Os08g0122000

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Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0122000| Description = Similar to Protein phosphatase 2A B' regulatory subunit| Version = NM_001067419.1 GI:115474574 GeneID:4344549| Lengt...")
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Gene Name

Os08g0122000

Description

Similar to Protein phosphatase 2A B' regulatory subunit

Version

NM_001067419.1 GI:115474574 GeneID:4344549

Length

3864 bp

Definition

Oryza sativa Japonica Group Os08g0122000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1204888..1208751

Sequence Coding Region

1205468..1205812,1207040..1208245

Expression

GEO Profiles:Os08g0122000

Genome Context

<gbrowseImage1> name=NC_008401:1204888..1208751 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1204888..1208751 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattaagcaaatcctgggccggcttcccaagaaggagaagccgggcaagtccggggagaaggatttggccggagtcggctcgtcgctgcctgatgcaagaaccaccacggatttgaccatgtctagtaggatcgccaatcctaacaattatacagccgcggtcacaaatcccggccagaattacaccgtcaagaacgcccatcatggtggtgctggtgtcagcaatggtttcttggcgccgcccgtgtttgaggcgcttccgagcttacgggatgcgccggcgccagagaagcccagcttgtttctccggaaggtggtcatgtgctatgtggttttcgacttcacggacccgaccaaggatgtcaaggagaaggagatcaagaggcaaacattgctggagctcgtggattatgtcacctcagctacggggaaattcccggagcccgctgtgcaggaggtcatcaaaatggtgtccaccaacttgttcagggtaccgaaccccgcgccaagagagaacaagccgcttgagtcatttgatatggaggaggaagaacctgtcatggacccggcttggccgcacttgcagattgtgtatgaactattcttaaggtttgtccagtctcctgagaccgatgctaagctggccaagagatacgtcgatcatggtttcattatcaagctgcttgatctctttgactcggaggatcctagggaaagggagtatttgaagacaatacttcataggatatatgggaagttcatggtgcaccgtccattcattaggaaggcgattaataatatcttctacaggttcatatttgagacagaaaagcataacgggattgctgagctattagagattttggggagtataatcaatggttttgctttgccactcaaggaagagcacaaattgtttcttgtgcgagcattgattccactccacaaaccaaaatgtgttagcatgtatcatcaacaactgtcatattgtgttactcagtttgttgagaaggactgcaagcttgcggatactgttataaggggtttacttaaatactggcccatcacgaatagtgctaaggaggtgatgtttttgggcgagttagaagaggttttggaagccactcagccagcagaatttcagagatgtatggtgtcacttttctgtcagatcgcccgctgtctgaatagttctcactttcaggtggcagagcgagctctgtttctgtggaacaacgaccatattgaggtcttgatcaagcagaacagcaaggtgatactgcccataatccttcctgcaatagaacgaaatacaaaagaacactggaaccaggcagttcaaagcttgagtcttaatgttcgcaagatattcatggatcatgaccctgtactgtttgaggagtgcctcaagaagtttgaggaagatgaagcaaaagaaaccgcgttgagatcaaaacgtgaggccacatggaagcgcctagaagagattgcctcgtcaaaaactatcagcagtgagccagcagttcctccagaggctacagttcattag</cdnaseq>

Protein Sequence

<aaseq>MIKQILGRLPKKEKPGKSGEKDLAGVGSSLPDARTTTDLTMSSR IANPNNYTAAVTNPGQNYTVKNAHHGGAGVSNGFLAPPVFEALPSLRDAPAPEKPSLF LRKVVMCYVVFDFTDPTKDVKEKEIKRQTLLELVDYVTSATGKFPEPAVQEVIKMVST NLFRVPNPAPRENKPLESFDMEEEEPVMDPAWPHLQIVYELFLRFVQSPETDAKLAKR YVDHGFIIKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFET EKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCVSMYHQQLSYCVTQ FVEKDCKLADTVIRGLLKYWPITNSAKEVMFLGELEEVLEATQPAEFQRCMVSLFCQI ARCLNSSHFQVAERALFLWNNDHIEVLIKQNSKVILPIILPAIERNTKEHWNQAVQSL SLNVRKIFMDHDPVLFEECLKKFEEDEAKETALRSKREATWKRLEEIASSKTISSEPA VPPEATVH</aaseq>

