGAGCGTGTTTCTCAGTATATGGATGCCAAAACTGCAGACAAAATAACTAGTGTTGTGGACACTGAGATGCTTGCAAATCACATGCAGCGGTTGATTCTTATGGAGAATTCTGGTCTTGTGAATATGCTTGTTGATGACAAACATGAAGACCTTAGCAGGATGTACAACTTGTTTAAACGTGTTCCTGATGGGCATTCAACAATTAGATCTGTGATGGCCTCTCATGTTAAGGAAAGTGGAAAGGCATTGGTATCTGACCCAGAGAAGATAAAGGACCCTGTTGAGTTTGTCCAGCGTCTTCTAAATGAGAAAGACAAGTATGATGAGATCATAAGTATTTCATTCAGCAATGACAAGGCTTTCCAAAATGCTCTGAATTCCTCCTTCGAGAATTTCATCAACTTGAACAACCGATCTCCTGAATTCATTTCGCTGTTTGTTGATGACAAGCTCCGGAAAGGGGTGAAAGGGGCCAATGAAGAGGATGTTGAAACTGTCTTGGACAAGGTGATGATGCTCTTCAGATATTTGCAGGAGAAAGATGTTTTTGAGAAATATTACAAGCAACACTTGGCCAAACGTCTTCTATCTGGGAAAACTACTTCTGATGAAGCTGAGAGGAGTATGCTTGTGAAGCTGAAGACGGAATGTGGCTACCAGTTTACGTCAAAATTGGAAGGCATGTTCAATGATCTAAAGACATCGCATGATACTATGCAAAGTTTTTATGCTAATCTCTCTGGTGATACTGATAGCCCAACAATATCAGTCCAGATACTCACCACTGGGTCTTGGCCAACACAGCCATGTACCCCCTGCAAACTTCCACCTGAAATTGTTGATATATCTGAGAAATTCCGGGCATTCTACCTTGGCACCCACAATGGCAGGAGATTGACATGGCAAACAAACATGGGGAATGCAGATATCAAAGCAACGTTCGGAGGCCGCAGGCATGAGTTGAATGTCTCGACATATCAGATGTGTGTCCTGATGCTGTTTAATTCAGCAGATGGCTTGACTTACGGTGACATTGAGCAGGCCACAGGTATACCACATGCTGATCTGAAACGCTGCCTCCAGTCTCTTGCTTGTGTTAAGGGTAAGAATGTGCTGCGGAAGGAACCCATGAGCAAGGATATATCTGAAGATGACACTTTCTACTACAATGACAAGTTCACAAGCAAGTTGGTCAAGGTGAAGATTGGCACCGTGGTTGCTCAGAAAGAAACAGAACCAGAGAAGTTGGAAACTCGCCAGAGAGTTGAGGAAGACAGGAAACCTCAAATTGAGGCTGCAATTGTCAGAATCATGAAGTCCAGAAGAGTCTTGGACCACAATAGCATAATCACGGAGGTGACAAAGCAGCTTCAATCGCGCTTTTTGCCAAATCCTGTTGTGATAAAGAAAAGAATAGAGTCCCTGATCGAGAGGGAGTTCTTGGAGAGGGACAAGGTAGATAGGAAGATGTACCGTTATCTTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MNSQKKRSPKIEPFRHRVDADPKSFDKSWKKLEDAIREIYNHNASGLSFEELYRTAYNLVLHKHGLKLYDKLTENLKGHLKEMCRSIGDAQGSLFLEELQRRWADHNKALQMIRDILMYMDRTFITTNKKTPVFDLGLELWRDIVVRAPKIHGRLLDTLLELIHRERMGEMINRGLMRSTTKMLMDLGSSVYHDDFEKPFLEVSASFYSGESQQFIECCDCGEYLKKAERRLAEELERVSQYMDAKTADKITSVVDTEMLANHMQRLILMENSGLVNMLVDDKHEDLSRMYNLFKRVPDGHSTIRSVMASHVKESGKALVSDPEKIKDPVEFVQRLLNEKDKYDEIISISFSNDKAFQNALNSSFENFINLNNRSPEFISLFVDDKLRKGVKGANEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTTSDEAERSMLVKLKTECGYQFTSKLEGMFNDLKTSHDTMQSFYANLSGDTDSPTISVQILTTGSWPTQPCTPCKLPPEIVDISEKFRAFYLGTHNGRRLTWQTNMGNADIKATFGGRRHELNVSTYQMCVLMLFNSADGLTYGDIEQATGIPHADLKRCLQSLACVKGKNVLRKEPMSKDISEDDTFYYNDKFTSKLVKVKIGTVVAQKETEPEKLETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIITEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKMYRYLA</aaseq>

