BGIOSGA017235

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017235| Description = Japonica Group Os04g0644700 (Os04g0644700) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA017235, complete gene....")
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Gene Name

BGIOSGA017235

Description

Japonica Group Os04g0644700 (Os04g0644700) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA017235, complete gene.

LocusTag

NM_001060595.1

Ensembl Transcript ID

BGIOSGA017235-TA

Ensembl Protein ID

BGIOSGA017235-PA

Length

2055

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31803023..31805077

Sequence Coding Region

31803023..31803205,31803641..31803733,31803843..31803994,31804211..31804346,31804456..31804611
,31804742..31804821,31804984..31805077

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31803023..31805077 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31803023..31805077 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGTGCGGCGTCGCCGGACCACCTGTTCGGCCTTCGCTACAGCTTCTACGTCGGCGCGTACCAGGCCGTCATCACCGGCGTCCAGGCCATCCCCGCGCGCGCTGCCCTCTCCCCCGACGCCCTCGCCGAGCGCGACTCCCTCCTCTACCGCTCCTACATCGCCATCGGCTCCCACCAGCTGGTGATCGACGAGATCGGGCCGGGCGCGGCCACGCCGCTCCAGGCCGTCAGGTTGCTCACGGTGTATCTCTCCGGCGGCGCCGGCGGCAAGGAATCCGCGATCAGGAAGCTGAACGAGCTCCTGGCAGATGATGCGGTGGGGAGCAACCCGATTCTCCGGCTGGTTGCAGGGACGGTTCTCATGCACGAGCGGGACTATGCCGGAGCACTGAAGCACACAAATTCTGGTGGGACTATGGAATTGCTTGCGATGAATGTTCAGATATGCCTCCAGATGCACAGGTCTGATCACGCAGAGAAACAGCTGAGGATAATGCAGCAATTGGACGAAGACCACACACTGACGCAGCTCGCAAACGCATGGGTAGACCTTGTCATGGGCGGGTCCAAGATCCAAGAAGCGCACCTCATCTTCCAGGACTTGTCAGAGAAGTACCCAGCAACTTGCTTAATTCTTAATGGTAAAGCACTGTGCCTGATGCACATGGGTAACTTTGAAGATGCAGAGGGATTGCTGCTGGAATCACTGAACAAGGATGCCAAGGATGCAGAAACTCTAGCCAACCTCGTTGTGTGCAGTCTGAACCTAGGAAAGTCTGCATCCCGCTACCTGAACCAACTGAAGCTGGCACACCCAGACCATATGCTGGTTAAGCGAATGTCCTCTGCTGAAGACAGTTTCGACAGAGCCTGCCAAGCGATATCATGA</cdnaseq>

Protein Sequence

<aaseq>MAGAASPDHLFGLRYSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDEIGPGAATPLQAVRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS</aaseq>

Gene Sequence

<dnaseqindica>1..183#619..711#821..972#1189..1324#1434..1589#1720..1799#1962..2055#ATGGCGGGTGCGGCGTCGCCGGACCACCTGTTCGGCCTTCGCTACAGCTTCTACGTCGGCGCGTACCAGGCCGTCATCACCGGCGTCCAGGCCATCCCCGCGCGCGCTGCCCTCTCCCCCGACGCCCTCGCCGAGCGCGACTCCCTCCTCTACCGCTCCTACATCGCCATCGGCTCCCACCAGGTACGTACGCATCGCGTGCACGTGTCCATCGATCGATTGATCACGCCCTGTGTGTTGGATGAGAAAATTGGCGTAATATCATCGTCAAACAGGGTTTCGCTCAAATACTACTGAGCAGTTGGAATTCGTCGCTGAAACACCATTTTCTTCCAATTCTCTCTTTCCTCTTATTTTTTCTGACCAAAATACCCCTAGTTGAATTAATTAATTTTACTAGAGGTATTTTTTTAAAGTAATTATGAGAGAAAAGAGAGAATTCGAAGAAAATGACATGAGCGAAGCCCCTCAATTGATAATGGTATTTCGGCGAATCTCAACTGCATAGTGGTATTTGGGCGAAAATCCTTTTAGACAATGGTAAAATGACAATTTTCTCGTGTTGGATGACCTAGCTGATCGACTCGTCGAGCGGTTGGTTTCTCGTGTGAAATGCAGCTGGTGATCGACGAGATCGGGCCGGGCGCGGCCACGCCGCTCCAGGCCGTCAGGTTGCTCACGGTGTATCTCTCCGGCGGCGCCGGCGGCAAGGTTACTCCTGTTGTTGTTTCATCCGCGCGTGCATTTCAATTTGGATCCAATTAATTACCGCGCTATATATCTCATTGTGCGTTTTGTAATCAATCTCTGTGTAATTAAGGAATCCGCGATCAGGAAGCTGAACGAGCTCCTGGCAGATGATGCGGTGGGGAGCAACCCGATTCTCCGGCTGGTTGCAGGGACGGTTCTCATGCACGAGCGGGACTATGCCGGAGCACTGAAGCACACAAATTCTGGTGGGACTATGGAATTGTAAGGATCATCCAACCTTCCATGTAACTTTTGATCCATTCTGCACAGTATCTTATTTTTACCCCATGTGTTGTTCCATGATTGATACGATTGCCTGCTCGCATAAGAATTATATATAGCTGAAGATTTCCATGCCATCAGAGAATTACTGCATGTTATGTTTTACCATTGGGAAGACTGAAGTCACTGAACCGATTCACGTCTGGTGTTTTTCAGGCTTGCGATGAATGTTCAGATATGCCTCCAGATGCACAGGTCTGATCACGCAGAGAAACAGCTGAGGATAATGCAGCAATTGGACGAAGACCACACACTGACGCAGCTCGCAAACGCATGGGTAGACCTTGTCATGGTAGGAATACTATGGGTTGTTACTTGAGAGTTGTTTATGATGATAAATCAAAGAGGCAGGAGAGAAATCTGAGTTCTACTGCTTCCCATTGCTTCTGATTCTATACCAGGGCGGGTCCAAGATCCAAGAAGCGCACCTCATCTTCCAGGACTTGTCAGAGAAGTACCCAGCAACTTGCTTAATTCTTAATGGTAAAGCACTGTGCCTGATGCACATGGGTAACTTTGAAGATGCAGAGGGATTGCTGCTGGAATCACTGAACAAGGTCAGTTCTAATGATGTTTTTAGATCAAAAGTTCTAATGATGTTAACCTGTCCATCTGAGCATTTGCTCTAGATAATCTACTTCTCAAACAGAGTGTTAGTGCTTAACAAAAAATGGTCAAACTGTTCAGGATGCCAAGGATGCAGAAACTCTAGCCAACCTCGTTGTGTGCAGTCTGAACCTAGGAAAGTCTGCATCCCGCTACCTGAAGTAAGTGGGTTCTACACTGTTATATTTTCATTTTGAAGGCCATTTCCTAATGCCTTGTCTTATTTCTGCCTGATAAGTCAAGATGTCAAGGCTCTAATAATTGTTATATTTCTGTACAATTTGAGCGCTTAATCTGAACTGTAATTCTGATAACCGTTGCAGCCAACTGAAGCTGGCACACCCAGACCATATGCTGGTTAAGCGAATGTCCTCTGCTGAAGACAGTTTCGACAGAGCCTGCCAAGCGATATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017235