Gene Sequence

<dnaseqindica>2940..3284#507..1712#agttttctctcccattttggcttcgccccacccactgcctctctccccactgtgctcgcatcgcaggaagaacccgaccggcgacgcctcctccacggcgaaatccccatagttttctccacgaatcgatccaattcgcggcctttcccttccccctggggccaattcgcgtggaaattcgggaaaaaaaaggcgggatttttctgcctttttctttacccccctttccctttttgactctccgcacggttcttctttttattggtgtcactgattgtgtttctcgtggaaaaggcgcggttttaggggtcgtctcgatcgcggatttggctccggaggcgtcgatttgatcctagcaaggtgcggtttttttttttttgttttgtgctatatatgaggtgaattcgtttccctgcttcttacggcgttttaattaatttgatgatcagattgaggaatgatggattcgtgaattttgatcgagttgcttgtttggacgatccgttatgattaagcaaatcctgggccggcttcccaagaaggagaagccgggcaagtccggggagaaggatttggccggagtcggctcgtcgctgcctgatgcaagaaccaccacggatttgaccatgtctagtaggatcgccaatcctaacaattatacagccgcggtcacaaatcccggccagaattacaccgtcaagaacgcccatcatggtggtgctggtgtcagcaatggtttcttggcgccgcccgtgtttgaggcgcttccgagcttacgggatgcgccggcgccagagaagcccagcttgtttctccggaaggtggtcatgtgctatgtggttttcgacttcacggacccgaccaaggatgtcaaggagaaggagatcaagaggcaaacattgctggagctcgtggattatgtcacctcagctacggggaaattcccggagcccgctgtgcaggaggtcatcaaaatggtgtccaccaacttgttcagggtaccgaaccccgcgccaagagagaacaagccgcttgagtcatttgatatggaggaggaagaacctgtcatggacccggcttggccgcacttgcagattgtgtatgaactattcttaaggtttgtccagtctcctgagaccgatgctaagctggccaagagatacgtcgatcatggtttcattatcaagctgcttgatctctttgactcggaggatcctagggaaagggagtatttgaagacaatacttcataggatatatgggaagttcatggtgcaccgtccattcattaggaaggcgattaataatatcttctacaggttcatatttgagacagaaaagcataacgggattgctgagctattagagattttggggagtataatcaatggttttgctttgccactcaaggaagagcacaaattgtttcttgtgcgagcattgattccactccacaaaccaaaatgtgttagcatgtatcatcaacaactgtcatattgtgttactcagtttgttgagaaggactgcaagcttgcggatactgttataaggggtttacttaaatactggcccatcacgaatagtgctaaggaggtgatgtttttgggcgagttagaagaggttttggaagccactcagccagcagaatttcagagatgtatggtgtcacttttctgtcagatcgcccgctgtctgaatagttctcactttcaggtaaaaatgaattttactgaatggcagttaaaccataagcatgtaatattgtttttgctagttgttgtatgcttgtgcattcagttcttgtcaatgttgatatggaaataggcatttatcattttaaaactatttattagattatctatcagatggaataccaatattacagatagcatggccatttcagcgatccacattccacggttgatttctttccaacagccaatacatgtatttcagcacacaagtcgtaccaattatggttattctttatagagttgggctgttgattattaccatgtttgctatatgatagccagatagcctgttggcacaattttggaccaatacaagatagggctgttaaatgcccaaagtatttactatatgaatcctgggctcctcactaaagtacataccaatttgtgaatccatactaaaattctatcacattacccttccatgtaactgtagctgacaatttttatcctttgaattgctgttttgcactaacacatggatctcatattaaatgatcatttacaatgtatacttcaagaaacgtgtccatgcatgcttctgtgttatgtttatgcagtttcttttgtctgctgataataccatcctttttttggatttatggtatgctgttcactttcttctgagaagtggagatgtatatcctaaagttaggatgtaccaccggttgagacggttggttttcacaaacaaaatcggtggaggctgagatgattaggtctagggagagatcatttttcttgccataatgttgccaaaaaaactgaaaccaaatttaaatttttatgtgaaaaagagatgaagctggcatcgacaggactcgaaccacagaacttaccctgtatagtagtaagagctaccgctaggcttgtttgtatatacaatttaaattaaaaaaaattcccctggtatgcaattgtttcggacccatccaagatgacaagatattggtgaaatttcactgagatcctgatccatggatgtgtgatattatatgtattttactagttggcgtttgagaatgaccatcagctacttgatcatttgcttgatgatcaaattgtgttgtgtttaagtttttgtgataaacgaaacttaagctttttaattttctagtgaccccatgctacctgtttgtcatagaaggtaatggcgtattgattcttattttttcttgttttgcaggtggcagagcgagctctgtttctgtggaacaacgaccatattgaggtcttgatcaagcagaacagcaaggtgatactgcccataatccttcctgcaatagaacgaaatacaaaagaacactggaaccaggcagttcaaagcttgagtcttaatgttcgcaagatattcatggatcatgaccctgtactgtttgaggagtgcctcaagaagtttgaggaagatgaagcaaaagaaaccgcgttgagatcaaaacgtgaggccacatggaagcgcctagaagagattgcctcgtcaaaaactatcagcagtgagccagcagttcctccagaggctacagttcattagcagcgctcctcagcgttgcttgctgaatgctgacgtcgtatgagcagctcgtttgccagatctagttagatcactgatgtgaatgctcatggattcctgcatgcctcatgttacttgctcctgaacattttcgcaggctgacttgtatatacaaggtagatgatggacttcgaatcttcaacagggctcagagctgtgtctgttccgagatcgtagcacctgttcttcgccgtgggacaaaggaaaggaggcagattatgtccttgcttttctgagatgtatgtgctagcctgctaggggtcaaggtgcagactggagctcagtgccctgatgttgaggacggttagcagcacatgagagagtagcaagtaggaacagagtttgcttgttgatcatggttttgcagaaatacaatgtttttatgtatgaataacttcgagtcttatcatgataatatgtaccccgggtgtacatgtgtttgctttttctagatgtatacagaaatttgtaacgaggaatgcttcctgcttgcatcaatcgatgcagagttgctgactggtggtcaatttggaattattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0122000, RefSeq:Os08g0122000