Gene Sequence

<dnaseqindica>1..161#2387..4421#ATGAACTCGCAGAAGAAGCGCAGCCCCAAGATCGAGCCCTTCCGGCACCGCGTGGATGCGGACCCAAAGTCCTTCGACAAATCGTGGAAGAAGCTCGAGGACGCCATCCGCGAGATTTACAACCACAACGCCAGCGGCCTCTCCTTCGAGGAGCTGTACAGGTTGATAGATCTACGCCGCATCCCCTGCCTGATTTTTTTCTGTTTTATGCTAGGTTGATTTTGGCGCGGCGTCCCATGTGGGGGGCGGGGGATACGGGGAATCGAGTTTTGTATGAAACGCCAGCTCGATTAGTAGATTTAGTTTCTCACACTGTCATCGTTGGAGTCATTTTTTTTTCCTTAGGTTTTGCTGTATGATCATCTATGTATATAGATTGGATATTAGGCGATGTGCAGGGAGTTTCAAACGATTTTAATCGATCGGATATATGCTACATGCATGCCTATTAGGTAGTTCTGTGTATTGATATGTAAATTAGCTTGTCATTCAGAGATTAGAATGTGTTGACGCCATTGAATTGAAGTTGTTAATATAGCCCTAAATCTGGTAAATATGGTTGCGTGTATGCTGAGGCACCACTGTGAGTTTGTGACTACGGCACCTCCACTAGAGTTGAACTGTTGATTTTAGCAATGCTCTAGCTTAGTGTGTGCTGGTAGAATTATTAGGGGTATACTATTAAGCTGTTATAATTTTTGTCCCGTGGATGTGCTGTGTGATTAGAAAGCTGAATGTAAATTAGGCCATTCAATATGCTGGAGGCTGTTATGTGATTGGAAAGCTGGAGGTAATTGTTACATATTTAACATTCTAAGCTTGCTACATGGGTGATAATTTGTGTTACGTAAAGTACTTACGAAATTAAACTCTGGTCCCTGTGGAATTTGCAACCCTAGTTTCATGATTTGCATCCATTGTGCAGTAGAGAAAAGGAATTCCCTTATTTATGATCGATAATAGTGGTTCTCTGGAAATTGTAACGCTTTGGGGTCATGGGCTGTGGTGTAGTGATATTATCCGACATATGTACTGCACAGTGCACATGCCGTCTATTTCATGAAGGCCACATCTATGTATTACCCTATGGTAGGATTTTGTTCCCTCTCTTAAGCTTCAATGGATTCGAAATTTTCTTTAAGCCTGAAATATTGAATATAAGTCGGTCATATCTGCTTTGCTCCTATGATGTTTCTAGAATAGTGCTGGATAATTTTGTCTCCTCATAAGTTATTCTGGGTTGGAAGTTTGATACCCTTTGCATATGCCCTTTCAATCAATATGATATTTTATAGCTTAAAGGTAATCTATTTACTCTCTACTAGTGAGCATGCTGGTTAATCATTATTTCAAAACATATTTCATTGTTTTCTATATGCTACATTTCATCGTGGTGTTGTACGCATATGTGTCCTTATCTTAACAAACACTATCTTACCTGGTTTTAACCATCATAATCTACCCATTTATTATTGTGTAACTACTTAGCAAGTAGAAATAATAGTAACCACTAGAAAAGGAAAAATTGGCTATACTTAATAATGTTTCATATTCTAAAGATTTTCCCACTCTGCTAAAGATTTTCCCTGCCAAAATATAGTATTATTGTAGATTTATTAATTCATTAGTTTTGGTTGAGATAAGACATAGTGAGGTCCTTTCTTTTGAGAGTTTGGTGTATATATTCAAGGAACTTGATCTTCCTGGCAGTGCATTGTAGTGCTCTCTTTACCTGCGTAAGTTACAGCTGATAAAAATATCCCTTCTTTGTTTGGTCCTCTTCATTTTATTAGACACCAAAGACCAAAGATAGAAATTAGCTGATAAGCACCTTTCATGCATTGCTCTTGTTGGCCTTTTGTTTTGCAAGCTTAGGAAGTTAGGGGGACTCCACATTGTTCTGCTATATCCTCTTAATTAATAGTGTATGGCATGCAGCAGCACTTTTGCAATAATACTTTTTTTCGATTTCCATATGTTCCTCATTTACTGGTTATTATTGCTATTTCCAATTTAATAAGTACTCCAGGCTTGATATATAATTATAGACAAGTAATATTAATATAATATAACTCAATTTCAAAATTAATACAGTTAACTTTGTAGTTCCCTTCAATTATAGCTTTCCATTCCTGCAAGCTAAATTGTTGTCTGCTACATCCATCATCTGTTATCACTGCTATGCTTTCACGACATGGAGTAAAAACATTGTTTGAAAGCTTAGTATCATCTATGTGATAGTGCGGGTGACATTGTGTGTTTATTATTTGGGAGCTCTGCACATATAATAATATTAGCTAGATGTTGTATAAGGGTTACGAGAAAACTCCTCTATTTTAGTTTCTTCACTTAATTCTATATCATAATACTCCTTTTGTGTGATCAGGACTGCTTATAACTTGGTTCTTCACAAGCATGGTCTGAAGCTATATGATAAACTCACAGAGAATTTAAAAGGACACCTGAAAGAAATGTGCAGATCAATAGGGGATGCCCAAGGTAGTTTGTTTCTGGAGGAACTGCAGAGAAGATGGGCTGATCACAATAAGGCACTACAAATGATCAGAGATATACTCATGTATATGGATAGGACATTTATTACAACTAACAAAAAGACACCTGTCTTTGACCTTGGTCTAGAGTTGTGGAGAGATATCGTTGTCCGCGCTCCCAAAATTCATGGGAGGTTGCTTGACACACTCCTTGAACTCATTCATAGAGAGAGGATGGGTGAGATGATAAACAGAGGTCTGATGAGGAGTACCACCAAAATGTTGATGGATCTAGGGTCTTCTGTCTATCATGATGACTTTGAGAAGCCATTCCTTGAGGTATCCGCAAGTTTCTATAGTGGTGAGTCACAACAGTTCATTGAGTGCTGTGATTGTGGCGAATATCTCAAGAAAGCTGAGAGACGGCTTGCTGAAGAGTTGGAGCGTGTTTCTCAGTATATGGATGCCAAAACTGCAGACAAAATAACTAGTGTTGTGGACACTGAGATGCTTGCAAATCACATGCAGCGGTTGATTCTTATGGAGAATTCTGGTCTTGTGAATATGCTTGTTGATGACAAACATGAAGACCTTAGCAGGATGTACAACTTGTTTAAACGTGTTCCTGATGGGCATTCAACAATTAGATCTGTGATGGCCTCTCATGTTAAGGAAAGTGGAAAGGCATTGGTATCTGACCCAGAGAAGATAAAGGACCCTGTTGAGTTTGTCCAGCGTCTTCTAAATGAGAAAGACAAGTATGATGAGATCATAAGTATTTCATTCAGCAATGACAAGGCTTTCCAAAATGCTCTGAATTCCTCCTTCGAGAATTTCATCAACTTGAACAACCGATCTCCTGAATTCATTTCGCTGTTTGTTGATGACAAGCTCCGGAAAGGGGTGAAAGGGGCCAATGAAGAGGATGTTGAAACTGTCTTGGACAAGGTGATGATGCTCTTCAGATATTTGCAGGAGAAAGATGTTTTTGAGAAATATTACAAGCAACACTTGGCCAAACGTCTTCTATCTGGGAAAACTACTTCTGATGAAGCTGAGAGGAGTATGCTTGTGAAGCTGAAGACGGAATGTGGCTACCAGTTTACGTCAAAATTGGAAGGCATGTTCAATGATCTAAAGACATCGCATGATACTATGCAAAGTTTTTATGCTAATCTCTCTGGTGATACTGATAGCCCAACAATATCAGTCCAGATACTCACCACTGGGTCTTGGCCAACACAGCCATGTACCCCCTGCAAACTTCCACCTGAAATTGTTGATATATCTGAGAAATTCCGGGCATTCTACCTTGGCACCCACAATGGCAGGAGATTGACATGGCAAACAAACATGGGGAATGCAGATATCAAAGCAACGTTCGGAGGCCGCAGGCATGAGTTGAATGTCTCGACATATCAGATGTGTGTCCTGATGCTGTTTAATTCAGCAGATGGCTTGACTTACGGTGACATTGAGCAGGCCACAGGTATACCACATGCTGATCTGAAACGCTGCCTCCAGTCTCTTGCTTGTGTTAAGGGTAAGAATGTGCTGCGGAAGGAACCCATGAGCAAGGATATATCTGAAGATGACACTTTCTACTACAATGACAAGTTCACAAGCAAGTTGGTCAAGGTGAAGATTGGCACCGTGGTTGCTCAGAAAGAAACAGAACCAGAGAAGTTGGAAACTCGCCAGAGAGTTGAGGAAGACAGGAAACCTCAAATTGAGGCTGCAATTGTCAGAATCATGAAGTCCAGAAGAGTCTTGGACCACAATAGCATAATCACGGAGGTGACAAAGCAGCTTCAATCGCGCTTTTTGCCAAATCCTGTTGTGATAAAGAAAAGAATAGAGTCCCTGATCGAGAGGGAGTTCTTGGAGAGGGACAAGGTAGATAGGAAGATGTACCGTTATCTTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017225